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PDB 6gml

PDB Information

PDB6GML
MethodELECTRON MICROSCOPY
Host OrganismTrichoplusia ni
Gene SourceHomo sapiens
Primary Citation
Structure of paused transcription complex Pol II-DSIF-NELF.
Vos, S.M., Farnung, L., Urlaub, H., Cramer, P.
Nature
HeaderTranscription
Released2018-05-27
Resolution3.200
CATH Insert Date09 Sep, 2018

PDB Images (35)

PDB Prints

PDB Chains (21)

Chain ID Date inserted into CATH CATH Status
A 09 Sep, 2018 Holding pen
B 09 Sep, 2018 Holding pen
C 09 Sep, 2018 Chopped
D 09 Sep, 2018 Chopped
E 09 Sep, 2018 Chopped
F 09 Sep, 2018 Chopped
G 09 Sep, 2018 Chopped
H 09 Sep, 2018 Chopped
I 09 Sep, 2018 Holding pen
J 09 Sep, 2018 Chopped
K 09 Sep, 2018 Chopped
L 09 Sep, 2018 Chopped
N 09 Sep, 2018 Rejected
P 09 Sep, 2018 Rejected
T 09 Sep, 2018 Rejected
U 09 Sep, 2018 Holding pen
V 09 Sep, 2018 Write scan list
W 09 Sep, 2018 Holding pen
X 09 Sep, 2018 Rejected
Y 09 Sep, 2018 Chopped
Z 09 Sep, 2018 Holding pen

CATH Domains (13)

Domain ID Date inserted into CATH Superfamily CATH Status
6gmlC01 10 Sep, 2018 3.30.1360.10 Assigned
6gmlC02 10 Sep, 2018 2.170.120.12 Assigned
6gmlD00 10 Sep, 2018 1.20.1250.40 Assigned
6gmlE01 10 Sep, 2018 3.40.1340.10 Assigned
6gmlE02 10 Sep, 2018 3.90.940.20 Assigned
6gmlF00 10 Sep, 2018 3.90.940.10 Assigned
6gmlG01 10 Sep, 2018 3.30.1490.120 Assigned
6gmlG02 10 Sep, 2018 2.40.50.140 Assigned
6gmlH01 10 Sep, 2018 2.40.50.140 Assigned
6gmlJ00 10 Sep, 2018 1.10.10.60 Assigned
6gmlK00 10 Sep, 2018 3.30.1360.10 Assigned
6gmlL00 10 Sep, 2018 2.20.28.30 Assigned
6gmlY01 10 Sep, 2018 3.30.40.210 Assigned

UniProtKB Entries (15)

Accession Gene ID Taxon Description
A0A287ADR4 A0A287ADR4_PIG Sus scrofa DNA-directed RNA polymerase II subunit RPB4
I3LJZ9 I3LJZ9_PIG Sus scrofa Uncharacterized protein
I3LSI7 I3LSI7_PIG Sus scrofa Uncharacterized protein
I3LJR4 I3LJR4_PIG Sus scrofa DNA-directed RNA polymerase subunit
F1RKE4 F1RKE4_PIG Sus scrofa DNA-directed RNA polymerase II subunit RPB11-a
I3LN51 I3LN51_PIG Sus scrofa Uncharacterized protein
A0A287B432 A0A287B432_PIG Sus scrofa Uncharacterized protein
O00267 SPT5H_HUMAN Homo sapiens Transcription elongation factor SPT5
F1SKN8 F1SKN8_PIG Sus scrofa Uncharacterized protein
I3LCH3 I3LCH3_PIG Sus scrofa DNA-directed RNA polymerase II subunit RPB3
I3LGP4 I3LGP4_PIG Sus scrofa DNA-directed RNA polymerase subunit beta
I3LCB2 I3LCB2_PIG Sus scrofa DNA-directed RNA polymerases I, II, and III subunit RPABC3
P60899 RPB9_PIG Sus scrofa DNA-directed RNA polymerase II subunit RPB9
P63272 SPT4H_HUMAN Homo sapiens Transcription elongation factor SPT4
P18615 NELFE_HUMAN Homo sapiens Negative elongation factor E
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