The name of this superfamily has been modified since the most recent official CATH+ release (v4_4_0). At the point of the last release, this superfamily was named:
"Cellobiose dehydrogenase, cytochrome domain
".
2.60.40.1210
superfamily
Functional Families
Overview of the Structural Clusters (SC) and Functional Families within this CATH Superfamily. Clusters with a representative structure are represented by a filled circle.
Superfamily: Cellobiose dehydrogenase, cytochrome domain
Cellobiose dehydrogenase (CHD; EC:1.1.99.18) is found in a variety of fungi, including white rot, brown rot and plant pathogen fungi. The enzyme is the only known extracellular flavocytochrome and it degrades both cellulose and lignin. Specifically, CDHs oxidise cellobiose, cellodextrins, and lactose to corresponding lactones, utilising a variety of electron acceptors PMID:16787264. It comprises two domains: a cytochrome domain containing a b-type haem, which is linked through a peptide linker to a large flavodehydrogenase domain containing FAD as a cofactor PMID:9920875. The two domains can be separated proteolytically to yield a functional cytochrome and a flavodehydrogenase PMID:10673428.
This superfamily represents the b-type cytochrome domain. This domain assumes an immunoglobulin-like beta-sandwich fold consisting of 7 beta-strands in 2 sheets with a Greek key topology; the haem iron is ligated by a Met/His couple and is docked at the exterior of the enzyme PMID:10673428. It is found at the N-terminus of these enzymes, and belongs to the DOMON domain superfamily, a ligand-interacting motif found in all three kingdoms of life PMID:17878204.
PFAM:PF16010, INTERPRO:IPR015920,DOI:10.1016/S0969-2126(00)00082-4
GO Diversity
Unique GO annotations
4 Unique GO terms
EC Diversity
Unique EC annotations
1 Unique EC terms
Species Diversity
Unique species annotations
850 Unique species
Sequence/Structure Diversity
Overview of the sequence / structure diversity of this superfamily compared to other superfamilies in CATH. Click on the chart to view the data in more detail.
Superfamily Summary
A general summary of information for this superfamily.
| Structures | |
|---|---|
| Domains: | 10 |
| Domain clusters (>95% seq id): | 2 |
| Domain clusters (>35% seq id): | 2 |
| Unique PDBs: | 5 |
| Alignments | |
| Structural Clusters (5A): | 1 |
| Structural Clusters (9A): | 1 |
| FunFam Clusters: | 7 |
| Function | |
| Unique EC: | 1 |
| Unique GO: | 4 |
| Taxonomy | |
| Unique Species: | 850 |
