PDB Information

PDB5IM5
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli
Gene SourceMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Primary Citation
Accurate design of megadalton-scale two-component icosahedral protein complexes.
Bale, J.B., Gonen, S., Liu, Y., Sheffler, W., Ellis, D., Thomas, C., Cascio, D., Yeates, T.O., Gonen, T., King, N.P., Baker, D.
Science
HeaderProtein Binding
Released2016-03-05
Resolution3.700
CATH Insert Date07 Aug, 2016

PDB Images (61)

PDB Prints

PDB Chains (30)

Chain ID Date inserted into CATH CATH Status
1 08 Aug, 2016 Chopped
2 08 Aug, 2016 Chopped
3 08 Aug, 2016 Chopped
4 08 Aug, 2016 Chopped
A 08 Aug, 2016 Chopped
B 08 Aug, 2016 Chopped
C 08 Aug, 2016 Chopped
D 08 Aug, 2016 Chopped
E 08 Aug, 2016 Chopped
F 08 Aug, 2016 Chopped
G 08 Aug, 2016 Chopped
H 08 Aug, 2016 Chopped
I 08 Aug, 2016 Chopped
J 08 Aug, 2016 Chopped
K 08 Aug, 2016 Chopped
L 08 Aug, 2016 Chopped
M 08 Aug, 2016 Chopped
N 08 Aug, 2016 Chopped
O 08 Aug, 2016 Chopped
P 08 Aug, 2016 Chopped
Q 08 Aug, 2016 Chopped
R 08 Aug, 2016 Chopped
S 08 Aug, 2016 Chopped
T 08 Aug, 2016 Chopped
U 08 Aug, 2016 Chopped
V 08 Aug, 2016 Chopped
W 08 Aug, 2016 Chopped
X 08 Aug, 2016 Chopped
Y 08 Aug, 2016 Chopped
Z 08 Aug, 2016 Chopped

CATH Domains (30)

Domain ID Date inserted into CATH Superfamily CATH Status
5im5100 01 Sep, 2016 3.20.20.70 Assigned
5im5200 01 Sep, 2016 3.20.20.70 Assigned
5im5300 01 Sep, 2016 3.20.20.70 Assigned
5im5400 01 Sep, 2016 3.20.20.70 Assigned
5im5A00 01 Sep, 2016 3.40.50.960 Assigned
5im5B00 01 Sep, 2016 3.40.50.960 Assigned
5im5C00 01 Sep, 2016 3.40.50.960 Assigned
5im5D00 01 Sep, 2016 3.40.50.960 Assigned
5im5E00 01 Sep, 2016 3.40.50.960 Assigned
5im5F00 01 Sep, 2016 3.40.50.960 Assigned
5im5G00 01 Sep, 2016 3.40.50.960 Assigned
5im5H00 01 Sep, 2016 3.40.50.960 Assigned
5im5I00 01 Sep, 2016 3.40.50.960 Assigned
5im5J00 01 Sep, 2016 3.40.50.960 Assigned
5im5K00 01 Sep, 2016 3.40.50.960 Assigned
5im5L00 01 Sep, 2016 3.20.20.70 Assigned
5im5M00 01 Sep, 2016 3.40.50.960 Assigned
5im5N00 01 Sep, 2016 3.20.20.70 Assigned
5im5O00 01 Sep, 2016 3.40.50.960 Assigned
5im5P00 01 Sep, 2016 3.20.20.70 Assigned
5im5Q00 01 Sep, 2016 3.40.50.960 Assigned
5im5R00 01 Sep, 2016 3.20.20.70 Assigned
5im5S00 01 Sep, 2016 3.40.50.960 Assigned
5im5T00 01 Sep, 2016 3.20.20.70 Assigned
5im5U00 01 Sep, 2016 3.20.20.70 Assigned
5im5V00 01 Sep, 2016 3.20.20.70 Assigned
5im5W00 01 Sep, 2016 3.20.20.70 Assigned
5im5X00 01 Sep, 2016 3.20.20.70 Assigned
5im5Y00 01 Sep, 2016 3.20.20.70 Assigned
5im5Z00 01 Sep, 2016 3.20.20.70 Assigned

UniProtKB Entries (30)

Accession Gene ID Taxon Description
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
A5KUH7 A5KUH7_VIBBS Vibrionales bacterium SWAT-3 Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase
Q58584 RISC_METJA Methanocaldococcus jannaschii DSM 2661 Riboflavin synthase