PDB 6erf

PDB Information

PDB6ERF
MethodX-RAY DIFFRACTION
Host OrganismSpodoptera frugiperda
Gene SourceHomo sapiens
Primary Citation
XLF and APLF bind Ku80 at two remote sites to ensure DNA repair by non-homologous end joining.
Nemoz, C., Ropars, V., Frit, P., Gontier, A., Drevet, P., Yu, J., Guerois, R., Pitois, A., Comte, A., Delteil, C., Barboule, N., Legrand, P., Baconnais, S., Yin, Y., Tadi, S., Barbet-Massin, E., Berger, I., Le Cam, E., Modesti, M., Rothenberg, E., Calsou, P., Charbonnier, J.B.
Nat. Struct. Mol. Biol.
HeaderDna Binding Protein
Released2017-10-18
Resolution3.010
CATH Insert Date16 Dec, 2018

PDB Images (43)

PDB Prints

PDB Chains (20)

Chain ID Date inserted into CATH CATH Status
A 16 Dec, 2018 Chopped
B 16 Dec, 2018 Chopped
C 16 Dec, 2018 Chopped
D 16 Dec, 2018 Chopped
E 16 Dec, 2018 Chopped
F 16 Dec, 2018 Holding pen
G 16 Dec, 2018 Chopped
H 16 Dec, 2018 Holding pen
I 16 Dec, 2018 Rejected
J 16 Dec, 2018 Rejected
K 16 Dec, 2018 Rejected
L 16 Dec, 2018 Rejected
M 16 Dec, 2018 Rejected
N 16 Dec, 2018 Rejected
O 16 Dec, 2018 Rejected
P 16 Dec, 2018 Rejected
Q 16 Dec, 2018 Rejected
R 16 Dec, 2018 Rejected
S 16 Dec, 2018 Rejected
T 16 Dec, 2018 Rejected

CATH Domains (22)

Domain ID Date inserted into CATH Superfamily CATH Status
6erfA01 27 Feb, 2019 3.40.50.410 Assigned
6erfA02 27 Feb, 2019 2.40.290.10 Assigned
6erfA03 27 Feb, 2019 4.10.970.10 Assigned
6erfA04 27 Feb, 2019 1.10.1600.10 Assigned
6erfB01 27 Feb, 2019 3.40.50.410 Assigned
6erfB02 27 Feb, 2019 2.40.290.10 Assigned
6erfB03 27 Feb, 2019 1.10.1600.10 Assigned
6erfC01 28 Feb, 2019 3.40.50.410 Assigned
6erfC02 28 Feb, 2019 2.40.290.10 Assigned
6erfC03 28 Feb, 2019 4.10.970.10 Assigned
6erfC04 28 Feb, 2019 1.10.1600.10 Assigned
6erfD01 28 Feb, 2019 3.40.50.410 Assigned
6erfD02 28 Feb, 2019 2.40.290.10 Assigned
6erfD03 28 Feb, 2019 1.10.1600.10 Assigned
6erfE01 28 Feb, 2019 3.40.50.410 Assigned
6erfE02 28 Feb, 2019 2.40.290.10 Assigned
6erfE03 28 Feb, 2019 4.10.970.10 Assigned
6erfE04 28 Feb, 2019 1.10.1600.10 Assigned
6erfG01 28 Feb, 2019 3.40.50.410 Assigned
6erfG02 28 Feb, 2019 2.40.290.10 Assigned
6erfG03 28 Feb, 2019 4.10.970.10 Assigned
6erfG04 28 Feb, 2019 1.10.1600.10 Assigned

UniProtKB Entries (12)

Accession Gene ID Taxon Description
P12956 XRCC6_HUMAN Homo sapiens X-ray repair cross-complementing protein 6
P13010 XRCC5_HUMAN Homo sapiens X-ray repair cross-complementing protein 5
P13010 XRCC5_HUMAN Homo sapiens X-ray repair cross-complementing protein 5
P12956 XRCC6_HUMAN Homo sapiens X-ray repair cross-complementing protein 6
Q8IW19 APLF_HUMAN Homo sapiens Aprataxin and PNK-like factor
Q8IW19 APLF_HUMAN Homo sapiens Aprataxin and PNK-like factor
Q8IW19 APLF_HUMAN Homo sapiens Aprataxin and PNK-like factor
P12956 XRCC6_HUMAN Homo sapiens X-ray repair cross-complementing protein 6
P13010 XRCC5_HUMAN Homo sapiens X-ray repair cross-complementing protein 5
Q8IW19 APLF_HUMAN Homo sapiens Aprataxin and PNK-like factor
P12956 XRCC6_HUMAN Homo sapiens X-ray repair cross-complementing protein 6
P13010 XRCC5_HUMAN Homo sapiens X-ray repair cross-complementing protein 5