S100 Family: 1.20.5.420.1.1.1.1

Molscript image for 2rklB00
Representative domain: 2rklB00
PDB coordinates for domain 2rklB00

Classification Lineage (1.20.5.420.1.1.1.1)

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.5 Single alpha-helices involved in coiled-coils or other helix-helix interfaces
1.20.5.420 Immunoglobulin FC, subunit C Gene3D
1.20.5.420.1
1.20.5.420.1.1
1.20.5.420.1.1.1
1.20.5.420.1.1.1.1

Summary of Non-Redundant Representatives
- - - - - - - - 6

S100 Count Entries in S100 Family 1.20.5.420.1.1.1.1 (6)

CATH Level CATH code Domain ID Keywords Thumbnail
1.20.5.420.1.1.1.1.1 2rklB00 vacuolar protein sorting-associated protein VTA1, positive regulation of protein oligomerization, multivesicular body, Saccharomyces cerevisiae, Endocytosis, protein binding, late endosome to vacuole transport via multivesicular body sorting pathway, Vacuolar protein sorting-associated protein VTA1, membrane fraction, ATPase activator activity Molscript image for 2rklB00
1.20.5.420.1.1.1.1.2 2rklF00 ATPase activator activity, membrane fraction, Vacuolar protein sorting-associated protein VTA1, late endosome to vacuole transport via multivesicular body sorting pathway, protein binding, Endocytosis, Saccharomyces cerevisiae, multivesicular body, positive regulation of protein oligomerization, vacuolar protein sorting-associated protein VTA1 Molscript image for 2rklF00
1.20.5.420.1.1.1.1.3 2rklA00 Saccharomyces cerevisiae, positive regulation of protein oligomerization, vacuolar protein sorting-associated protein VTA1, multivesicular body, membrane fraction, Vacuolar protein sorting-associated protein VTA1, ATPase activator activity, Endocytosis, late endosome to vacuole transport via multivesicular body sorting pathway, protein binding Molscript image for 2rklA00
1.20.5.420.1.1.1.1.4 2rklC00 vacuolar protein sorting-associated protein VTA1, positive regulation of protein oligomerization, multivesicular body, Saccharomyces cerevisiae, Endocytosis, protein binding, late endosome to vacuole transport via multivesicular body sorting pathway, Vacuolar protein sorting-associated protein VTA1, membrane fraction, ATPase activator activity Molscript image for 2rklC00
1.20.5.420.1.1.1.1.5 2rklE00 Endocytosis, protein binding, late endosome to vacuole transport via multivesicular body sorting pathway, Vacuolar protein sorting-associated protein VTA1, membrane fraction, ATPase activator activity, vacuolar protein sorting-associated protein VTA1, positive regulation of protein oligomerization, multivesicular body, Saccharomyces cerevisiae Molscript image for 2rklE00
1.20.5.420.1.1.1.1.6 2rklD00 positive regulation of protein oligomerization, vacuolar protein sorting-associated protein VTA1, multivesicular body, Saccharomyces cerevisiae, Endocytosis, late endosome to vacuole transport via multivesicular body sorting pathway, protein binding, membrane fraction, Vacuolar protein sorting-associated protein VTA1, ATPase activator activity Molscript image for 2rklD00

The information on Functional Families (FunFams) is currently being updated and will be released by the end of March 2012. The pages will include the following features:
  • Multiple alignments for each functional family
  • Representative structure for each functional with known catalytic and interface residues highlighted, along with conserved residues predicted by scorecons
  • Detailed functional information on diversity and conservation within Functional families
  • Multi-domain architectures
In the meantime, please find a summary of information on the FunFams and protein networks within this superfamily on the Gene3D pages:
http://gene3d.biochem.ucl.ac.uk/superfamily/?accession=1.20.5.420.1.1.1.1