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PDB Information
| PDB | 5CMS |
| Method | X-RAY DIFFRACTION |
| Host Organism | Escherichia coli |
| Gene Source | Escherichia coli |
| Primary Citation |
Structural insights into the mechanism of Escherichia coli YmdB: A 2'-O-acetyl-ADP-ribose deacetylase
Zhang, W., Wang, C., Song, Y., Shao, C., Zhang, X., Zang, J.
J.Struct.Biol.
|
| Header | Hydrolase |
| Released | 2015-07-17 |
| Resolution | 2.980 |
| CATH Insert Date | 15 Nov, 2015 |
PDB Images (37)
5cmsA00
CATH Domain 5cmsA00
5cmsB00
CATH Domain 5cmsB00
5cmsC00
CATH Domain 5cmsC00
5cmsD00
CATH Domain 5cmsD00
5cmsE00
CATH Domain 5cmsE00
5cmsF00
CATH Domain 5cmsF00
5cmsG00
CATH Domain 5cmsG00
5cmsH00
CATH Domain 5cmsH00
5cmsI00
CATH Domain 5cmsI00
5cmsJ00
CATH Domain 5cmsJ00
5cmsK00
CATH Domain 5cmsK00
5cmsL00
CATH Domain 5cmsL00
5cmsM00
CATH Domain 5cmsM00
5cmsN00
CATH Domain 5cmsN00
5cmsO00
CATH Domain 5cmsO00
5cmsP00
CATH Domain 5cmsP00
5cmsQ00
CATH Domain 5cmsQ00
5cmsR00
CATH Domain 5cmsR00
PDB Chains (18)
| Chain ID | Date inserted into CATH | CATH Status |
| A | 16 Nov, 2015 | Chopped
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| B | 16 Nov, 2015 | Chopped
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| C | 16 Nov, 2015 | Chopped
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| D | 16 Nov, 2015 | Chopped
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| E | 16 Nov, 2015 | Chopped
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| F | 16 Nov, 2015 | Chopped
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| G | 16 Nov, 2015 | Chopped
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| H | 16 Nov, 2015 | Chopped
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| I | 16 Nov, 2015 | Chopped
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| J | 16 Nov, 2015 | Chopped
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| K | 16 Nov, 2015 | Chopped
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| L | 16 Nov, 2015 | Chopped
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| M | 16 Nov, 2015 | Chopped
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| N | 16 Nov, 2015 | Chopped
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| O | 16 Nov, 2015 | Chopped
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| P | 16 Nov, 2015 | Chopped
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| Q | 16 Nov, 2015 | Chopped
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| R | 16 Nov, 2015 | Chopped
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CATH Domains (18)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
| 5cmsA00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsB00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsC00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsD00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsE00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsF00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsG00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsH00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsI00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsJ00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsK00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsL00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsM00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsN00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsO00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsP00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsQ00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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| 5cmsR00 | 24 Nov, 2015 | 3.40.220.10 | Assigned
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UniProtKB Entries (18)
| Accession |
Gene ID |
Taxon |
Description |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |
| P0A8D6 |
YMDB_ECOLI |
Escherichia coli K-12 |
O-acetyl-ADP-ribose deacetylase |