# STOCKHOLM 1.0 #=GF ID 3.10.20.90/FF/000211 #=GF DE Polyubiquitin 9 #=GF AC 3.10.20.90/FF/000211 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 91.071 #=GS Q9FHQ6/1-78 AC Q9FHQ6 #=GS Q9FHQ6/1-78 OS Arabidopsis thaliana #=GS Q9FHQ6/1-78 DE Polyubiquitin 9 #=GS Q9FHQ6/1-78 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9FHQ6/1-78 DR GO; GO:0005618; GO:0005730; GO:0005774; GO:0006511; GO:0009735; #=GS R9PY16/229-300 AC R9PY16 #=GS R9PY16/229-300 OS Drosophila melanogaster #=GS R9PY16/229-300 DE Uncharacterized protein #=GS R9PY16/229-300 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS R9PY16/229-300 DR GO; GO:0008340; GO:0016567; GO:0031386; GO:2000242; #=GS A9SDW2/265-349 AC A9SDW2 #=GS A9SDW2/265-349 OS Physcomitrella patens #=GS A9SDW2/265-349 DE Predicted protein #=GS A9SDW2/265-349 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS Q7XDE7/89-168 AC Q7XDE7 #=GS Q7XDE7/89-168 OS Oryza sativa Japonica Group #=GS Q7XDE7/89-168 DE Os10g0475900 protein #=GS Q7XDE7/89-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS Q7PUN2/1-76 AC Q7PUN2 #=GS Q7PUN2/1-76 OS Anopheles gambiae #=GS Q7PUN2/1-76 DE AGAP001969-PA #=GS Q7PUN2/1-76 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS Q7PUQ6/1-76 AC Q7PUQ6 #=GS Q7PUQ6/1-76 OS Anopheles gambiae #=GS Q7PUQ6/1-76 DE AGAP001970-PA #=GS Q7PUQ6/1-76 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS A0A0N5CVL8/323-402 AC A0A0N5CVL8 #=GS A0A0N5CVL8/323-402 OS Thelazia callipaeda #=GS A0A0N5CVL8/323-402 DE Uncharacterized protein #=GS A0A0N5CVL8/323-402 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Thelazioidea; Thelaziidae; Thelazia; Thelazia callipaeda; #=GS A8X7Y8/229-312 AC A8X7Y8 #=GS A8X7Y8/229-312 OS Caenorhabditis briggsae #=GS A8X7Y8/229-312 DE Protein CBR-UBQ-1 #=GS A8X7Y8/229-312 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS I1I4N3/88-168 AC I1I4N3 #=GS I1I4N3/88-168 OS Brachypodium distachyon #=GS I1I4N3/88-168 DE Uncharacterized protein #=GS I1I4N3/88-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A2T8I250/64-140 AC A0A2T8I250 #=GS A0A2T8I250/64-140 OS Panicum hallii #=GS A0A2T8I250/64-140 DE Uncharacterized protein #=GS A0A2T8I250/64-140 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; #=GS A0A1B6QK90/64-142 AC A0A1B6QK90 #=GS A0A1B6QK90/64-142 OS Sorghum bicolor #=GS A0A1B6QK90/64-142 DE Uncharacterized protein #=GS A0A1B6QK90/64-142 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A287VW32/59-134 AC A0A287VW32 #=GS A0A287VW32/59-134 OS Hordeum vulgare subsp. vulgare #=GS A0A287VW32/59-134 DE Uncharacterized protein #=GS A0A287VW32/59-134 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS C0HE51/80-157 AC C0HE51 #=GS C0HE51/80-157 OS Zea mays #=GS C0HE51/80-157 DE Uncharacterized protein #=GS C0HE51/80-157 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A0E0EYV0/93-172 AC A0A0E0EYV0 #=GS A0A0E0EYV0/93-172 OS Oryza meridionalis #=GS A0A0E0EYV0/93-172 DE Uncharacterized protein #=GS A0A0E0EYV0/93-172 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0E0R0C2/89-168 AC A0A0E0R0C2 #=GS A0A0E0R0C2/89-168 OS Oryza rufipogon #=GS A0A0E0R0C2/89-168 DE Uncharacterized protein #=GS A0A0E0R0C2/89-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0M8Q1/87-166 AC A0A0E0M8Q1 #=GS A0A0E0M8Q1/87-166 OS Oryza punctata #=GS A0A0E0M8Q1/87-166 DE Uncharacterized protein #=GS A0A0E0M8Q1/87-166 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0D3HEP1/89-168 AC A0A0D3HEP1 #=GS A0A0D3HEP1/89-168 OS Oryza barthii #=GS A0A0D3HEP1/89-168 DE Uncharacterized protein #=GS A0A0D3HEP1/89-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0ITY3/89-168 AC A0A0E0ITY3 #=GS A0A0E0ITY3/89-168 OS Oryza sativa f. spontanea #=GS A0A0E0ITY3/89-168 DE Uncharacterized protein #=GS A0A0E0ITY3/89-168 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS A0A084VHL5/1-76 AC A0A084VHL5 #=GS A0A084VHL5/1-76 OS Anopheles sinensis #=GS A0A084VHL5/1-76 DE AGAP001969-PA-like protein #=GS A0A084VHL5/1-76 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Anopheles; Laticorn; Myzorhynchus; hyrcanus group; Anopheles sinensis; #=GS A0A182VK70/1-76 AC A0A182VK70 #=GS A0A182VK70/1-76 OS Anopheles merus #=GS A0A182VK70/1-76 DE Uncharacterized protein #=GS A0A182VK70/1-76 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles merus; #=GS A0A2C9GPA7/1-76 AC A0A2C9GPA7 #=GS A0A2C9GPA7/1-76 OS Anopheles arabiensis #=GS A0A2C9GPA7/1-76 DE Uncharacterized protein #=GS A0A2C9GPA7/1-76 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles arabiensis; #=GS A0A182UDV6/369-444 AC A0A182UDV6 #=GS A0A182UDV6/369-444 OS Anopheles melas #=GS A0A182UDV6/369-444 DE Uncharacterized protein #=GS A0A182UDV6/369-444 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles melas; #=GS A2Z8I2/83-162 AC A2Z8I2 #=GS A2Z8I2/83-162 OS Oryza sativa Indica Group #=GS A2Z8I2/83-162 DE Uncharacterized protein #=GS A2Z8I2/83-162 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS B6TMW2/80-157 AC B6TMW2 #=GS B6TMW2/80-157 OS Zea mays #=GS B6TMW2/80-157 DE Polyubiquitin containing 7 ubiquitin monomers #=GS B6TMW2/80-157 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS I1IK75/63-143 AC I1IK75 #=GS I1IK75/63-143 OS Brachypodium distachyon #=GS I1IK75/63-143 DE Uncharacterized protein #=GS I1IK75/63-143 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS I1IPJ0/58-134 AC I1IPJ0 #=GS I1IPJ0/58-134 OS Brachypodium distachyon #=GS I1IPJ0/58-134 DE Uncharacterized protein #=GS I1IPJ0/58-134 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A182V8B6/1-76 AC A0A182V8B6 #=GS A0A182V8B6/1-76 OS Anopheles merus #=GS A0A182V8B6/1-76 DE Uncharacterized protein #=GS A0A182V8B6/1-76 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles merus; #=GS A0A2C9GPH1/1-76 AC A0A2C9GPH1 #=GS A0A2C9GPH1/1-76 OS Anopheles arabiensis #=GS A0A2C9GPH1/1-76 DE Uncharacterized protein #=GS A0A2C9GPH1/1-76 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles arabiensis; #=GF SQ 28 Q9FHQ6/1-78 --MSMQIHAK-----TLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLI--------FSGKLLDDGRTLADYSIQKDSILHLALRLRGG------ R9PY16/229-300 ----MQIFVK-----TLTGKTITLEVEPSDTIKHVKARIHDKDGIPPDHQRLI--------FAGKQLEDGRTLSDYNIQKESTLHSHFK---------- A9SDW2/265-349 CGSSFHFFVK-----TVAGKSLVIDLKSFHTVEDVKKKVHIKEGIAIHKQKLL--------FGDVELEDNKTLFEYGIEVDSILRLMV-IRGGKSSIGS Q7XDE7/89-168 -TDAIQISVRI----PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILM--------YAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDK------ Q7PUN2/1-76 ----MQIFVK-----MLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRMI--------FAGKQLEDGRQLQEYSIIKGSTIHLVLRLKGG------ Q7PUQ6/1-76 ----MQIFVK-----TLTGKTITLDVIASETVLDIKSKIEQREGIAPDQQRII--------FAGKQLDDGRIISDYNIQHGSTMHLVLRLKGG------ A0A0N5CVL8/323-402 ---GMQIFVK-----TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFVL-----YSGKQLEDGRTLSDYNIQKESTLHLVLRLRGG------ A8X7Y8/229-312 ----MQIFVK-----TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQHCKIEVASINQKISGKQLEDGRTLSDYNIQKESTLHLVLRLRGG------ I1I4N3/88-168 --DRMQISVDIPSDVPSDGKTIRLNMKKSNKVVDVKAEIEQKEGIPINRQMLI--------YEGRHLENNHMLSQCGLTNDPALLLLVRPT-------- A0A2T8I250/64-140 -TDGMQISVSI----PSVGKIIKLNLKKSQSVADVKSEIEQKVGIPLDEQILM--------YGCQQLEDNKLLSQCGLSNGHTLHVLVCP--------- A0A1B6QK90/64-142 -TDGMQISVSI----PSVGKTIKLNLKKSQSVADVKAVIEQKGGIPLDEQILM--------YGCQKLEDNKLLSQCGLSNGHTLHVLVCPTD------- A0A287VW32/59-134 ------IKVK-----TLTGKEIQIDIEPTDTVDRIKERVEEKEGIPPVQQRLI--------FGGKQIADDKTAQDYKIKAGDVLHLVLALRGGAC---- C0HE51/80-157 -TDGMQISVSI----PSVWKTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILM--------HGCQKLEDNKLLSQCGLSNGHTLHVLVRPT-------- A0A0E0EYV0/93-172 -TDAIQISVRI----PSVGKTTKLNMRKSNSIADVKAEIEQEEGILMNEQILM--------YAGQQLEDNHLLSQCDLRNDQTFHVLVCPNDK------ A0A0E0R0C2/89-168 -TDAIQISVRI----PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILM--------YAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDK------ A0A0E0M8Q1/87-166 -TDAIQISVKI----PSVGKTTKLNMRKSNRIADVKAEIEQEEGIPMNEQILM--------YAGQQLEDNHLLSQCDLRNDQTFHVLVCPNDK------ A0A0D3HEP1/89-168 -TDAIQISVRI----PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILM--------YAGQQLEDNHLLSQCDLRNDQTFHVLVCPNDK------ A0A0E0ITY3/89-168 -TDAIQISVRI----PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILM--------YAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDK------ A0A084VHL5/1-76 ----MQIFVK-----MLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRMI--------FAGKQLEDGRQLQEYSIIKGSTIHLVLRLKGG------ A0A182VK70/1-76 ----MQIFVK-----MLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRMI--------FAGKQLEDGRQLQEYSIIKGSTIHLVLRLKGG------ A0A2C9GPA7/1-76 ----MQIFVK-----MLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRMI--------FAGKQLEDGRQLQEYSIIKGSTIHLVLRLKGG------ A0A182UDV6/369-444 ----MQIFVR-----MLTGKTIAIDTEPEATVESVKKQIDEREEIPPNQQRMI--------FAGKQLEDGRQLQEYSIIKASTIHLVLRLKGG------ A2Z8I2/83-162 -TDAIQISVRI----PSVGKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILM--------YAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDK------ B6TMW2/80-157 -TDGMQISVSI----PSVWKTIKLNVMKSQSVADVKAMIEQMGGIPLDEQILM--------HGCQKLEDNKLLSQCGLSNGHTLHVLVRPT-------- I1IK75/63-143 -QEKMQIYVKE----TLADRTIILEVDSLDTIGNVKAKMEDKDGFLKGQQCLI--------FGSKQLEDERTLADHNVLKDSTLLLVLHPSLPR----- I1IPJ0/58-134 -----TIKIK-----TLTGKEIAIDIEPTDTIDRIKERIEEKEGIPPVQQRLI--------FGGKQIADDKTAMDYNIKAGDVLHLVLALRGGRC---- A0A182V8B6/1-76 ----MQIFVK-----TLTGKTITLDVIASETVLDIKSKIEQREGIAPDQQRII--------FAGKQLDDGRIISDYNIQHGSTMHLVLRLKGG------ A0A2C9GPH1/1-76 ----MQIFVK-----TLTGKTITLDVIASETVLDIKSKIEQREGIAPDQQRII--------FAGKQLDDGRIISDYNIQHGSTMHLVLRLKGG------ #=GC scorecons 011157848510000555787646653454574579548654678545584660000000065656878554755646345465765645333000000 #=GC scorecons_70 _____**_*_________****_*_______*__**__**__***____*_**________*_*_****___*__*_*____*_**_*___________ #=GC scorecons_80 _____**_*_________**______________**__*____**____*________________*_*_______________*______________ #=GC scorecons_90 ______*_*__________*_______________*________*____*________________*_*______________________________ //