PDB 5d1o
PDB Information
| PDB | 5D1O |
| Method | X-RAY DIFFRACTION |
| Host Organism | Escherichia coli |
| Gene Source | Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) |
| Primary Citation | Structural and mutational analysis of archaeal ATP-dependent RNA ligase identifies amino acids required for RNA binding and catalysis.
Nucleic Acids Res.
|
| Header | Ligase |
| Released | 2015-08-04 |
| Resolution | 2.650 |
| CATH Insert Date | 10 Apr, 2016 |
PDB Images (13)
5d1o
PDB 5d1o
5d1oA
PDB Chain 5d1oA
5d1oB
PDB Chain 5d1oB
5d1oA01
CATH Domain 5d1oA01
5d1oA02
CATH Domain 5d1oA02
5d1oA03
CATH Domain 5d1oA03
5d1oA04
CATH Domain 5d1oA04
5d1oA05
CATH Domain 5d1oA05
5d1oB01
CATH Domain 5d1oB01
5d1oB02
CATH Domain 5d1oB02
5d1oB03
CATH Domain 5d1oB03
5d1oB04
CATH Domain 5d1oB04
5d1oB05
CATH Domain 5d1oB05
PDB Prints
PDB Chains (2)
| Chain ID | Date inserted into CATH | CATH Status |
|---|---|---|
| A | 11 Apr, 2016 | Chopped |
| B | 11 Apr, 2016 | Chopped |
CATH Domains (10)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
|---|---|---|---|
| 5d1oA01 | 06 May, 2016 | 3.10.450.740 | Assigned |
| 5d1oA02 | 06 May, 2016 | 3.30.1490.70 | Assigned |
| 5d1oA03 | 06 May, 2016 | 3.30.470.30 | Assigned |
| 5d1oA04 | 06 May, 2016 | Holding pen | |
| 5d1oA05 | 06 May, 2016 | Holding pen | |
| 5d1oB01 | 06 May, 2016 | 3.10.450.740 | Assigned |
| 5d1oB02 | 06 May, 2016 | 3.30.1490.70 | Assigned |
| 5d1oB03 | 06 May, 2016 | 3.30.470.30 | Assigned |
| 5d1oB04 | 06 May, 2016 | Holding pen | |
| 5d1oB05 | 06 May, 2016 | Holding pen |
UniProtKB Entries (2)
| Accession | Gene ID | Taxon | Description |
|---|---|---|---|
| O27289 | O27289_METTH | Methanothermobacter thermautotrophicus str. Delta H | Conserved protein |
| O27289 | O27289_METTH | Methanothermobacter thermautotrophicus str. Delta H | Conserved protein |
