# STOCKHOLM 1.0
#=GF ID 2.30.30.240/FF/000002
#=GF DE Ribosome maturation factor rimM
#=GF AC 2.30.30.240/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 86.540
#=GS Q9FHG3/175-267      AC Q9FHG3
#=GS Q9FHG3/175-267      OS Arabidopsis thaliana
#=GS Q9FHG3/175-267      DE 16S rRNA processing protein RimM family
#=GS Q9FHG3/175-267      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9FHG3/175-267      DR GO; GO:0009507; 
#=GS A9TMN6/172-252      AC A9TMN6
#=GS A9TMN6/172-252      OS Physcomitrella patens
#=GS A9TMN6/172-252      DE Predicted protein
#=GS A9TMN6/172-252      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS D7TJY9/172-271      AC D7TJY9
#=GS D7TJY9/172-271      OS Vitis vinifera
#=GS D7TJY9/172-271      DE Uncharacterized protein
#=GS D7TJY9/172-271      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS I1HGC7/187-285      AC I1HGC7
#=GS I1HGC7/187-285      OS Brachypodium distachyon
#=GS I1HGC7/187-285      DE Uncharacterized protein
#=GS I1HGC7/187-285      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS I1K454/179-278      AC I1K454
#=GS I1K454/179-278      OS Glycine max
#=GS I1K454/179-278      DE Uncharacterized protein
#=GS I1K454/179-278      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A0D3D9H5/177-269  AC A0A0D3D9H5
#=GS A0A0D3D9H5/177-269  OS Brassica oleracea var. oleracea
#=GS A0A0D3D9H5/177-269  DE Uncharacterized protein
#=GS A0A0D3D9H5/177-269  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS V4L804/176-268      AC V4L804
#=GS V4L804/176-268      OS Eutrema salsugineum
#=GS V4L804/176-268      DE Uncharacterized protein
#=GS V4L804/176-268      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A087GNL5/172-264  AC A0A087GNL5
#=GS A0A087GNL5/172-264  OS Arabis alpina
#=GS A0A087GNL5/172-264  DE Uncharacterized protein
#=GS A0A087GNL5/172-264  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS A0A1J3CT20/195-288  AC A0A1J3CT20
#=GS A0A1J3CT20/195-288  OS Noccaea caerulescens
#=GS A0A1J3CT20/195-288  DE Ribosome maturation factor RimM
#=GS A0A1J3CT20/195-288  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS R0F023/175-267      AC R0F023
#=GS R0F023/175-267      OS Capsella rubella
#=GS R0F023/175-267      DE Uncharacterized protein
#=GS R0F023/175-267      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7MRX0/176-268      AC D7MRX0
#=GS D7MRX0/176-268      OS Arabidopsis lyrata subsp. lyrata
#=GS D7MRX0/176-268      DE 16S rRNA processing protein RimM family
#=GS D7MRX0/176-268      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A078H4C2/178-270  AC A0A078H4C2
#=GS A0A078H4C2/178-270  OS Brassica napus
#=GS A0A078H4C2/178-270  DE BnaA06g35980D protein
#=GS A0A078H4C2/178-270  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS M4E8B1/178-270      AC M4E8B1
#=GS M4E8B1/178-270      OS Brassica rapa subsp. pekinensis
#=GS M4E8B1/178-270      DE Uncharacterized protein
#=GS M4E8B1/178-270      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS V7CQH9/185-285      AC V7CQH9
#=GS V7CQH9/185-285      OS Phaseolus vulgaris
#=GS V7CQH9/185-285      DE Uncharacterized protein
#=GS V7CQH9/185-285      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus; Phaseolus vulgaris; 
#=GS A0A151UGW7/182-282  AC A0A151UGW7
#=GS A0A151UGW7/182-282  OS Cajanus cajan
#=GS A0A151UGW7/182-282  DE Ribosome maturation factor rimM
#=GS A0A151UGW7/182-282  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; 
#=GS A0A1S3UW01/179-279  AC A0A1S3UW01
#=GS A0A1S3UW01/179-279  OS Vigna radiata var. radiata
#=GS A0A1S3UW01/179-279  DE uncharacterized protein LOC106769157
#=GS A0A1S3UW01/179-279  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; 
#=GS A0A0L9TJU2/185-285  AC A0A0L9TJU2
#=GS A0A0L9TJU2/185-285  OS Vigna angularis
#=GS A0A0L9TJU2/185-285  DE Uncharacterized protein
#=GS A0A0L9TJU2/185-285  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; 
#=GS A0A0S3QYY8/185-285  AC A0A0S3QYY8
#=GS A0A0S3QYY8/185-285  OS Vigna angularis var. angularis
#=GS A0A0S3QYY8/185-285  DE Uncharacterized protein
#=GS A0A0S3QYY8/185-285  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; Vigna angularis var. angularis; 
#=GS A0A0Q3FZT8/187-285  AC A0A0Q3FZT8
#=GS A0A0Q3FZT8/187-285  OS Brachypodium distachyon
#=GS A0A0Q3FZT8/187-285  DE Uncharacterized protein
#=GS A0A0Q3FZT8/187-285  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A0Q3FZS6/187-285  AC A0A0Q3FZS6
#=GS A0A0Q3FZS6/187-285  OS Brachypodium distachyon
#=GS A0A0Q3FZS6/187-285  DE Uncharacterized protein
#=GS A0A0Q3FZS6/187-285  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A0R0K2B2/179-278  AC A0A0R0K2B2
#=GS A0A0R0K2B2/179-278  OS Glycine max
#=GS A0A0R0K2B2/179-278  DE Uncharacterized protein
#=GS A0A0R0K2B2/179-278  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS I1KSK3/174-274      AC I1KSK3
#=GS I1KSK3/174-274      OS Glycine max
#=GS I1KSK3/174-274      DE Uncharacterized protein
#=GS I1KSK3/174-274      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GF SQ 22
Q9FHG3/175-267              LDEGEFYSRDLVGMRVLLKETGQLVGTVANIFDNGGNDLLHVLLD-SSMEVCNGNAK--------TNQLVWIPFVDAIVPDVDLERKEMYITPPKGLLEVNM
A9TMN6/172-252              R-----------GWKVVLEETGEVVGRVEEVLNLCSFWDPSVVEY-CMLKVFDSNS---------PGIEYLIPWVEDIVKEVDCNAERIFIKPPEGLLELAK
D7TJY9/172-271              LEEGEFYSRDLLGMRVTLKETGEPVGTVVNVFSTGANDLLQVMLD-PSVKTPDHTGNPKS-ETGVSGPLVWVPFVEAIVPNVDMNKREMQITPPKGLLELNL
I1HGC7/187-285              MEEDEIYSRDLVGMSVIVKDTGKLVGTVAQVFNFGGGDLLQVMVG-SAESAVQPNSENQDSTP--SREHVWIPFAEDIVPDIDMESREMWITPPKGLLEINR
I1K454/179-278              LEEGEFYTHDLIGMRVFMKENGKLVGTVVNVFNSGANDLLQIVLD-SSFDMLDKSGKSRSAE-DASDQLVLVPFVEAIVPDVDMKKREMHITPPKGLLELNL
A0A0D3D9H5/177-269          LDEGEFYSRDLLGMRVLLKETGQLVGTVANVFDNGGNDLLHVLLD-SSMEVCNGSTK--------TNQLVWIPFVDAIVPDVDLERREMYITPPKGLLEVNM
V4L804/176-268              LDEGEFYTRDLVGMRVLLKETGQLVGTVANIFDNGGNDLLHVLLD-SSMEVCNGNAK--------TNQLVWIPFVDAIVPDVDLERKEMYITPPKGLLEVNM
A0A087GNL5/172-264          LDEGEFYTRDLVGMRVLLKETGQLVGTVANIFDNGGNDLLHVLLD-SSMEVCNGSAK--------TDQLVWIPFVGAIVPDVDLERKEMYITPPKGLLEVNM
A0A1J3CT20/195-288          LDEGEFYSRDLIGMRVLLKETGQLVGTVDNVFDNGGNDLLHVLLDSSSMEVCNGNPK--------TNQLVWIPFVDAIVPDVDLERKEMYITPPKGLLEVNM
R0F023/175-267              LDEGEFYSRDLVGMRVLLKETGQLVGTVANIFDNGGNDLLHVMLD-PSLEVCNGSAK--------TNQLVWIPFVDAIVPDVDLERKEMYITPPKGLLEVNM
D7MRX0/176-268              LDDDEFYSRDLVGMKVLLKETGQLVGTVANIFDNGGNDLLHVLLD-SSMEVCNGSAK--------TNQLVWIPFVDAIVPDVDLERKEMYITPPKGLLEVNM
A0A078H4C2/178-270          LDDGEFYSRDLLGMRVLLKETGQLVGTVANVFDNGGNDLLHVLLD-SSMEACNGSTK--------TNQLVWIPFVDAIVPDVDLERREMYITPPKGLLEVNM
M4E8B1/178-270              LDDGEFYSRDLLGMRVLLKETGQLVGTVANVFDNGGNDLLHVLLD-SSMEACNGSAK--------TNQLVWIPFVDAIVPDVDLERREMYITPPKGLLEVNM
V7CQH9/185-285              LEEGEFYTHDLIGMRVFMKENGTLVGTIVNVFNSGANDLLQIVLD-SSFDMLDKSGKSKSAGTDVSGQLVLVPFVEAIVPDVDMKRREMHITPPKGLLEINL
A0A151UGW7/182-282          LEEGEFYTHDLIGMRVFMKENGKLVGTVVNVFNSGANDLLQIVLD-SSFDMLDKSGKSRSTEIDASSQLVLVPFVEAIVPDVDMKRREMHITPPKGLLEVNL
A0A1S3UW01/179-279          LEEGEFYTHDLIGMKVFMKENGTLVGTVVNVFNSGANDLLQIALD-SSFDMLDKSGKSKSAGTDVSGQLVLVPFVEAIVPDVDMKRREMHITPPKGLLELNL
A0A0L9TJU2/185-285          LEEGEFYTHDLIGMKVFMKENGTLVGTVINVFNSGANDLLQIALD-SSFDMLDKSGKSKSAGTDVSYQLVLVPFVEAIVPDVDMKRREMHITPPKGLLELNL
A0A0S3QYY8/185-285          LEEGEFYTHDLIGMKVFMKENGTLVGTVINVFNSGANDLLQIALD-SSFDMLDKSGKSKSAGTDVSYQLVLVPFVEAIVPDVDMKRREMHITPPKGLLELNL
A0A0Q3FZT8/187-285          MEEDEIYSRDLVGMSVIVKDTGKLVGTVAQVFNFGGGDLLQVMVG-SAESAVQPNSENQDSTP--SREHVWIPFAEDIVPDIDMESREMWITPPKGLLEINR
A0A0Q3FZS6/187-285          MEEDEIYSRDLVGMSVIVKDTGKLVGTVAQVFNFGGGDLLQVMVG-SAESAVQPNSENQDSTP--SREHVWIPFAEDIVPDIDMESREMWITPPKGLLEINR
A0A0R0K2B2/179-278          LEEGEFYTHDLIGMRVFMKENGKLVGTVVNVFNSGANDLLQIVLD-SSFDMLDKSGKSRSAE-DASDQLVLVPFVEAIVPDVDMKKREMHITPPKGLLELNL
I1KSK3/174-274              LEEGEFYTHDLIGMKVFMKENGKLVGTVMNVFNSGANDLLQIVLD-SSFDMLDKSGKSRSAEIDASDQLVLVPFVEAIVPDVDMKRRQMHITPPKGLLELNL
#=GC scorecons              656575745774975946776947997846786375577767566076344354545111111105355757977769977795556784979979999574
#=GC scorecons_70           *_*_*_*__**_**_*__****_*****_****_*__***_*____*______________________*_*****_******___***_*********_*_
#=GC scorecons_80           ____*_*__**_**_*__**_*_*****__**__*__***_*___________________________*_****__******____**_*********_*_
#=GC scorecons_90           ____________*__*_____*__**_*____________________________________________*____**___*_____*_*_**_****___
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