PDB 5k36
PDB Information
| PDB | 5K36 |
| Method | X-RAY DIFFRACTION |
| Host Organism | Escherichia coli |
| Gene Source | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) |
| Primary Citation | Nuclear RNA Exosome at 3.1 angstrom Reveals Substrate Specificities, RNA Paths, and Allosteric Inhibition of Rrp44/Dis3.
Mol.Cell
|
| Header | Hydrolase/Rna |
| Released | 2016-05-19 |
| Resolution | 3.100 |
| CATH Insert Date | 20 Nov, 2016 |
PDB Images (30)
5k36
PDB 5k36
5k36A
PDB Chain 5k36A
5k36B
PDB Chain 5k36B
5k36C
PDB Chain 5k36C
5k36D
PDB Chain 5k36D
5k36E
PDB Chain 5k36E
5k36F
PDB Chain 5k36F
5k36G
PDB Chain 5k36G
5k36H
PDB Chain 5k36H
5k36I
PDB Chain 5k36I
5k36J
PDB Chain 5k36J
5k36K
PDB Chain 5k36K
5k36L
PDB Chain 5k36L
5k36M
PDB Chain 5k36M
5k36A00
CATH Domain 5k36A00
5k36B00
CATH Domain 5k36B00
5k36C00
CATH Domain 5k36C00
5k36D00
CATH Domain 5k36D00
5k36E00
CATH Domain 5k36E00
5k36F00
CATH Domain 5k36F00
5k36G01
CATH Domain 5k36G01
5k36G02
CATH Domain 5k36G02
5k36G03
CATH Domain 5k36G03
5k36H01
CATH Domain 5k36H01
5k36H02
CATH Domain 5k36H02
5k36K01
CATH Domain 5k36K01
5k36K02
CATH Domain 5k36K02
5k36K03
CATH Domain 5k36K03
5k36K04
CATH Domain 5k36K04
5k36K05
CATH Domain 5k36K05
PDB Prints
PDB Chains (13)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 21 Nov, 2016 | Chopped |
| B | 21 Nov, 2016 | Chopped |
| C | 21 Nov, 2016 | Chopped |
| D | 21 Nov, 2016 | Chopped |
| E | 21 Nov, 2016 | Chopped |
| F | 21 Nov, 2016 | Chopped |
| G | 21 Nov, 2016 | Chopped |
| H | 21 Nov, 2016 | Chopped |
| I | 21 Nov, 2016 | Holding pen |
| J | 21 Nov, 2016 | Domchop review |
| K | 21 Nov, 2016 | Chopped |
| L | 21 Nov, 2016 | Rejected |
| M | 21 Nov, 2016 | Rejected |
CATH Domains (16)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5k36A00 | 24 Nov, 2016 | 3.30.230.70 | Assigned |
| 5k36B00 | 24 Nov, 2016 | 3.30.230.70 | Assigned |
| 5k36C00 | 16 Feb, 2017 | 3.30.230.70 | Assigned |
| 5k36D00 | 24 Nov, 2016 | 3.30.230.70 | Assigned |
| 5k36E00 | 24 Nov, 2016 | 3.30.230.70 | Assigned |
| 5k36F00 | 24 Nov, 2016 | 3.30.230.70 | Assigned |
| 5k36G01 | 24 Nov, 2016 | 2.40.50.100 | Assigned |
| 5k36G02 | 24 Nov, 2016 | 2.40.50.140 | Assigned |
| 5k36G03 | 24 Nov, 2016 | 3.30.1370.10 | Assigned |
| 5k36H01 | 30 Nov, 2016 | 2.40.50.100 | Assigned |
| 5k36H02 | 30 Nov, 2016 | Holding pen | |
| 5k36K01 | 21 Feb, 2018 | Holding pen | |
| 5k36K02 | 21 Feb, 2018 | Holding pen | |
| 5k36K03 | 21 Feb, 2018 | 2.40.50.700 | Assigned |
| 5k36K04 | 21 Feb, 2018 | Holding pen | |
| 5k36K05 | 21 Feb, 2018 | 2.40.50.140 | Assigned |
UniProtKB Entries (11)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| P25359 | RRP43_YEAST | Saccharomyces cerevisiae S288C | Exosome complex component RRP43 |
| P48240 | MTR3_YEAST | Saccharomyces cerevisiae S288C | Exosome complex component MTR3 |
| P38792 | RRP4_YEAST | Saccharomyces cerevisiae S288C | Exosome complex component RRP4 |
| P53859 | CSL4_YEAST | Saccharomyces cerevisiae S288C | Exosome complex component CSL4 |
| Q12277 | RRP42_YEAST | Saccharomyces cerevisiae S288C | Exosome complex component RRP42 |
| P46948 | RRP41_YEAST | Saccharomyces cerevisiae S288C | Exosome complex component SKI6 |
| Q12149 | RRP6_YEAST | Saccharomyces cerevisiae S288C | Exosome complex exonuclease RRP6 |
| Q08285 | RRP40_YEAST | Saccharomyces cerevisiae S288C | Exosome complex component RRP40 |
| P53256 | RRP46_YEAST | Saccharomyces cerevisiae S288C | Exosome complex component RRP46 |
| Q08162 | RRP44_YEAST | Saccharomyces cerevisiae S288C | Exosome complex exonuclease DIS3 |
| Q05636 | RRP45_YEAST | Saccharomyces cerevisiae S288C | Exosome complex component RRP45 |
