PDB 6bqf

PDB Information

PDB6BQF
MethodX-RAY DIFFRACTION
Host OrganismSaccharomyces cerevisiae
Gene SourceSaccharomyces cerevisiae (strain ATCC 204508 / S288c)
Primary Citation
Structural basis of transcriptional stalling and bypass of abasic DNA lesion by RNA polymerase II.
Wang, W., Walmacq, C., Chong, J., Kashlev, M., Wang, D.
Proc. Natl. Acad. Sci. U.S.A.
HeaderTransferase/Transcription
Released2017-11-27
Resolution3.350
CATH Insert Date03 Jun, 2018

PDB Images (22)

PDB Prints

PDB Chains (12)

Chain ID Date inserted into CATH CATH Status
A 03 Jun, 2018 Holding pen
B 03 Jun, 2018 Holding pen
C 03 Jun, 2018 Chopped
E 03 Jun, 2018 Chopped
F 03 Jun, 2018 Chopped
H 03 Jun, 2018 Chopped
I 03 Jun, 2018 Holding pen
J 03 Jun, 2018 Chopped
K 03 Jun, 2018 Chopped
L 03 Jun, 2018 Chopped
R 03 Jun, 2018 Rejected
T 03 Jun, 2018 Rejected

CATH Domains (9)

Domain ID Date inserted into CATH Superfamily CATH Status
6bqfC01 28 Jun, 2018 3.30.1360.10 Assigned
6bqfC02 28 Jun, 2018 2.170.120.12 Assigned
6bqfE01 28 Jun, 2018 3.40.1340.10 Assigned
6bqfE02 28 Jun, 2018 3.90.940.20 Assigned
6bqfF00 28 Jun, 2018 3.90.940.10 Assigned
6bqfH00 28 Jun, 2018 2.40.50.140 Assigned
6bqfJ00 28 Jun, 2018 1.10.10.60 Assigned
6bqfK00 28 Jun, 2018 3.30.1360.10 Assigned
6bqfL00 28 Jun, 2018 2.20.28.30 Assigned

UniProtKB Entries (10)

Accession Gene ID Taxon Description
P27999 RPB9_YEAST Saccharomyces cerevisiae S288C DNA-directed RNA polymerase II subunit RPB9
P20435 RPAB2_YEAST Saccharomyces cerevisiae S288C DNA-directed RNA polymerases I, II, and III subunit RPABC2
P40422 RPAB4_YEAST Saccharomyces cerevisiae S288C DNA-directed RNA polymerases I, II, and III subunit RPABC4
P20434 RPAB1_YEAST Saccharomyces cerevisiae S288C DNA-directed RNA polymerases I, II, and III subunit RPABC1
P20436 RPAB3_YEAST Saccharomyces cerevisiae S288C DNA-directed RNA polymerases I, II, and III subunit RPABC3
P22139 RPAB5_YEAST Saccharomyces cerevisiae S288C DNA-directed RNA polymerases I, II, and III subunit RPABC5
P04050 RPB1_YEAST Saccharomyces cerevisiae S288C DNA-directed RNA polymerase II subunit RPB1
P08518 RPB2_YEAST Saccharomyces cerevisiae S288C DNA-directed RNA polymerase II subunit RPB2
P38902 RPB11_YEAST Saccharomyces cerevisiae S288C DNA-directed RNA polymerase II subunit RPB11
P16370 RPB3_YEAST Saccharomyces cerevisiae S288C DNA-directed RNA polymerase II subunit RPB3