PDB 6i1y

PDB Links
Overview

PDB Information

PDB	6I1Y
Method	ELECTRON MICROSCOPY
Host Organism	Cell-free gateway cloning vector N-term 8xHis pCellFree_G01
Gene Source	Vibrio vulnificus
Primary Citation	Structure and assembly of pilotin-dependent and -independent secretins of the type II secretion system. Howard, S.P., Estrozi, L.F., Bertrand, Q., Contreras-Martel, C., Strozen, T., Job, V., Martins, A., Fenel, D., Schoehn, G., Dessen, A. Plos Pathog.
Header	Protein Transport
Released	2018-10-30
Resolution	3.400
CATH Insert Date	14 Apr, 2019

PDB Images (76)

6i1y

PDB 6i1y

6i1yA

PDB Chain 6i1yA

6i1yB

PDB Chain 6i1yB

6i1yC

PDB Chain 6i1yC

6i1yD

PDB Chain 6i1yD

6i1yE

PDB Chain 6i1yE

6i1yF

PDB Chain 6i1yF

6i1yG

PDB Chain 6i1yG

6i1yH

PDB Chain 6i1yH

6i1yI

PDB Chain 6i1yI

6i1yJ

PDB Chain 6i1yJ

6i1yK

PDB Chain 6i1yK

6i1yL

PDB Chain 6i1yL

6i1yM

PDB Chain 6i1yM

6i1yN

PDB Chain 6i1yN

6i1yO

PDB Chain 6i1yO

6i1yA01

CATH Domain 6i1yA01

6i1yA02

CATH Domain 6i1yA02

6i1yA03

CATH Domain 6i1yA03

6i1yA04

CATH Domain 6i1yA04

6i1yB01

CATH Domain 6i1yB01

6i1yB02

CATH Domain 6i1yB02

6i1yB03

CATH Domain 6i1yB03

6i1yB04

CATH Domain 6i1yB04

6i1yC01

CATH Domain 6i1yC01

6i1yC02

CATH Domain 6i1yC02

6i1yC03

CATH Domain 6i1yC03

6i1yC04

CATH Domain 6i1yC04

6i1yD01

CATH Domain 6i1yD01

6i1yD02

CATH Domain 6i1yD02

6i1yD03

CATH Domain 6i1yD03

6i1yD04

CATH Domain 6i1yD04

6i1yE01

CATH Domain 6i1yE01

6i1yE02

CATH Domain 6i1yE02

6i1yE03

CATH Domain 6i1yE03

6i1yE04

CATH Domain 6i1yE04

6i1yF01

CATH Domain 6i1yF01

6i1yF02

CATH Domain 6i1yF02

6i1yF03

CATH Domain 6i1yF03

6i1yF04

CATH Domain 6i1yF04

6i1yG01

CATH Domain 6i1yG01

6i1yG02

CATH Domain 6i1yG02

6i1yG03

CATH Domain 6i1yG03

6i1yG04

CATH Domain 6i1yG04

6i1yH01

CATH Domain 6i1yH01

6i1yH02

CATH Domain 6i1yH02

6i1yH03

CATH Domain 6i1yH03

6i1yH04

CATH Domain 6i1yH04

6i1yI01

CATH Domain 6i1yI01

6i1yI02

CATH Domain 6i1yI02

6i1yI03

CATH Domain 6i1yI03

6i1yI04

CATH Domain 6i1yI04

6i1yJ01

CATH Domain 6i1yJ01

6i1yJ02

CATH Domain 6i1yJ02

6i1yJ03

CATH Domain 6i1yJ03

6i1yJ04

CATH Domain 6i1yJ04

6i1yK01

CATH Domain 6i1yK01

6i1yK02

CATH Domain 6i1yK02

6i1yK03

CATH Domain 6i1yK03

6i1yK04

CATH Domain 6i1yK04

6i1yL01

CATH Domain 6i1yL01

6i1yL02

CATH Domain 6i1yL02

6i1yL03

CATH Domain 6i1yL03

6i1yL04

CATH Domain 6i1yL04

6i1yM01

CATH Domain 6i1yM01

6i1yM02

CATH Domain 6i1yM02

6i1yM03

CATH Domain 6i1yM03

6i1yM04

CATH Domain 6i1yM04

6i1yN01

CATH Domain 6i1yN01

6i1yN02

CATH Domain 6i1yN02

6i1yN03

CATH Domain 6i1yN03

6i1yN04

CATH Domain 6i1yN04

6i1yO01

CATH Domain 6i1yO01

6i1yO02

CATH Domain 6i1yO02

6i1yO03

CATH Domain 6i1yO03

6i1yO04

CATH Domain 6i1yO04

PDB Prints

PDB Chains (15)

Chain ID	Date inserted into CATH	CATH Status
A	14 Apr, 2019	Chopped
B	14 Apr, 2019	Chopped
C	14 Apr, 2019	Chopped
D	14 Apr, 2019	Chopped
E	14 Apr, 2019	Chopped
F	14 Apr, 2019	Chopped
G	14 Apr, 2019	Chopped
H	14 Apr, 2019	Chopped
I	14 Apr, 2019	Chopped
J	14 Apr, 2019	Chopped
K	14 Apr, 2019	Chopped
L	14 Apr, 2019	Chopped
M	14 Apr, 2019	Chopped
N	14 Apr, 2019	Chopped
O	14 Apr, 2019	Chopped

CATH Domains (60)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
6i1yA01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yA02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yA03	15 Apr, 2019		Holding pen
6i1yA04	15 Apr, 2019		Holding pen
6i1yB01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yB02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yB03	15 Apr, 2019		Holding pen
6i1yB04	15 Apr, 2019		Holding pen
6i1yC01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yC02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yC03	15 Apr, 2019		Holding pen
6i1yC04	15 Apr, 2019		Holding pen
6i1yD01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yD02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yD03	15 Apr, 2019		Holding pen
6i1yD04	15 Apr, 2019		Holding pen
6i1yE01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yE02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yE03	15 Apr, 2019		Holding pen
6i1yE04	15 Apr, 2019		Holding pen
6i1yF01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yF02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yF03	15 Apr, 2019		Holding pen
6i1yF04	15 Apr, 2019		Holding pen
6i1yG01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yG02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yG03	15 Apr, 2019		Holding pen
6i1yG04	15 Apr, 2019		Holding pen
6i1yH01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yH02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yH03	15 Apr, 2019		Holding pen
6i1yH04	15 Apr, 2019		Holding pen
6i1yI01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yI02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yI03	15 Apr, 2019		Holding pen
6i1yI04	15 Apr, 2019		Holding pen
6i1yJ01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yJ02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yJ03	15 Apr, 2019		Holding pen
6i1yJ04	15 Apr, 2019		Holding pen
6i1yK01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yK02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yK03	15 Apr, 2019		Holding pen
6i1yK04	15 Apr, 2019		Holding pen
6i1yL01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yL02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yL03	15 Apr, 2019		Holding pen
6i1yL04	15 Apr, 2019		Holding pen
6i1yM01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yM02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yM03	15 Apr, 2019		Holding pen
6i1yM04	15 Apr, 2019		Holding pen
6i1yN01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yN02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yN03	15 Apr, 2019		Holding pen
6i1yN04	15 Apr, 2019		Holding pen
6i1yO01	15 Apr, 2019	3.30.1370.120	Assigned
6i1yO02	15 Apr, 2019	3.30.1370.120	Assigned
6i1yO03	15 Apr, 2019		Holding pen
6i1yO04	15 Apr, 2019		Holding pen

UniProtKB Entries (15)

Accession	Gene ID	Taxon	Description
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD
A0A087IFK6	A0A087IFK6_VIBVL	Vibrio vulnificus	General secretion pathway protein GspD