PDB 5kov
PDB Information
| PDB | 5KOV |
| Method | X-RAY DIFFRACTION |
| Host Organism | Escherichia coli BL21(DE3) |
| Gene Source | Human astrovirus-2 |
| Primary Citation | Structure of a Human Astrovirus Capsid-Antibody Complex and Mechanistic Insights into Virus Neutralization.
J. Virol.
|
| Header | Viral Protein |
| Released | 2016-07-01 |
| Resolution | 3.250 |
| CATH Insert Date | 20 Nov, 2016 |
PDB Images (39)
5kov
PDB 5kov
5kovA
PDB Chain 5kovA
5kovB
PDB Chain 5kovB
5kovC
PDB Chain 5kovC
5kovE
PDB Chain 5kovE
5kovG
PDB Chain 5kovG
5kovH
PDB Chain 5kovH
5kovI
PDB Chain 5kovI
5kovK
PDB Chain 5kovK
5kovM
PDB Chain 5kovM
5kovN
PDB Chain 5kovN
5kovO
PDB Chain 5kovO
5kovQ
PDB Chain 5kovQ
5kovS
PDB Chain 5kovS
5kovT
PDB Chain 5kovT
5kovU
PDB Chain 5kovU
5kovW
PDB Chain 5kovW
5kovA00
CATH Domain 5kovA00
5kovB00
CATH Domain 5kovB00
5kovC01
CATH Domain 5kovC01
5kovC02
CATH Domain 5kovC02
5kovE01
CATH Domain 5kovE01
5kovE02
CATH Domain 5kovE02
5kovG00
CATH Domain 5kovG00
5kovH00
CATH Domain 5kovH00
5kovI01
CATH Domain 5kovI01
5kovI02
CATH Domain 5kovI02
5kovK01
CATH Domain 5kovK01
5kovK02
CATH Domain 5kovK02
5kovM00
CATH Domain 5kovM00
5kovN00
CATH Domain 5kovN00
5kovO01
CATH Domain 5kovO01
5kovO02
CATH Domain 5kovO02
5kovQ00
CATH Domain 5kovQ00
5kovS00
CATH Domain 5kovS00
5kovT00
CATH Domain 5kovT00
5kovU01
CATH Domain 5kovU01
5kovU02
CATH Domain 5kovU02
5kovW00
CATH Domain 5kovW00
PDB Prints
PDB Chains (16)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 21 Nov, 2016 | Chopped |
| B | 21 Nov, 2016 | Chopped |
| C | 21 Nov, 2016 | Chopped |
| E | 21 Nov, 2016 | Chopped |
| G | 21 Nov, 2016 | Chopped |
| H | 21 Nov, 2016 | Chopped |
| I | 21 Nov, 2016 | Chopped |
| K | 21 Nov, 2016 | Chopped |
| M | 21 Nov, 2016 | Chopped |
| N | 21 Nov, 2016 | Chopped |
| O | 21 Nov, 2016 | Chopped |
| Q | 21 Nov, 2016 | Chopped |
| S | 21 Nov, 2016 | Chopped |
| T | 21 Nov, 2016 | Chopped |
| U | 21 Nov, 2016 | Chopped |
| W | 21 Nov, 2016 | Chopped |
CATH Domains (22)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5kovA00 | 24 Nov, 2016 | Holding pen | |
| 5kovB00 | 25 Nov, 2016 | Holding pen | |
| 5kovC01 | 24 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovC02 | 24 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovE01 | 25 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovE02 | 25 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovG00 | 25 Nov, 2016 | Holding pen | |
| 5kovH00 | 25 Nov, 2016 | Holding pen | |
| 5kovI01 | 25 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovI02 | 25 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovK01 | 25 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovK02 | 25 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovM00 | 25 Nov, 2016 | Holding pen | |
| 5kovN00 | 25 Nov, 2016 | Holding pen | |
| 5kovO01 | 25 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovO02 | 25 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovQ00 | 16 Feb, 2017 | Write scan list | |
| 5kovS00 | 25 Nov, 2016 | Holding pen | |
| 5kovT00 | 25 Nov, 2016 | Holding pen | |
| 5kovU01 | 25 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovU02 | 25 Nov, 2016 | 2.60.40.10 | Assigned |
| 5kovW00 | 16 Feb, 2017 | Holding pen |
UniProtKB Entries (8)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| Q82446 | CAPSD_HASV2 | Human astrovirus 2 | Capsid polyprotein VP90 |
| Q82446 | CAPSD_HASV2 | Human astrovirus 2 | Capsid polyprotein VP90 |
| Q82446 | CAPSD_HASV2 | Human astrovirus 2 | Capsid polyprotein VP90 |
| Q82446 | CAPSD_HASV2 | Human astrovirus 2 | Capsid polyprotein VP90 |
| Q82446 | CAPSD_HASV2 | Human astrovirus 2 | Capsid polyprotein VP90 |
| Q82446 | CAPSD_HASV2 | Human astrovirus 2 | Capsid polyprotein VP90 |
| Q82446 | CAPSD_HASV2 | Human astrovirus 2 | Capsid polyprotein VP90 |
| Q82446 | CAPSD_HASV2 | Human astrovirus 2 | Capsid polyprotein VP90 |
