CATH Domain: 1ek6A01 XML data for domain: 1ek6A01

Molscript image for 1ek6A01
1ek6A01
PDB coordinates for domain 1ek6A01

PDB 1ek6, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.25 UDP-galactose 4-epimerase; domain 1
3.90.25.10 UDP-galactose 4-epimerase, domain 1 Gene3D
3.90.25.10.6
3.90.25.10.6.1
3.90.25.10.6.1.1
3.90.25.10.6.1.1.1
3.90.25.10.6.1.1.1.1

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Segment boundaries for domain 1ek6A01

Chopping figure for domain 1ek6A01
DomainStart PDB ResidueStop PDB Residue
1ek6A01 190 239
1ek6A01 271 346
1ek6A02 3 189
1ek6A02 240 270

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.90.25.10.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1z7bA02 79.67 Amino sugar and nucleotide sugar metabolismOxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorHydroxymethyl-, formyl- and related transferase activityUDP-GlcUA decarboxylase/UDP-L-Ara4N formyltransferase [EC:1.1.1.- 2.1.2.-]Bifunctional polymyxin resistance protein ArnA 3.90.25.10 89 5 62 3.12 4.98
1n7hB01 79.42 Amino sugar and nucleotide sugar metabolismGDPmannose 4,6-dehydratase [EC:4.2.1.47]Fructose and mannose metabolismCytosolMetabolic pathways 3.90.25.10 101 7 69 3.46 4.95
1e6uA02 79.37 Amino sugar and nucleotide sugar metabolismFructose and mannose metabolismMetabolic pathwaysGDP-L-fucose synthaseGDP-L-fucose synthase [EC:1.1.1.271] 3.90.25.10 94 10 68 3.16 4.63
1rkxB02 79.07 Amino sugar and nucleotide sugar metabolismCDP-glucose 4,6-dehydratase [EC:4.2.1.45]CDP-D-glucose-4,6-dehydrataseYersinia pseudotuberculosis 3.90.25.10 154 15 64 3.04 4.68
1t2aA02 78.64 Amino sugar and nucleotide sugar metabolismGDPmannose 4,6-dehydratase [EC:4.2.1.47]GDP-mannose 4,6 dehydrataseFructose and mannose metabolismMetabolic pathways 3.90.25.10 106 11 65 3.17 4.81
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ek6A01
GAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRTGTGYSVLQMVQAMEKASGKKIPYKVVARR
EGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ek6A01
GAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRTGTGYSVLQMVQAMEKASGKKIPYKVVARR
EGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGTQA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:27

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"