PDB 2ppb

PDB Information

PDB2PPB
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Structural basis for substrate loading in bacterial RNA polymerase.
Vassylyev, D.G., Vassylyeva, M.N., Zhang, J., Palangat, M., Artsimovitch, I., Landick, R.
Nature
HeaderTransferase/Dna/Rna
Released2007-04-28
Resolution3.000
CATH Insert Date19 Jul, 2007

PDB Images (57)

PDB Prints

PDB Chains (16)

Chain ID Date inserted into CATH CATH Status
A 19 Jul, 2007 Chopped
B 19 Jul, 2007 Chopped
C 19 Jul, 2007 Chopped
D 19 Jul, 2007 Chopped
E 19 Jul, 2007 Chopped
G 19 Jul, 2007 Rejected
H 19 Jul, 2007 Rejected
I 19 Jul, 2007 Rejected
K 19 Jul, 2007 Chopped
L 19 Jul, 2007 Chopped
M 19 Jul, 2007 Chopped
N 19 Jul, 2007 Chopped
O 19 Jul, 2007 Chopped
X 19 Jul, 2007 Rejected
Y 19 Jul, 2007 Rejected
Z 19 Jul, 2007 Rejected

CATH Domains (40)

Domain ID Date inserted into CATH Superfamily CATH Status
2ppbA01 16 Aug, 2007 3.30.1360.10 Assigned
2ppbA02 16 Aug, 2007 2.170.120.12 Assigned
2ppbB01 16 Aug, 2007 3.30.1360.10 Assigned
2ppbB02 16 Aug, 2007 2.170.120.12 Assigned
2ppbC01 16 Aug, 2007 2.40.270.10 Assigned
2ppbC02 16 Aug, 2007 3.90.1100.10 Assigned
2ppbC03 16 Aug, 2007 3.90.1110.10 Assigned
2ppbC04 16 Aug, 2007 2.30.150.10 Assigned
2ppbC05 16 Aug, 2007 2.40.50.100 Assigned
2ppbC06 16 Aug, 2007 2.40.50.150 Assigned
2ppbD01 16 Feb, 2018 Holding pen
2ppbD02 16 Feb, 2018 Holding pen
2ppbD03 16 Feb, 2018 2.40.50.100 Assigned
2ppbD04 16 Feb, 2018 2.40.40.20 Assigned
2ppbD05 16 Feb, 2018 1.10.274.100 Assigned
2ppbD06 16 Feb, 2018 1.10.132.30 Assigned
2ppbD07 16 Feb, 2018 Holding pen
2ppbE00 16 Aug, 2007 3.90.940.10 Assigned
2ppbK01 16 Aug, 2007 3.30.1360.10 Assigned
2ppbK02 16 Aug, 2007 2.170.120.12 Assigned
2ppbL01 16 Aug, 2007 3.30.1360.10 Assigned
2ppbL02 16 Aug, 2007 2.170.120.12 Assigned
2ppbM01 16 Aug, 2007 2.40.270.10 Assigned
2ppbM02 16 Aug, 2007 3.90.1100.10 Assigned
2ppbM03 16 Aug, 2007 3.90.1110.10 Assigned
2ppbM04 16 Aug, 2007 2.30.150.10 Assigned
2ppbM05 16 Aug, 2007 2.40.50.100 Assigned
2ppbM06 16 Aug, 2007 2.40.50.150 Assigned
2ppbN01 16 Feb, 2018 Holding pen
2ppbN02 16 Feb, 2018 Holding pen
2ppbN03 16 Feb, 2018 2.40.50.100 Assigned
2ppbN04 16 Feb, 2018 2.40.40.20 Assigned
2ppbN05 16 Feb, 2018 1.10.40.90 Assigned
2ppbN06 16 Feb, 2018 Holding pen
2ppbN07 16 Feb, 2018 1.10.132.30 Assigned
2ppbN08 16 Feb, 2018 Holding pen
2ppbN09 16 Feb, 2018 3.90.105.10 Assigned
2ppbN10 16 Feb, 2018 2.40.50.100 Assigned
2ppbN11 16 Feb, 2018 3.30.60.280 Assigned
2ppbO00 16 Aug, 2007 3.90.940.10 Assigned

UniProtKB Entries (10)

Accession Gene ID Taxon Description
Q5SHR6 RPOA_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit alpha
Q8RQE9 RPOB_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit beta
Q5SHR6 RPOA_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit alpha
Q8RQE7 RPOZ_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit omega
Q8RQE8 RPOC_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit beta'
Q5SHR6 RPOA_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit alpha
Q8RQE7 RPOZ_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit omega
Q8RQE8 RPOC_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit beta'
Q5SHR6 RPOA_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit alpha
Q8RQE9 RPOB_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit beta
CATH-Gene3D is a Global Biodata Core Resource Learn more...