# STOCKHOLM 1.0 #=GF ID 2.40.30.120/FF/000002 #=GF DE Capsid protein #=GF AC 2.40.30.120/FF/000002 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 16.946 #=GS 3lqeA02/65-178 AC Q2V8W4 #=GS 3lqeA02/65-178 OS Murine norovirus 1 #=GS 3lqeA02/65-178 DE Capsid protein #=GS 3lqeA02/65-178 DR CATH; 3lqe; A:286-399; #=GS 3lqeA02/65-178 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS 3lqeA02/65-178 DR GO; GO:0019049; #=GS 3lq6B02/65-178 AC Q2V8W4 #=GS 3lq6B02/65-178 OS Murine norovirus 1 #=GS 3lq6B02/65-178 DE Capsid protein #=GS 3lq6B02/65-178 DR CATH; 3lq6; B:286-399; #=GS 3lq6B02/65-178 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS 3lq6B02/65-178 DR GO; GO:0019049; #=GS 3lq6A02/65-178 AC Q2V8W4 #=GS 3lq6A02/65-178 OS Murine norovirus 1 #=GS 3lq6A02/65-178 DE Capsid protein #=GS 3lq6A02/65-178 DR CATH; 3lq6; A:286-399; #=GS 3lq6A02/65-178 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS 3lq6A02/65-178 DR GO; GO:0019049; #=GS 6e48B02/58-171 AC Q80J94 #=GS 6e48B02/58-171 OS Murine norovirus 1 #=GS 6e48B02/58-171 DE Capsid protein #=GS 6e48B02/58-171 DR CATH; 6e48; B:286-399; #=GS 6e48B02/58-171 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS 6e48A02/58-171 AC Q80J94 #=GS 6e48A02/58-171 OS Murine norovirus 1 #=GS 6e48A02/58-171 DE Capsid protein #=GS 6e48A02/58-171 DR CATH; 6e48; A:286-399; #=GS 6e48A02/58-171 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS 6e47B02/58-171 AC Q80J94 #=GS 6e47B02/58-171 OS Murine norovirus 1 #=GS 6e47B02/58-171 DE Capsid protein #=GS 6e47B02/58-171 DR CATH; 6e47; B:286-399; #=GS 6e47B02/58-171 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS 6e47A02/58-171 AC Q80J94 #=GS 6e47A02/58-171 OS Murine norovirus 1 #=GS 6e47A02/58-171 DE Capsid protein #=GS 6e47A02/58-171 DR CATH; 6e47; A:286-399; #=GS 6e47A02/58-171 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS 6c6qB02/58-171 AC Q80J94 #=GS 6c6qB02/58-171 OS Murine norovirus 1 #=GS 6c6qB02/58-171 DE Capsid protein #=GS 6c6qB02/58-171 DR CATH; 6c6q; B:286-399; #=GS 6c6qB02/58-171 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS 6c6qA02/58-171 AC Q80J94 #=GS 6c6qA02/58-171 OS Murine norovirus 1 #=GS 6c6qA02/58-171 DE Capsid protein #=GS 6c6qA02/58-171 DR CATH; 6c6q; A:286-399; #=GS 6c6qA02/58-171 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS 5or7B02/286-399 AC A7YK37 #=GS 5or7B02/286-399 OS Murine norovirus GV/CR10/2005/USA #=GS 5or7B02/286-399 DE Capsid protein #=GS 5or7B02/286-399 DR CATH; 5or7; B:286-399; #=GS 5or7B02/286-399 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS 5or7A02/286-399 AC A7YK37 #=GS 5or7A02/286-399 OS Murine norovirus GV/CR10/2005/USA #=GS 5or7A02/286-399 DE Capsid protein #=GS 5or7A02/286-399 DR CATH; 5or7; A:286-399; #=GS 5or7A02/286-399 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS Q2V8W4/286-399 AC Q2V8W4 #=GS Q2V8W4/286-399 OS Murine norovirus 1 #=GS Q2V8W4/286-399 DE Capsid protein #=GS Q2V8W4/286-399 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS Q2V8W4/286-399 DR GO; GO:0019049; #=GS Q80J94/286-399 AC Q80J94 #=GS Q80J94/286-399 OS Murine norovirus 1 #=GS Q80J94/286-399 DE Capsid protein #=GS Q80J94/286-399 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS A0A218KK88/286-399 AC A0A218KK88 #=GS A0A218KK88/286-399 OS Murine norovirus #=GS A0A218KK88/286-399 DE VP1 #=GS A0A218KK88/286-399 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS A7YK37/286-399 AC A7YK37 #=GS A7YK37/286-399 OS Murine norovirus GV/CR10/2005/USA #=GS A7YK37/286-399 DE Capsid protein #=GS A7YK37/286-399 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS G8JHT6/286-399 AC G8JHT6 #=GS G8JHT6/286-399 OS Murine norovirus #=GS G8JHT6/286-399 DE Capsid protein VP1 #=GS G8JHT6/286-399 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS Q2XPS0/67-180 AC Q2XPS0 #=GS Q2XPS0/67-180 OS Murine norovirus #=GS Q2XPS0/67-180 DE Capsid protein #=GS Q2XPS0/67-180 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS Q2XPR9/67-180 AC Q2XPR9 #=GS Q2XPR9/67-180 OS Murine norovirus #=GS Q2XPR9/67-180 DE Capsid protein #=GS Q2XPR9/67-180 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS Q2XPS7/67-180 AC Q2XPS7 #=GS Q2XPS7/67-180 OS Murine norovirus #=GS Q2XPS7/67-180 DE Capsid protein #=GS Q2XPS7/67-180 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GS W8QL21/21-134 AC W8QL21 #=GS W8QL21/21-134 OS Murine norovirus #=GS W8QL21/21-134 DE Capsid protein VP1 #=GS W8QL21/21-134 DR ORG; Viruses; Caliciviridae; Norovirus; Norwalk virus; #=GF SQ 20 3lqeA02/65-178 VSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY 3lq6B02/65-178 VSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY 3lq6A02/65-178 VSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY 6e48B02/58-171 VSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY 6e48A02/58-171 VSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY 6e47B02/58-171 VSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY 6e47A02/58-171 VSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY 6c6qB02/58-171 VSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY 6c6qA02/58-171 VSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY 5or7B02/286-399 VSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNVDQAPYQGRVYASLTAVASLDLVDGRVRAVPRSIY 5or7A02/286-399 VSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNVDQAPYQGRVYASLTAVASLDLVDGRVRAVPRSIY Q2V8W4/286-399 VSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY Q80J94/286-399 VSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY A0A218KK88/286-399 VSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIY A7YK37/286-399 VSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNVDQAPYQGRVYASLTAVASLDLVDGRVRAVPRSIY G8JHT6/286-399 VSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNVDQAPYQGRVYASTTAAASLDLVDGRVRAVPRSIY Q2XPS0/67-180 VSCFAAEAAYQYQSGTGQVAIFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKGGDKLKVTTFEMVLGPTTNADQAPYQGRVHASVSAVAPLDLVDGRVRAVPRSIY Q2XPR9/67-180 VSCFAAEAAYQYQSGTGQVAIFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKGGDKLKVTTFEMVLGPTTNADQAPYQGRVHASVSAVAPLDLVDGRVRAVPRSIY Q2XPS7/67-180 VSCFAAEAAYEFQAGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETAKAGDKLRVTTFEMVLGPTTNVDQAPYQGKVYASLTAAASLDLVDGRVRAVPRSIF W8QL21/21-134 VSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNVDQAPYQGRVYASITAAASLDLVDGRVRAVPRSIY #=GC scorecons 999999999957979997996999999999999999999999999999999999999989699998999999799999969999999896996696969999999999999998 #=GC scorecons_70 **********_*************************************************_****************************_**_**_****************** #=GC scorecons_80 **********_******_**_***************************************_******************_*********_**__*_*_**************** #=GC scorecons_90 **********__*_***_**_*************************************_*_***********_******_*********_**__*_*_**************** //