# STOCKHOLM 1.0
#=GF ID 1.20.190.40/FF/000002
#=GF DE Major DNA-binding protein
#=GF AC 1.20.190.40/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 70.996
#=GS P04296/547-691      AC P04296
#=GS P04296/547-691      OS Human alphaherpesvirus 1 strain 17
#=GS P04296/547-691      DE Major DNA-binding protein
#=GS P04296/547-691      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS P04296/547-691      DR GO; GO:0003677; GO:0039686; GO:0039715; GO:0042025; 
#=GS P09246/545-715      AC P09246
#=GS P09246/545-715      OS Human herpesvirus 3 strain Dumas
#=GS P09246/545-715      DE Major DNA-binding protein
#=GS P09246/545-715      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Human alphaherpesvirus 3; 
#=GS P09246/545-715      DR GO; GO:0003677; GO:0039686; GO:0042025; 
#=GS O92611/543-672      AC O92611
#=GS O92611/543-672      OS Suid alphaherpesvirus 1
#=GS O92611/543-672      DE Major DNA-binding protein
#=GS O92611/543-672      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Suid alphaherpesvirus 1; 
#=GS O92611/543-672      DR GO; GO:0003677; GO:0005515; GO:1902800; 
#=GS P17470/547-691      AC P17470
#=GS P17470/547-691      OS Human alphaherpesvirus 1 strain KOS
#=GS P17470/547-691      DE Major DNA-binding protein
#=GS P17470/547-691      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS P17470/547-691      DR GO; GO:0010792; 
#=GS Q4JQU6/545-715      AC Q4JQU6
#=GS Q4JQU6/545-715      OS Human herpesvirus 3 strain Oka vaccine
#=GS Q4JQU6/545-715      DE Major DNA-binding protein
#=GS Q4JQU6/545-715      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Human alphaherpesvirus 3; 
#=GS Q4JQU6/545-715      DR GO; GO:0039715; 
#=GS Q77CC7/550-685      AC Q77CC7
#=GS Q77CC7/550-685      OS Bovine herpesvirus type 1.1
#=GS Q77CC7/550-685      DE Major DNA-binding protein
#=GS Q77CC7/550-685      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Bovine alphaherpesvirus 1; 
#=GS Q77CC7/550-685      DR GO; GO:0016032; 
#=GS P36384/547-693      AC P36384
#=GS P36384/547-693      OS Human alphaherpesvirus 2
#=GS P36384/547-693      DE Major DNA-binding protein
#=GS P36384/547-693      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 2; 
#=GS P89452/547-693      AC P89452
#=GS P89452/547-693      OS Human herpesvirus 2 strain HG52
#=GS P89452/547-693      DE Major DNA-binding protein
#=GS P89452/547-693      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 2; 
#=GS H9E936/547-691      AC H9E936
#=GS H9E936/547-691      OS Human alphaherpesvirus 1
#=GS H9E936/547-691      DE Major DNA-binding protein
#=GS H9E936/547-691      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS P17469/547-691      AC P17469
#=GS P17469/547-691      OS Human alphaherpesvirus 1 strain F
#=GS P17469/547-691      DE Major DNA-binding protein
#=GS P17469/547-691      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS L0N3D0/547-691      AC L0N3D0
#=GS L0N3D0/547-691      OS Human alphaherpesvirus 1 strain RH2
#=GS L0N3D0/547-691      DE Major DNA-binding protein
#=GS L0N3D0/547-691      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS D3YP93/547-691      AC D3YP93
#=GS D3YP93/547-691      OS Human alphaherpesvirus 1
#=GS D3YP93/547-691      DE Major DNA-binding protein
#=GS D3YP93/547-691      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS A0A0Y0R764/633-779  AC A0A0Y0R764
#=GS A0A0Y0R764/633-779  OS Human alphaherpesvirus 2
#=GS A0A0Y0R764/633-779  DE Major DNA-binding protein
#=GS A0A0Y0R764/633-779  DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 2; 
#=GS A0A109R1L2/173-319  AC A0A109R1L2
#=GS A0A109R1L2/173-319  OS Human alphaherpesvirus 2
#=GS A0A109R1L2/173-319  DE Major DNA-binding protein
#=GS A0A109R1L2/173-319  DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 2; 
#=GS G0ZLD0/545-715      AC G0ZLD0
#=GS G0ZLD0/545-715      OS Human alphaherpesvirus 3
#=GS G0ZLD0/545-715      DE Major DNA-binding protein
#=GS G0ZLD0/545-715      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Human alphaherpesvirus 3; 
#=GS Q6QCM6/545-715      AC Q6QCM6
#=GS Q6QCM6/545-715      OS Human alphaherpesvirus 3
#=GS Q6QCM6/545-715      DE Major DNA-binding protein
#=GS Q6QCM6/545-715      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Human alphaherpesvirus 3; 
#=GS A0A0U2URL4/550-685  AC A0A0U2URL4
#=GS A0A0U2URL4/550-685  OS Bovine alphaherpesvirus 1
#=GS A0A0U2URL4/550-685  DE Major DNA-binding protein
#=GS A0A0U2URL4/550-685  DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Bovine alphaherpesvirus 1; 
#=GS A0A089N8B4/550-685  AC A0A089N8B4
#=GS A0A089N8B4/550-685  OS Bovine herpesvirus type 1.2 strain SM023
#=GS A0A089N8B4/550-685  DE Major DNA-binding protein
#=GS A0A089N8B4/550-685  DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Bovine alphaherpesvirus 1; 
#=GS Q89549/550-685      AC Q89549
#=GS Q89549/550-685      OS Bovine alphaherpesvirus 1
#=GS Q89549/550-685      DE Major DNA-binding protein
#=GS Q89549/550-685      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Bovine alphaherpesvirus 1; 
#=GS P11870/543-672      AC P11870
#=GS P11870/543-672      OS Suid herpesvirus 1 (strain Indiana-Funkhauser / Becker)
#=GS P11870/543-672      DE Major DNA-binding protein
#=GS P11870/543-672      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Suid alphaherpesvirus 1; 
#=GS A0A182BM29/524-653  AC A0A182BM29
#=GS A0A182BM29/524-653  OS Suid alphaherpesvirus 1
#=GS A0A182BM29/524-653  DE Major DNA-binding protein
#=GS A0A182BM29/524-653  DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Suid alphaherpesvirus 1; 
#=GF SQ 21
P04296/547-691              DVLGNYAAFSALKRADG-SETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHG-------------------------
P09246/545-715              DPLGNYAPYLILRKPGDQTEAAKATMQDTYRATLERLFIDLEQERLLDRGAPCSSEGLSSVIVDHPTFRRILDTLRARIEQTTTQFMKVLVETRDYKIREGLSEATHSMALTFDPYSGAFCPITNFLVKRTHLAVVQDLALSQCHCVFYGQQVEGRNFRNQFQPVLRRRFV
O92611/543-672              DVLGNYASYGALKRPND-SEPPKAIMQDTYRAAVDRLLADVAGAR------------IGETVTDHAGFRHALRALRDTVEQAADRFVRTLVETRDFKLRDALYDANHTMSLSLDPYSGALCPATSFLARRTLLAVLQDLALSQ----------------------------
P17470/547-691              DVLGNYAAFSALKRADG-SETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHG-------------------------
Q4JQU6/545-715              DPLGNYAPYLILRKPGDQTEAAKATMQDTYRATLERLFIDLEQERLLDRGAPCSSEGLSSVIVDHPTFRRILDTLRARIEQTTTQFMKVLVETRDYKIREGLSEATHSMALTFDPYSGAFCPITNFLVKRTHLAVVQDLALSQCHCVFYGQQVEGRNFRNQFQPVLRRRFV
Q77CC7/550-685              DVLGNYASYSALRRPGA-DENARSIMQATYRAAVENVLAELDQQRLLAHDAQSAAQ-LERAITDHASFRGALAAIQNTVEQATEAFVRGLVEDRDFKMREALYEANHTLSLALDPYSTAVCPATAFLFRRSVLAVVQD---------------------------------
P36384/547-693              DVLGNYAAFSALKRADG-SENTRTIMQETYRAATERVMAELEALQYVDQAVPTALGRLETIIGNREALHTVVNNIKQLVDREVEQLMRNLIEGRNFKFRDGLAEANHAMSLSLDPYTCGPCPLLQLLARRSNLAVYQDLALSQCHGVF-----------------------
P89452/547-693              DVLGNYAAFSALKRADG-SENTRTIMQETYRAATERVMAELEALQYVDQAVPTALGRLETIIGNREALHTVVNNIKQLVDREVEQLMRNLIEGRNFKFRDGLAEANHAMSLSLDPYTCGPCPLLQLLARRSNLAVYQDLALSQCHGVF-----------------------
H9E936/547-691              DVLGNYAAFSALKRADG-SETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHG-------------------------
P17469/547-691              DVLGNYAAFSALKRADG-SETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHG-------------------------
L0N3D0/547-691              DVLGNYAAFSALKRADG-SETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHG-------------------------
D3YP93/547-691              DVLGNYAAFSALKRADG-SETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHG-------------------------
A0A0Y0R764/633-779          DVLGNYAAFSALKRADG-SENTRTIMQETYRAATERVMAELEALQYVDQAVPTALGRLETIIGNREALHTVVNNIKQLVDREVEQLMRNLIEGRNFKFRDGLAEANHAMSLSLDPYTCGPCPLLQLLARRSNLAVYQDLALSQCHGVF-----------------------
A0A109R1L2/173-319          DVLGNYAAFSALKRADG-SENTRTIMQETYRAATERVMAELEALQYVDQAVPTALGRLETIIGNREALHTVVNNIKQLVDREVEQLMRNLIEGRNFKFRDGLAEANHAMSLSLDPYTCGPCPLLQLLARRSNLAVYQDLALSQCHGVF-----------------------
G0ZLD0/545-715              DPLGNYAPYLILRKPGDQTEAAKATMQDTYRATLERLFIDLEQERLLDRGAPCSSEGLSSVIVDHPTFRRILDTLRARIEQTTTQFMKVLVETRDYKIREGLSEATHSMALTFDPYSGAFCPITNFLVKRTHLAVVQDLALSQCHCVFYGQQVEGRNFRNQFQPVLRRRFV
Q6QCM6/545-715              DPLGNYAPYLILRKPGDQTEAAKATMQDTYRATLERLFIDLEQERLLDRGAPCSSEGLSSVIVDHPTFRRILDTLRARIEQTTTQFMKVLVETRDYKIREGLSEATHSMALTFDPYSGAFCPITNFLVKRTHLAVVQDLALSQCHCVFYGQQVEGRNFRNQFQPVLRRRFV
A0A0U2URL4/550-685          DVLGNYASYSALRRPGA-DENARSIMQATYRAAVENVLAELDQQRLLAHDAQSAAQ-LERAITDHASFRGALAAIQNTVEQATEAFVRGLVEDRDFKMREALYEANHTLSLALDPYSTAVCPATAFLFRRSVLAVVQD---------------------------------
A0A089N8B4/550-685          DVLGNYASYSALRRPGA-DENARSIMQATYRAAVENVLAELDQQRLLAHDAQSAAQ-LERAITDHASFRGALAAIQNTVEQATEAFVRGLVEDRDFKMREALYEANHTLSLALDPYSTAVCPATAFLFRRSVLAVVQD---------------------------------
Q89549/550-685              DVLGNYASYSALRRPGA-DENARSIMQATYRAAVENVLAELDQQRLLAHDAQSAAQ-LERAITDHASFRGALAAIQNTVEQATEAFVRGLVEDRDFKMREALYEANHTLSLALDPYSTAVCPATAFLFRRSVLAVVQD---------------------------------
P11870/543-672              DVLGNYASYGALKRPND-SEPPKAIMQDTYRAAVDRLLADVAGAR------------IGETVTDHAGFRHALRALRDTVEQAADRFVRTLVETRDFKLRDALYDANHTMSLSLDPYSGALCPATSFLARRTLLAVLQDLALSQ----------------------------
A0A182BM29/524-653          DVLGNYASYGALKRPND-SEPPKAIMQDTYRAAVDRLLADVAGAR------------IGETVTDHAGFRHALRALRDTVEQAADRFVRTLVETRDFKLRDALYDANHTMSLSLDPYSGALCPATSFLARRTLLAVLQDLALSQ----------------------------
#=GC scorecons              969999957469776550594675699599997476656776436344434434232754575664466456455643776455566749894967959769379695769579995464994546937963999499555553321100000000000000000000000
#=GC scorecons_70           *******_*_*****____*_**_***_*****_***_***___*____________*___*_**__**__*___*__***____***_***_****_****_****_***_****__*_**___**_**__***_**_________________________________
#=GC scorecons_80           *_*****_*__*_*_____*_____**_****__*_____*________________*___*________________**_______*_***_*_**_*__*_**_*_*_*__***____**____*_**__***_**_________________________________
#=GC scorecons_90           *_*****____*_______*_____**_****_________________________________________________________*_*_*__*_*__*__*_*___*__***____**____*__*__***_**_________________________________
//