PDB 4y2d

PDB Information

PDB4Y2D
MethodX-RAY DIFFRACTION
Host OrganismSpodoptera frugiperda
Gene SourceMus musculus
Primary Citation
Structural modifications of alphaGalCer in both lipid and carbohydrate moiety influence activation of murine and human iNKT cells
Birkholz, A., Nemcovic, M., Yu, E.D., Girardi, E., Wang, J., Khurana, A., Pauwels, N., Franck, R.W., Tsuji, M., Howell, A., Calenbergh, S., Kronenberg, M., Zajonc, D.M.
To Be Published
HeaderImmune System
Released2015-02-09
Resolution3.050
CATH Insert Date28 Jun, 2015

PDB Images (23)

PDB Prints

PDB Chains (8)

Chain ID Date inserted into CATH CATH Status
A 29 Jun, 2015 Chopped
B 29 Jun, 2015 Chopped
C 29 Jun, 2015 Chopped
D 29 Jun, 2015 Chopped
E 29 Jun, 2015 Chopped
F 29 Jun, 2015 Chopped
G 29 Jun, 2015 Chopped
H 29 Jun, 2015 Chopped

CATH Domains (14)

Domain ID Date inserted into CATH Superfamily CATH Status
4y2dA01 22 Jul, 2015 3.30.500.10 Assigned
4y2dA02 22 Jul, 2015 2.60.40.10 Assigned
4y2dB00 22 Jul, 2015 2.60.40.10 Assigned
4y2dC01 22 Jul, 2015 2.60.40.10 Assigned
4y2dC02 22 Jul, 2015 2.60.40.10 Assigned
4y2dD01 22 Jul, 2015 2.60.40.10 Assigned
4y2dD02 22 Jul, 2015 2.60.40.10 Assigned
4y2dE01 22 Jul, 2015 3.30.500.10 Assigned
4y2dE02 22 Jul, 2015 2.60.40.10 Assigned
4y2dF00 22 Jul, 2015 2.60.40.10 Assigned
4y2dG01 22 Jul, 2015 2.60.40.10 Assigned
4y2dG02 22 Jul, 2015 2.60.40.10 Assigned
4y2dH01 22 Jul, 2015 2.60.40.10 Assigned
4y2dH02 22 Jul, 2015 2.60.40.10 Assigned

UniProtKB Entries (12)

Accession Gene ID Taxon Description
A0A5B9 TRBC2_HUMAN Homo sapiens T cell receptor beta constant 2
P11609 CD1D1_MOUSE Mus musculus Antigen-presenting glycoprotein CD1d1
A0A0B4J1J9 A0A0B4J1J9_MOUSE Mus musculus T cell receptor alpha variable 11
A2NTY6 A2NTY6_MOUSE Mus musculus Beta-chain
P01848 TRAC_HUMAN Homo sapiens T cell receptor alpha constant
P01887 B2MG_MOUSE Mus musculus Beta-2-microglobulin
P01848 TRAC_HUMAN Homo sapiens T cell receptor alpha constant
P01887 B2MG_MOUSE Mus musculus Beta-2-microglobulin
P11609 CD1D1_MOUSE Mus musculus Antigen-presenting glycoprotein CD1d1
A2NTY6 A2NTY6_MOUSE Mus musculus Beta-chain
A0A0B4J1J9 A0A0B4J1J9_MOUSE Mus musculus T cell receptor alpha variable 11
A0A5B9 TRBC2_HUMAN Homo sapiens T cell receptor beta constant 2