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CATH Classification

Domain Context

CATH Clusters

Superfamily Integrase, C-terminal domain superfamily, retroviral
Functional Family

Enzyme Information

3.1.-.-
Acting on ester bonds.
based on mapping to UniProt P03354
3.4.23.-
Aspartic endopeptidases.
based on mapping to UniProt P03354
3.1.26.4
Ribonuclease H.
based on mapping to UniProt P03354
Endonucleolytic cleavage to 5'-phosphomonoester.
-!- Acts on RNA-DNA hybrids.
2.7.7.49
RNA-directed DNA polymerase.
based on mapping to UniProt P03354
Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).
-!- Catalyzes RNA-template-directed extension of the 3'-end of a DNA strand by one deoxynucleotide at a time. -!- Cannot initiate a chain de novo. -!- Requires a RNA or DNA primer. -!- DNA can also serve as template. -!- See also EC 2.7.7.7.
2.7.7.-
Nucleotidyltransferases.
based on mapping to UniProt P03354
2.7.7.7
DNA-directed DNA polymerase.
based on mapping to UniProt P03354
Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).
-!- Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. -!- Cannot initiate a chain de novo. -!- Requires a primer which may be DNA or RNA. -!- See also EC 2.7.7.49.

UniProtKB Entries (1)

P03354
POL_RSVP
Rous sarcoma virus - Prague C
Gag-Pol polyprotein

PDB Structure

PDB 1C0M
External Links
Method X-RAY DIFFRACTION
Organism Escherichia
Primary Citation
Crystal structure of an active two-domain derivative of Rous sarcoma virus integrase.
Yang, Z.N., Mueser, T.C., Bushman, F.D., Hyde, C.C.
J.Mol.Biol.
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