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PDB Information
| PDB | 2DY4 |
| Method | X-RAY DIFFRACTION |
| Host Organism | Escherichia coli BL21(DE3) |
| Gene Source | Enterobacteria phage RB69 |
| Primary Citation |
A structural rationale for stalling of a replicative DNA polymerase at the most common oxidative thymine lesion, thymine glycol.
Aller, P., Rould, M.A., Hogg, M., Wallace, S.S., Doublie, S.
Proc.Natl.Acad.Sci.USA
|
| Header | Transferase/Dna |
| Released | 2006-09-06 |
| Resolution | 2.650 |
| CATH Insert Date | 09 Jan, 2007 |
PDB Images (37)
2dy4A01
CATH Domain 2dy4A01
2dy4A02
CATH Domain 2dy4A02
2dy4A03
CATH Domain 2dy4A03
2dy4A04
CATH Domain 2dy4A04
2dy4A05
CATH Domain 2dy4A05
2dy4A06
CATH Domain 2dy4A06
2dy4B01
CATH Domain 2dy4B01
2dy4B02
CATH Domain 2dy4B02
2dy4B03
CATH Domain 2dy4B03
2dy4B04
CATH Domain 2dy4B04
2dy4B05
CATH Domain 2dy4B05
2dy4B06
CATH Domain 2dy4B06
2dy4C01
CATH Domain 2dy4C01
2dy4C02
CATH Domain 2dy4C02
2dy4C03
CATH Domain 2dy4C03
2dy4C04
CATH Domain 2dy4C04
2dy4C05
CATH Domain 2dy4C05
2dy4C06
CATH Domain 2dy4C06
2dy4D01
CATH Domain 2dy4D01
2dy4D02
CATH Domain 2dy4D02
2dy4D03
CATH Domain 2dy4D03
2dy4D04
CATH Domain 2dy4D04
2dy4D05
CATH Domain 2dy4D05
2dy4D06
CATH Domain 2dy4D06
PDB Chains (12)
| Chain ID | Date inserted into CATH | CATH Status |
| A | 09 Jan, 2007 | Chopped
|
| B | 09 Jan, 2007 | Chopped
|
| C | 09 Jan, 2007 | Chopped
|
| D | 09 Jan, 2007 | Chopped
|
| E | 09 Jan, 2007 | Rejected
|
| F | 09 Jan, 2007 | Rejected
|
| G | 09 Jan, 2007 | Rejected
|
| H | 09 Jan, 2007 | Rejected
|
| I | 09 Jan, 2007 | Rejected
|
| J | 09 Jan, 2007 | Rejected
|
| K | 09 Jan, 2007 | Rejected
|
| L | 09 Jan, 2007 | Rejected
|
CATH Domains (24)
| Domain ID | Date inserted into CATH | Superfamily | CATH Status |
| 2dy4A01 | 06 Jul, 2010 | 3.30.342.10 | Assigned
|
| 2dy4A02 | 06 Jul, 2010 | 3.30.420.10 | Assigned
|
| 2dy4A03 | 06 Jul, 2010 | 3.90.1600.10 | Assigned
|
| 2dy4A04 | 06 Jul, 2010 | 1.10.287.690 | Assigned
|
| 2dy4A05 | 06 Jul, 2010 | 1.20.1280.300 | Assigned
|
| 2dy4A06 | 06 Jul, 2010 | 3.40.1820.10 | Assigned
|
| 2dy4B01 | 06 Jul, 2010 | 3.30.342.10 | Assigned
|
| 2dy4B02 | 06 Jul, 2010 | 3.30.420.10 | Assigned
|
| 2dy4B03 | 06 Jul, 2010 | 3.90.1600.10 | Assigned
|
| 2dy4B04 | 06 Jul, 2010 | 1.10.287.690 | Assigned
|
| 2dy4B05 | 06 Jul, 2010 | 1.20.1280.300 | Assigned
|
| 2dy4B06 | 06 Jul, 2010 | 3.40.1820.10 | Assigned
|
| 2dy4C01 | 06 Jul, 2010 | 3.30.342.10 | Assigned
|
| 2dy4C02 | 06 Jul, 2010 | 3.30.420.10 | Assigned
|
| 2dy4C03 | 06 Jul, 2010 | 3.90.1600.10 | Assigned
|
| 2dy4C04 | 06 Jul, 2010 | 1.10.287.690 | Assigned
|
| 2dy4C05 | 06 Jul, 2010 | 1.20.1280.300 | Assigned
|
| 2dy4C06 | 06 Jul, 2010 | 3.40.1820.10 | Assigned
|
| 2dy4D01 | 06 Jul, 2010 | 3.30.342.10 | Assigned
|
| 2dy4D02 | 06 Jul, 2010 | 3.30.420.10 | Assigned
|
| 2dy4D03 | 06 Jul, 2010 | 3.90.1600.10 | Assigned
|
| 2dy4D04 | 06 Jul, 2010 | 1.10.287.690 | Assigned
|
| 2dy4D05 | 06 Jul, 2010 | 1.20.1280.300 | Assigned
|
| 2dy4D06 | 06 Jul, 2010 | 3.40.1820.10 | Assigned
|
UniProtKB Entries (4)
| Accession |
Gene ID |
Taxon |
Description |
| Q38087 |
DPOL_BPR69 |
Enterobacteria phage RB69 |
DNA-directed DNA polymerase |
| Q38087 |
DPOL_BPR69 |
Enterobacteria phage RB69 |
DNA-directed DNA polymerase |
| Q38087 |
DPOL_BPR69 |
Enterobacteria phage RB69 |
DNA-directed DNA polymerase |
| Q38087 |
DPOL_BPR69 |
Enterobacteria phage RB69 |
DNA-directed DNA polymerase |