PDB 1ykm

PDB Links
Overview

PDB Information

PDB	1YKM
Method	X-RAY DIFFRACTION
Host Organism	Escherichia coli
Gene Source	Pseudomonas putida
Primary Citation	Roles of the equatorial tyrosyl iron ligand of protocatechuate 3,4-dioxygenase in catalysis Valley, M.P., Brown, C.K., Burk, D.L., Vetting, M.W., Ohlendorf, D.H., Lipscomb, J.D. Biochemistry
Header	Oxidoreductase
Released	2005-01-18
Resolution	2.220
CATH Insert Date	05 Mar, 2006

PDB Images (25)

1ykm

PDB 1ykm

1ykmA

PDB Chain 1ykmA

1ykmB

PDB Chain 1ykmB

1ykmC

PDB Chain 1ykmC

1ykmD

PDB Chain 1ykmD

1ykmE

PDB Chain 1ykmE

1ykmF

PDB Chain 1ykmF

1ykmG

PDB Chain 1ykmG

1ykmH

PDB Chain 1ykmH

1ykmI

PDB Chain 1ykmI

1ykmJ

PDB Chain 1ykmJ

1ykmK

PDB Chain 1ykmK

1ykmL

PDB Chain 1ykmL

1ykmA00

CATH Domain 1ykmA00

1ykmB00

CATH Domain 1ykmB00

1ykmC00

CATH Domain 1ykmC00

1ykmD00

CATH Domain 1ykmD00

1ykmE00

CATH Domain 1ykmE00

1ykmF00

CATH Domain 1ykmF00

1ykmG00

CATH Domain 1ykmG00

1ykmH00

CATH Domain 1ykmH00

1ykmI00

CATH Domain 1ykmI00

1ykmJ00

CATH Domain 1ykmJ00

1ykmK00

CATH Domain 1ykmK00

1ykmL00

CATH Domain 1ykmL00

PDB Prints

PDB Chains (12)

Chain ID	Date inserted into CATH	CATH Status
A	05 Mar, 2006	Chopped
B	05 Mar, 2006	Chopped
C	05 Mar, 2006	Chopped
D	05 Mar, 2006	Chopped
E	05 Mar, 2006	Chopped
F	05 Mar, 2006	Chopped
G	05 Mar, 2006	Chopped
H	05 Mar, 2006	Chopped
I	05 Mar, 2006	Chopped
J	05 Mar, 2006	Chopped
K	05 Mar, 2006	Chopped
L	05 Mar, 2006	Chopped

CATH Domains (12)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
1ykmA00	10 Mar, 2006	2.60.130.10	Assigned
1ykmB00	10 Mar, 2006	2.60.130.10	Assigned
1ykmC00	10 Mar, 2006	2.60.130.10	Assigned
1ykmD00	10 Mar, 2006	2.60.130.10	Assigned
1ykmE00	10 Mar, 2006	2.60.130.10	Assigned
1ykmF00	10 Mar, 2006	2.60.130.10	Assigned
1ykmG00	10 Mar, 2006	2.60.130.10	Assigned
1ykmH00	10 Mar, 2006	2.60.130.10	Assigned
1ykmI00	10 Mar, 2006	2.60.130.10	Assigned
1ykmJ00	10 Mar, 2006	2.60.130.10	Assigned
1ykmK00	10 Mar, 2006	2.60.130.10	Assigned
1ykmL00	10 Mar, 2006	2.60.130.10	Assigned

UniProtKB Entries (12)

Accession	Gene ID	Taxon	Description
P00437	PCXB_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase beta chain
P00437	PCXB_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase beta chain
P00437	PCXB_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase beta chain
P00437	PCXB_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase beta chain
P00436	PCXA_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase alpha chain
P00436	PCXA_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase alpha chain
P00437	PCXB_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase beta chain
P00437	PCXB_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase beta chain
P00436	PCXA_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase alpha chain
P00436	PCXA_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase alpha chain
P00436	PCXA_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase alpha chain
P00436	PCXA_PSEPU	Pseudomonas putida	Protocatechuate 3,4-dioxygenase alpha chain