CATH Domain: 1n0rA00 XML data for domain: 1n0rA00

Molscript image for 1n0rA00
1n0rA00
PDB coordinates for domain 1n0rA00

PDB 1n0r, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.25 Alpha Horseshoe
1.25.40 Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
1.25.40.20 Gene3D
1.25.40.20.5
1.25.40.20.5.1
1.25.40.20.5.1.1
1.25.40.20.5.1.1.1
1.25.40.20.5.1.1.1.1

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Segment boundaries for domain 1n0rA00

Chopping figure for domain 1n0rA00
DomainStart PDB ResidueStop PDB Residue
1n0rA00 1 126

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 1.25.40.20.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3c5rA00 93.83 BRCA1-associated RING domain protein 1Protein homodimerization activityRNA bindingBRCA1-A complexNegative regulation of apoptosis 1.25.40.20 125 42 95 1.38 1.45
1ympA00 93.30 Negative regulation of gene-specific transcriptionNeural tube developmentNeurogenic locus notch homolog protein 1Regulation of somitogenesisRegulation of epithelial cell proliferation involved in prostate gland development 1.25.40.20 131 35 92 1.06 1.15
3ehrA02 92.18 Osteoclast-stimulating factor 1OssificationIdentical protein bindingHomo sapiensSignal transduction 1.25.40.20 114 32 89 1.18 1.32
1n0qB00 91.62 1.25.40.20 93 100 73 1.05 1.42
1ycsB01 91.17 Induction of apoptosisNF-kappaB bindingNegative regulation of cell cycleHomo sapiensApoptosis-stimulating of p53 protein 2 1.25.40.20 128 29 97 1.90 1.95
1awcB00 91.03 Mus musculusGA-binding protein subunit beta-1 1.25.40.20 153 42 79 1.04 1.32
1bi7B00 90.83 Bladder cancerSenescencePathways in cancerNon-small cell lung cancerProtein binding 1.25.40.20 125 38 97 2.06 2.11
1s70B01 87.82 Focal adhesionGallus gallusProtein phosphatase 1 regulatory subunit 12ARegulation of actin cytoskeletonProtein phosphatase 1 regulatory subunit 12A 1.25.40.20 162 34 75 1.99 2.62
1uohA00 82.20 26S proteasome non-ATPase regulatory subunit 10CytoplasmProteasome regulatory particleActin cytoskeletonHomo sapiens 1.25.40.20 223 42 56 1.95 3.45
2dznA00 81.97 26S proteasome non-ATPase regulatory subunit 10Proteasome regulatory particle assemblyProbable 26S proteasome regulatory subunit p28NucleusSaccharomyces cerevisiae 1.25.40.20 226 38 55 1.71 3.07
1iknD00 80.80 Cytoplasmic sequestering of NF-kappaBNeurotrophin signaling pathwayT cell receptor signaling pathwayApoptosisAdipocytokine signaling pathway 1.25.40.20 215 41 58 1.94 3.34
1k1aA00 80.41 Transcription factor bindingBcl3/NF-kappaB2 complexNegative regulation of apoptosisCytoplasmI-kappaB kinase/NF-kappaB cascade 1.25.40.20 228 37 55 1.96 3.55
1wdyA00 77.80 2-5A-dependent ribonucleaseRibonuclease L [EC:3.1.26.-]Homo sapiens 1.25.40.20 285 45 44 1.82 4.12
1sw6A00 76.50 Regulatory protein SWI6MAPK signaling pathway - yeastPositive regulation of gene-specific transcriptionMeiosis - yeastTranscription coactivator activity 1.25.40.20 254 30 49 2.34 4.72
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Displaying entries 1 to 14 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1n0rA00
NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH
LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1n0rA00
NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH
LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:44

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"