PDB Information

PDB3GTM
MethodX-RAY DIFFRACTION
Host OrganismEscherichia coli
Gene SourceSaccharomyces cerevisiae
Primary Citation
Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
Wang, D., Bushnell, D.A., Huang, X., Westover, K.D., Levitt, M., Kornberg, R.D.
Science
HeaderTranscription, Transferase/Dna-Rna Hybri
Released2009-03-27
Resolution3.8
CATH Insert Date16 Aug, 2009

PDB Images (45)

PDB Prints

PDB Chains (14)

Chain ID Date inserted into CATH CATH Status
A 16 Aug, 2009 Chopped
B 16 Aug, 2009 Chopped
C 16 Aug, 2009 Chopped
E 16 Aug, 2009 Chopped
F 16 Aug, 2009 Chopped
H 16 Aug, 2009 Chopped
I 16 Aug, 2009 Chopped
J 16 Aug, 2009 Chopped
K 16 Aug, 2009 Chopped
L 16 Aug, 2009 Chopped
M 16 Aug, 2009 Rejected
N 16 Aug, 2009 Rejected
O 16 Aug, 2009 Rejected
S 16 Aug, 2009 Chopped

CATH Domains (30)

Domain ID Date inserted into CATH Superfamily CATH Status
3gtmA01 09 Dec, 2013 Holding pen
3gtmA02 09 Dec, 2013 Holding pen
3gtmA03 09 Dec, 2013 2.40.40.20 Assigned
3gtmA04 09 Dec, 2013 3.30.1490.180 Assigned
3gtmA05 09 Dec, 2013 Holding pen
3gtmA06 09 Dec, 2013 Holding pen
3gtmA07 09 Dec, 2013 Holding pen
3gtmA08 09 Dec, 2013 Holding pen
3gtmA09 09 Dec, 2013 Holding pen
3gtmB01 28 Aug, 2013 Holding pen
3gtmB02 28 Aug, 2013 Holding pen
3gtmB03 28 Aug, 2013 Holding pen
3gtmB04 28 Aug, 2013 3.90.1110.10 Assigned
3gtmB05 28 Aug, 2013 Holding pen
3gtmB06 28 Aug, 2013 2.40.270.10 Assigned
3gtmB07 28 Aug, 2013 2.40.50.150 Assigned
3gtmB08 28 Aug, 2013 Holding pen
3gtmC01 18 Jan, 2010 3.30.1360.10 Assigned
3gtmC02 18 Jan, 2010 2.170.120.12 Assigned
3gtmE01 18 Jan, 2010 3.40.1340.10 Assigned
3gtmE02 18 Jan, 2010 3.90.940.20 Assigned
3gtmF00 18 Jan, 2010 3.90.940.10 Assigned
3gtmH00 18 Jan, 2010 2.40.50.140 Assigned
3gtmI01 18 Jan, 2010 2.20.25.10 Assigned
3gtmI02 18 Jan, 2010 2.20.25.10 Assigned
3gtmJ00 18 Jan, 2010 1.10.10.60 Assigned
3gtmK00 18 Jan, 2010 3.30.1360.10 Assigned
3gtmL00 18 Jan, 2010 2.20.28.30 Assigned
3gtmS01 28 Jul, 2010 Homcheck ready
3gtmS02 28 Jul, 2010 2.20.25.10 Assigned

UniProtKB Entries (11)

Accession Gene ID Taxon Description
P27999 RPB9_YEAST Saccharomyces cerevisiae S288c DNA-directed RNA polymerase II subunit RPB9
P07273 TFS2_YEAST Saccharomyces cerevisiae S288c Transcription elongation factor S-II
P04050 RPB1_YEAST Saccharomyces cerevisiae S288c DNA-directed RNA polymerase II subunit RPB1
P20436 RPAB3_YEAST Saccharomyces cerevisiae S288c DNA-directed RNA polymerases I, II, and III subunit RPABC3
P16370 RPB3_YEAST Saccharomyces cerevisiae S288c DNA-directed RNA polymerase II subunit RPB3
P20435 RPAB2_YEAST Saccharomyces cerevisiae S288c DNA-directed RNA polymerases I, II, and III subunit RPABC2
P20434 RPAB1_YEAST Saccharomyces cerevisiae S288c DNA-directed RNA polymerases I, II, and III subunit RPABC1
P08518 RPB2_YEAST Saccharomyces cerevisiae S288c DNA-directed RNA polymerase II subunit RPB2
P38902 RPB11_YEAST Saccharomyces cerevisiae S288c DNA-directed RNA polymerase II subunit RPB11
P40422 RPAB4_YEAST Saccharomyces cerevisiae S288c DNA-directed RNA polymerases I, II, and III subunit RPABC4
P22139 RPAB5_YEAST Saccharomyces cerevisiae S288c DNA-directed RNA polymerases I, II, and III subunit RPABC5