PDB 5x19

PDB Links
Overview

PDB Information

PDB	5X19
Method	X-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation	A nanosecond time-resolved XFEL analysis of structural changes associated with CO release from cytochrome c oxidase. Shimada, A., Kubo, M., Baba, S., Yamashita, K., Hirata, K., Ueno, G., Nomura, T., Kimura, T., Shinzawa-Itoh, K., Baba, J., Hatano, K., Eto, Y., Miyamoto, A., Murakami, H., Kumasaka, T., Owada, S., Tono, K., Yabashi, M., Yamaguchi, Y., Yanagisawa, S., Sakaguchi, M., Ogura, T., Komiya, R., Yan, J., Yamashita, E., Yamamoto, M., Ago, H., Yoshikawa, S., Tsukihara, T. Sci Adv
Header	Oxidoreductase
Released	2017-01-25
Resolution	2.200
CATH Insert Date	14 Nov, 2017

PDB Images (57)

5x19

PDB 5x19

5x19A

PDB Chain 5x19A

5x19B

PDB Chain 5x19B

5x19C

PDB Chain 5x19C

5x19D

PDB Chain 5x19D

5x19E

PDB Chain 5x19E

5x19F

PDB Chain 5x19F

5x19G

PDB Chain 5x19G

5x19H

PDB Chain 5x19H

5x19I

PDB Chain 5x19I

5x19J

PDB Chain 5x19J

5x19K

PDB Chain 5x19K

5x19L

PDB Chain 5x19L

5x19M

PDB Chain 5x19M

5x19N

PDB Chain 5x19N

5x19O

PDB Chain 5x19O

5x19P

PDB Chain 5x19P

5x19Q

PDB Chain 5x19Q

5x19R

PDB Chain 5x19R

5x19S

PDB Chain 5x19S

5x19T

PDB Chain 5x19T

5x19U

PDB Chain 5x19U

5x19V

PDB Chain 5x19V

5x19W

PDB Chain 5x19W

5x19X

PDB Chain 5x19X

5x19Y

PDB Chain 5x19Y

5x19Z

PDB Chain 5x19Z

5x19A00

CATH Domain 5x19A00

5x19B01

CATH Domain 5x19B01

5x19B02

CATH Domain 5x19B02

5x19C01

CATH Domain 5x19C01

5x19C02

CATH Domain 5x19C02

5x19D00

CATH Domain 5x19D00

5x19E00

CATH Domain 5x19E00

5x19F00

CATH Domain 5x19F00

5x19G00

CATH Domain 5x19G00

5x19H00

CATH Domain 5x19H00

5x19I00

CATH Domain 5x19I00

5x19J00

CATH Domain 5x19J00

5x19K00

CATH Domain 5x19K00

5x19L00

CATH Domain 5x19L00

5x19M00

CATH Domain 5x19M00

5x19N00

CATH Domain 5x19N00

5x19O01

CATH Domain 5x19O01

5x19O02

CATH Domain 5x19O02

5x19P01

CATH Domain 5x19P01

5x19P02

CATH Domain 5x19P02

5x19Q00

CATH Domain 5x19Q00

5x19R00

CATH Domain 5x19R00

5x19S00

CATH Domain 5x19S00

5x19T00

CATH Domain 5x19T00

5x19U00

CATH Domain 5x19U00

5x19V00

CATH Domain 5x19V00

5x19W00

CATH Domain 5x19W00

5x19X00

CATH Domain 5x19X00

5x19Y00

CATH Domain 5x19Y00

5x19Z00

CATH Domain 5x19Z00

PDB Prints

PDB Chains (26)

Chain ID	Date inserted into CATH	CATH Status
A	14 Nov, 2017	Chopped
B	14 Nov, 2017	Chopped
C	14 Nov, 2017	Chopped
D	14 Nov, 2017	Chopped
E	14 Nov, 2017	Chopped
F	14 Nov, 2017	Chopped
G	14 Nov, 2017	Chopped
H	14 Nov, 2017	Chopped
I	14 Nov, 2017	Chopped
J	14 Nov, 2017	Chopped
K	14 Nov, 2017	Chopped
L	14 Nov, 2017	Chopped
M	14 Nov, 2017	Chopped
N	14 Nov, 2017	Chopped
O	14 Nov, 2017	Chopped
P	14 Nov, 2017	Chopped
Q	14 Nov, 2017	Chopped
R	14 Nov, 2017	Chopped
S	14 Nov, 2017	Chopped
T	14 Nov, 2017	Chopped
U	14 Nov, 2017	Chopped
V	14 Nov, 2017	Chopped
W	14 Nov, 2017	Chopped
X	14 Nov, 2017	Chopped
Y	14 Nov, 2017	Chopped
Z	14 Nov, 2017	Chopped

CATH Domains (30)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5x19A00	10 Dec, 2017	1.20.210.10	Assigned
5x19B01	10 Dec, 2017	1.10.287.90	Assigned
5x19B02	10 Dec, 2017	2.60.40.420	Assigned
5x19C01	10 Dec, 2017	1.10.287.70	Assigned
5x19C02	10 Dec, 2017	1.20.120.80	Assigned
5x19D00	10 Dec, 2017	1.10.442.10	Assigned
5x19E00	10 Dec, 2017	1.25.40.40	Assigned
5x19F00	10 Dec, 2017	2.60.11.10	Assigned
5x19G00	10 Dec, 2017	4.10.95.10	Assigned
5x19H00	10 Dec, 2017	1.10.10.140	Assigned
5x19I00	10 Dec, 2017	4.10.93.10	Assigned
5x19J00	10 Dec, 2017	4.10.91.10	Assigned
5x19K00	10 Dec, 2017	4.10.51.10	Assigned
5x19L00	10 Dec, 2017	4.10.49.10	Assigned
5x19M00	10 Dec, 2017	4.10.81.10	Assigned
5x19N00	10 Dec, 2017	1.20.210.10	Assigned
5x19O01	10 Dec, 2017	1.10.287.90	Assigned
5x19O02	10 Dec, 2017	2.60.40.420	Assigned
5x19P01	10 Dec, 2017	1.10.287.70	Assigned
5x19P02	10 Dec, 2017	1.20.120.80	Assigned
5x19Q00	10 Dec, 2017	1.10.442.10	Assigned
5x19R00	10 Dec, 2017	1.25.40.40	Assigned
5x19S00	10 Dec, 2017	2.60.11.10	Assigned
5x19T00	10 Dec, 2017	4.10.95.10	Assigned
5x19U00	10 Dec, 2017	1.10.10.140	Assigned
5x19V00	10 Dec, 2017	4.10.93.10	Assigned
5x19W00	10 Dec, 2017	4.10.91.10	Assigned
5x19X00	10 Dec, 2017	4.10.51.10	Assigned
5x19Y00	10 Dec, 2017	4.10.49.10	Assigned
5x19Z00	10 Dec, 2017	4.10.81.10	Assigned

UniProtKB Entries (26)

Accession	Gene ID	Taxon	Description
P13183	COX7B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7B, mitochondrial
P13183	COX7B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7B, mitochondrial
P00429	CX6B1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6B1
P00430	COX7C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7C, mitochondrial
P00428	COX5B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5B, mitochondrial
P00428	COX5B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5B, mitochondrial
P00396	COX1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 1
P07471	CX6A2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6A2, mitochondrial
P00426	COX5A_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5A, mitochondrial
P00429	CX6B1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6B1
P00430	COX7C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7C, mitochondrial
P07470	CX7A1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7A1, mitochondrial
P00415	COX3_BOVIN	Bos taurus	Cytochrome c oxidase subunit 3
P10175	COX8B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 8B, mitochondrial
P04038	COX6C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6C
P00423	COX41_BOVIN	Bos taurus	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
P10175	COX8B_BOVIN	Bos taurus	Cytochrome c oxidase subunit 8B, mitochondrial
P04038	COX6C_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6C
P00423	COX41_BOVIN	Bos taurus	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
P68530	COX2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 2
P00426	COX5A_BOVIN	Bos taurus	Cytochrome c oxidase subunit 5A, mitochondrial
P07470	CX7A1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 7A1, mitochondrial
P00415	COX3_BOVIN	Bos taurus	Cytochrome c oxidase subunit 3
P00396	COX1_BOVIN	Bos taurus	Cytochrome c oxidase subunit 1
P68530	COX2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 2
P07471	CX6A2_BOVIN	Bos taurus	Cytochrome c oxidase subunit 6A2, mitochondrial