PDB 5ybb

PDB Information

PDB5YBB
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli K-12
Gene SourceCaldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Primary Citation
Structural basis underlying complex assembly and conformational transition of the type I R-M system.
Liu, Y.P., Tang, Q., Zhang, J.Z., Tian, L.F., Gao, P., Yan, X.X.
Proc. Natl. Acad. Sci. U.S.A.
HeaderDna Binding Protein/Dna
Released2017-09-04
Resolution3.200
CATH Insert Date17 Dec, 2017

PDB Images (13)

PDB Prints

PDB Chains (8)

Chain ID Date inserted into CATH CATH Status
A 17 Dec, 2017 Chopped
B 17 Dec, 2017 Chopped
C 17 Dec, 2017 Rejected
D 17 Dec, 2017 Holding pen
E 17 Dec, 2017 Rejected
G 17 Dec, 2017 Domchop review
H 17 Dec, 2017 Rejected
I 17 Dec, 2017 Rejected

CATH Domains (4)

Domain ID Date inserted into CATH Superfamily CATH Status
5ybbA01 21 Feb, 2018 Holding pen
5ybbA02 21 Feb, 2018 3.40.50.150 Assigned
5ybbB01 21 Feb, 2018 Write scan list
5ybbB02 21 Feb, 2018 3.40.50.150 Assigned

UniProtKB Entries (6)

Accession Gene ID Taxon Description
Q8R9Q4 Q8R9Q4_CALS4 Caldanaerobacter subterraneus subsp. tengcongensis MB4 Type I restriction-modification system methyltransferase subunit
Q8R9Q4 Q8R9Q4_CALS4 Caldanaerobacter subterraneus subsp. tengcongensis MB4 Type I restriction-modification system methyltransferase subunit
Q8R9Q6 Q8R9Q6_CALS4 Caldanaerobacter subterraneus subsp. tengcongensis MB4 Restriction endonuclease S subunits
Q8R9Q6 Q8R9Q6_CALS4 Caldanaerobacter subterraneus subsp. tengcongensis MB4 Restriction endonuclease S subunits
Q8R9Q4 Q8R9Q4_CALS4 Caldanaerobacter subterraneus subsp. tengcongensis MB4 Type I restriction-modification system methyltransferase subunit
Q8R9Q4 Q8R9Q4_CALS4 Caldanaerobacter subterraneus subsp. tengcongensis MB4 Type I restriction-modification system methyltransferase subunit