PDB 5ejm

PDB Links
Overview

PDB Information

PDB	5EJM
Method	X-RAY DIFFRACTION
Host Organism	Escherichia coli BL21(DE3)
Gene Source	Escherichia coli K12
Primary Citation	Two active site arginines are critical determinants of substrate binding and catalysis in MenD, a thiamine-dependent enzyme in menaquinone biosynthesis. Qin, M.M., Song, H.G., Dai, X., Chen, Y.Z., Guo, Z.H. Biochem. J.
Header	Transferase
Released	2015-11-02
Resolution	1.720
CATH Insert Date	20 Nov, 2016

PDB Images (33)

5ejm

PDB 5ejm

5ejmA

PDB Chain 5ejmA

5ejmB

PDB Chain 5ejmB

5ejmC

PDB Chain 5ejmC

5ejmD

PDB Chain 5ejmD

5ejmE

PDB Chain 5ejmE

5ejmF

PDB Chain 5ejmF

5ejmG

PDB Chain 5ejmG

5ejmH

PDB Chain 5ejmH

5ejmA01

CATH Domain 5ejmA01

5ejmA02

CATH Domain 5ejmA02

5ejmA03

CATH Domain 5ejmA03

5ejmB01

CATH Domain 5ejmB01

5ejmB02

CATH Domain 5ejmB02

5ejmB03

CATH Domain 5ejmB03

5ejmC01

CATH Domain 5ejmC01

5ejmC02

CATH Domain 5ejmC02

5ejmC03

CATH Domain 5ejmC03

5ejmD01

CATH Domain 5ejmD01

5ejmD02

CATH Domain 5ejmD02

5ejmD03

CATH Domain 5ejmD03

5ejmE01

CATH Domain 5ejmE01

5ejmE02

CATH Domain 5ejmE02

5ejmE03

CATH Domain 5ejmE03

5ejmF01

CATH Domain 5ejmF01

5ejmF02

CATH Domain 5ejmF02

5ejmF03

CATH Domain 5ejmF03

5ejmG01

CATH Domain 5ejmG01

5ejmG02

CATH Domain 5ejmG02

5ejmG03

CATH Domain 5ejmG03

5ejmH01

CATH Domain 5ejmH01

5ejmH02

CATH Domain 5ejmH02

5ejmH03

CATH Domain 5ejmH03

PDB Prints

PDB Chains (8)

Chain ID	Date inserted into CATH	CATH Status
A	21 Nov, 2016	Chopped
B	21 Nov, 2016	Chopped
C	21 Nov, 2016	Chopped
D	21 Nov, 2016	Chopped
E	21 Nov, 2016	Chopped
F	21 Nov, 2016	Chopped
G	21 Nov, 2016	Chopped
H	21 Nov, 2016	Chopped

CATH Domains (24)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5ejmA01	25 Nov, 2016	3.40.50.970	Assigned
5ejmA02	25 Nov, 2016	3.40.50.1220	Assigned
5ejmA03	25 Nov, 2016	3.40.50.970	Assigned
5ejmB01	25 Nov, 2016	3.40.50.970	Assigned
5ejmB02	25 Nov, 2016	3.40.50.1220	Assigned
5ejmB03	25 Nov, 2016	3.40.50.970	Assigned
5ejmC01	25 Nov, 2016	3.40.50.970	Assigned
5ejmC02	25 Nov, 2016	3.40.50.1220	Assigned
5ejmC03	25 Nov, 2016	3.40.50.970	Assigned
5ejmD01	25 Nov, 2016	3.40.50.970	Assigned
5ejmD02	25 Nov, 2016	3.40.50.1220	Assigned
5ejmD03	25 Nov, 2016	3.40.50.970	Assigned
5ejmE01	25 Nov, 2016	3.40.50.970	Assigned
5ejmE02	25 Nov, 2016	3.40.50.1220	Assigned
5ejmE03	25 Nov, 2016	3.40.50.970	Assigned
5ejmF01	25 Nov, 2016	3.40.50.970	Assigned
5ejmF02	25 Nov, 2016	3.40.50.1220	Assigned
5ejmF03	25 Nov, 2016	3.40.50.970	Assigned
5ejmG01	24 Nov, 2016	3.40.50.970	Assigned
5ejmG02	24 Nov, 2016	3.40.50.1220	Assigned
5ejmG03	24 Nov, 2016	3.40.50.970	Assigned
5ejmH01	25 Nov, 2016	3.40.50.970	Assigned
5ejmH02	25 Nov, 2016	3.40.50.1220	Assigned
5ejmH03	25 Nov, 2016	3.40.50.970	Assigned

UniProtKB Entries (8)

Accession	Gene ID	Taxon	Description
P17109	MEND_ECOLI	Escherichia coli K-12	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109	MEND_ECOLI	Escherichia coli K-12	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109	MEND_ECOLI	Escherichia coli K-12	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109	MEND_ECOLI	Escherichia coli K-12	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109	MEND_ECOLI	Escherichia coli K-12	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109	MEND_ECOLI	Escherichia coli K-12	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109	MEND_ECOLI	Escherichia coli K-12	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
P17109	MEND_ECOLI	Escherichia coli K-12	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase

Network disruptions