PDB Information

PDB4PJO
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli
Gene SourceHomo sapiens
Primary Citation
Crystal structure of human U1 snRNP, a small nuclear ribonucleoprotein particle, reveals the mechanism of 5' splice site recognition.
Kondo, Y., Oubridge, C., van Roon, A.M., Nagai, K.
Elife
HeaderSplicing
Released2014-05-12
Resolution3.300
CATH Insert Date04 Jan, 2015

PDB Images (77)

PDB Prints

PDB Chains (44)

Chain ID Date inserted into CATH CATH Status
1 05 Jan, 2015 Rejected
2 05 Jan, 2015 Rejected
3 05 Jan, 2015 Rejected
4 05 Jan, 2015 Rejected
a 05 Jan, 2015 Chopped
A 05 Jan, 2015 Chopped
b 05 Jan, 2015 Chopped
B 05 Jan, 2015 Chopped
c 05 Jan, 2015 Chopped
C 05 Jan, 2015 Chopped
d 05 Jan, 2015 Chopped
D 05 Jan, 2015 Chopped
e 05 Jan, 2015 Chopped
E 05 Jan, 2015 Chopped
f 05 Jan, 2015 Chopped
F 05 Jan, 2015 Chopped
g 05 Jan, 2015 Chopped
G 05 Jan, 2015 Chopped
k 05 Jan, 2015 Holding pen
K 05 Jan, 2015 Holding pen
l 05 Jan, 2015 Chopped
L 05 Jan, 2015 Chopped
m 05 Jan, 2015 Chopped
M 05 Jan, 2015 Chopped
n 05 Jan, 2015 Domchop allotted
N 05 Jan, 2015 Holding pen
o 05 Jan, 2015 Chopped
O 05 Jan, 2015 Chopped
p 05 Jan, 2015 Chopped
P 05 Jan, 2015 Chopped
q 05 Jan, 2015 Chopped
Q 05 Jan, 2015 Chopped
r 05 Jan, 2015 Chopped
R 05 Jan, 2015 Chopped
s 05 Jan, 2015 Chopped
S 05 Jan, 2015 Chopped
t 05 Jan, 2015 Chopped
T 05 Jan, 2015 Chopped
u 05 Jan, 2015 Chopped
U 05 Jan, 2015 Chopped
x 05 Jan, 2015 Rejected
X 05 Jan, 2015 Rejected
y 05 Jan, 2015 Rejected
Y 05 Jan, 2015 Rejected

CATH Domains (32)

Domain ID Date inserted into CATH Superfamily CATH Status
4pjoa00 10 Jan, 2015 2.30.30.100 Assigned
4pjoA00 08 Jan, 2015 2.30.30.100 Assigned
4pjob00 08 Jan, 2015 2.30.30.100 Assigned
4pjoB00 10 Jan, 2015 2.30.30.100 Assigned
4pjoc00 10 Jan, 2015 2.30.30.100 Assigned
4pjoC00 10 Jan, 2015 2.30.30.100 Assigned
4pjod00 10 Jan, 2015 2.30.30.100 Assigned
4pjoD00 10 Jan, 2015 2.30.30.100 Assigned
4pjoe00 10 Jan, 2015 2.30.30.100 Assigned
4pjoE00 10 Jan, 2015 2.30.30.100 Assigned
4pjof00 08 Jan, 2015 2.30.30.100 Assigned
4pjoF00 10 Jan, 2015 2.30.30.100 Assigned
4pjog00 10 Jan, 2015 2.30.30.100 Assigned
4pjoG00 10 Jan, 2015 2.30.30.100 Assigned
4pjol00 20 Mar, 2016 Holding pen
4pjoL00 20 Mar, 2016 Holding pen
4pjom00 20 Mar, 2016 Cathedral cath submit
4pjoM00 20 Mar, 2016 Holding pen
4pjoo00 10 Jan, 2015 2.30.30.100 Assigned
4pjoO00 10 Jan, 2015 2.30.30.100 Assigned
4pjop00 10 Jan, 2015 2.30.30.100 Assigned
4pjoP00 10 Jan, 2015 2.30.30.100 Assigned
4pjoq00 10 Jan, 2015 2.30.30.100 Assigned
4pjoQ00 08 Jan, 2015 2.30.30.100 Assigned
4pjor00 10 Jan, 2015 2.30.30.100 Assigned
4pjoR00 08 Jan, 2015 2.30.30.100 Assigned
4pjos00 08 Jan, 2015 2.30.30.100 Assigned
4pjoS00 10 Jan, 2015 2.30.30.100 Assigned
4pjot00 10 Jan, 2015 2.30.30.100 Assigned
4pjoT00 10 Jan, 2015 2.30.30.100 Assigned
4pjou00 08 Jan, 2015 2.30.30.100 Assigned
4pjoU00 10 Jan, 2015 2.30.30.100 Assigned

UniProtKB Entries (36)

Accession Gene ID Taxon Description
P09234 RU1C_HUMAN Homo sapiens U1 small nuclear ribonucleoprotein C
P62308 RUXG_HUMAN Homo sapiens Small nuclear ribonucleoprotein G
P62316 SMD2_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D2
P62318 SMD3_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D3
P62318 SMD3_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D3
P14678 RSMB_HUMAN Homo sapiens Small nuclear ribonucleoprotein-associated proteins B and B'
P08621 RU17_HUMAN Homo sapiens U1 small nuclear ribonucleoprotein 70 kDa
P62314 SMD1_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D1
P62304 RUXE_HUMAN Homo sapiens Small nuclear ribonucleoprotein E
P62304 RUXE_HUMAN Homo sapiens Small nuclear ribonucleoprotein E
P62318 SMD3_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D3
P09234 RU1C_HUMAN Homo sapiens U1 small nuclear ribonucleoprotein C
P09234 RU1C_HUMAN Homo sapiens U1 small nuclear ribonucleoprotein C
P14678 RSMB_HUMAN Homo sapiens Small nuclear ribonucleoprotein-associated proteins B and B'
P62316 SMD2_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D2
P62306 RUXF_HUMAN Homo sapiens Small nuclear ribonucleoprotein F
P62306 RUXF_HUMAN Homo sapiens Small nuclear ribonucleoprotein F
P62314 SMD1_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D1
P14678 RSMB_HUMAN Homo sapiens Small nuclear ribonucleoprotein-associated proteins B and B'
P62308 RUXG_HUMAN Homo sapiens Small nuclear ribonucleoprotein G
P62308 RUXG_HUMAN Homo sapiens Small nuclear ribonucleoprotein G
P08621 RU17_HUMAN Homo sapiens U1 small nuclear ribonucleoprotein 70 kDa
P62314 SMD1_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D1
P62314 SMD1_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D1
P62316 SMD2_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D2
P62306 RUXF_HUMAN Homo sapiens Small nuclear ribonucleoprotein F
P62306 RUXF_HUMAN Homo sapiens Small nuclear ribonucleoprotein F
P62304 RUXE_HUMAN Homo sapiens Small nuclear ribonucleoprotein E
P14678 RSMB_HUMAN Homo sapiens Small nuclear ribonucleoprotein-associated proteins B and B'
P08621 RU17_HUMAN Homo sapiens U1 small nuclear ribonucleoprotein 70 kDa
P08621 RU17_HUMAN Homo sapiens U1 small nuclear ribonucleoprotein 70 kDa
P62316 SMD2_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D2
P62318 SMD3_HUMAN Homo sapiens Small nuclear ribonucleoprotein Sm D3
P62304 RUXE_HUMAN Homo sapiens Small nuclear ribonucleoprotein E
P09234 RU1C_HUMAN Homo sapiens U1 small nuclear ribonucleoprotein C
P62308 RUXG_HUMAN Homo sapiens Small nuclear ribonucleoprotein G