PDB 5z2r

PDB Information

PDB5Z2R
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli
Gene SourceEscherichia coli (strain K12)
Primary Citation
Two active site arginines are critical determinants of substrate binding and catalysis in MenD: a thiamine-dependent enzyme in menaquinone biosynthesis.
Qin, M.M., Song, H.G., Dai, X., Chen, Y.Z., Guo, Z.H.
Biochem. J.
HeaderTransferase
Released2018-01-03
Resolution2.300
CATH Insert Date16 Dec, 2018

PDB Images (33)

PDB Prints

PDB Chains (8)

Chain ID Date inserted into CATH CATH Status
A 16 Dec, 2018 Chopped
B 16 Dec, 2018 Chopped
C 16 Dec, 2018 Chopped
D 16 Dec, 2018 Chopped
E 16 Dec, 2018 Chopped
F 16 Dec, 2018 Chopped
G 16 Dec, 2018 Chopped
H 16 Dec, 2018 Chopped

CATH Domains (24)

Domain ID Date inserted into CATH Superfamily CATH Status
5z2rA01 28 Feb, 2019 3.40.50.970 Assigned
5z2rA02 28 Feb, 2019 3.40.50.1220 Assigned
5z2rA03 28 Feb, 2019 3.40.50.970 Assigned
5z2rB01 28 Feb, 2019 3.40.50.970 Assigned
5z2rB02 28 Feb, 2019 3.40.50.1220 Assigned
5z2rB03 28 Feb, 2019 3.40.50.970 Assigned
5z2rC01 28 Feb, 2019 3.40.50.970 Assigned
5z2rC02 28 Feb, 2019 3.40.50.1220 Assigned
5z2rC03 28 Feb, 2019 3.40.50.970 Assigned
5z2rD01 27 Feb, 2019 3.40.50.970 Assigned
5z2rD02 27 Feb, 2019 3.40.50.1220 Assigned
5z2rD03 27 Feb, 2019 3.40.50.970 Assigned
5z2rE01 28 Feb, 2019 3.40.50.970 Assigned
5z2rE02 28 Feb, 2019 3.40.50.1220 Assigned
5z2rE03 28 Feb, 2019 3.40.50.970 Assigned
5z2rF01 28 Feb, 2019 3.40.50.970 Assigned
5z2rF02 28 Feb, 2019 3.40.50.1220 Assigned
5z2rF03 28 Feb, 2019 3.40.50.970 Assigned
5z2rG01 28 Feb, 2019 3.40.50.970 Assigned
5z2rG02 28 Feb, 2019 3.40.50.1220 Assigned
5z2rG03 28 Feb, 2019 3.40.50.970 Assigned
5z2rH01 28 Feb, 2019 3.40.50.970 Assigned
5z2rH02 28 Feb, 2019 3.40.50.1220 Assigned
5z2rH03 28 Feb, 2019 3.40.50.970 Assigned

UniProtKB Entries (8)

Accession Gene ID Taxon Description
P17109 MEND_ECOLI Escherichia coli K-12 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109 MEND_ECOLI Escherichia coli K-12 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109 MEND_ECOLI Escherichia coli K-12 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109 MEND_ECOLI Escherichia coli K-12 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109 MEND_ECOLI Escherichia coli K-12 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109 MEND_ECOLI Escherichia coli K-12 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109 MEND_ECOLI Escherichia coli K-12 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109 MEND_ECOLI Escherichia coli K-12 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase