# STOCKHOLM 1.0
#=GF ID 1.20.190.40/FF/000001
#=GF DE Major DNA-binding protein
#=GF AC 1.20.190.40/FF/000001
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 56.091
#=GS P04296/780-911      AC P04296
#=GS P04296/780-911      OS Human alphaherpesvirus 1 strain 17
#=GS P04296/780-911      DE Major DNA-binding protein
#=GS P04296/780-911      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS P04296/780-911      DR GO; GO:0003677; GO:0039686; GO:0039715; GO:0042025; 
#=GS P09246/776-909      AC P09246
#=GS P09246/776-909      OS Human herpesvirus 3 strain Dumas
#=GS P09246/776-909      DE Major DNA-binding protein
#=GS P09246/776-909      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Human alphaherpesvirus 3; 
#=GS P09246/776-909      DR GO; GO:0003677; GO:0039686; GO:0042025; 
#=GS O92611/769-893      AC O92611
#=GS O92611/769-893      OS Suid alphaherpesvirus 1
#=GS O92611/769-893      DE Major DNA-binding protein
#=GS O92611/769-893      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Suid alphaherpesvirus 1; 
#=GS O92611/769-893      DR GO; GO:0003677; GO:0005515; GO:1902800; 
#=GS Q4JQU6/776-909      AC Q4JQU6
#=GS Q4JQU6/776-909      OS Human herpesvirus 3 strain Oka vaccine
#=GS Q4JQU6/776-909      DE Major DNA-binding protein
#=GS Q4JQU6/776-909      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Human alphaherpesvirus 3; 
#=GS Q4JQU6/776-909      DR GO; GO:0039715; 
#=GS P17470/780-911      AC P17470
#=GS P17470/780-911      OS Human alphaherpesvirus 1 strain KOS
#=GS P17470/780-911      DE Major DNA-binding protein
#=GS P17470/780-911      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS P17470/780-911      DR GO; GO:0010792; 
#=GS Q77CC7/756-913      AC Q77CC7
#=GS Q77CC7/756-913      OS Bovine herpesvirus type 1.1
#=GS Q77CC7/756-913      DE Major DNA-binding protein
#=GS Q77CC7/756-913      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Bovine alphaherpesvirus 1; 
#=GS Q77CC7/756-913      DR GO; GO:0016032; 
#=GS P36384/780-911      AC P36384
#=GS P36384/780-911      OS Human alphaherpesvirus 2
#=GS P36384/780-911      DE Major DNA-binding protein
#=GS P36384/780-911      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 2; 
#=GS G0ZLD0/776-909      AC G0ZLD0
#=GS G0ZLD0/776-909      OS Human alphaherpesvirus 3
#=GS G0ZLD0/776-909      DE Major DNA-binding protein
#=GS G0ZLD0/776-909      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Human alphaherpesvirus 3; 
#=GS Q6QCM6/776-909      AC Q6QCM6
#=GS Q6QCM6/776-909      OS Human alphaherpesvirus 3
#=GS Q6QCM6/776-909      DE Major DNA-binding protein
#=GS Q6QCM6/776-909      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Human alphaherpesvirus 3; 
#=GS P89452/780-911      AC P89452
#=GS P89452/780-911      OS Human herpesvirus 2 strain HG52
#=GS P89452/780-911      DE Major DNA-binding protein
#=GS P89452/780-911      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 2; 
#=GS H9E936/780-911      AC H9E936
#=GS H9E936/780-911      OS Human alphaherpesvirus 1
#=GS H9E936/780-911      DE Major DNA-binding protein
#=GS H9E936/780-911      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS P17469/780-911      AC P17469
#=GS P17469/780-911      OS Human alphaherpesvirus 1 strain F
#=GS P17469/780-911      DE Major DNA-binding protein
#=GS P17469/780-911      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS L0N3D0/780-911      AC L0N3D0
#=GS L0N3D0/780-911      OS Human alphaherpesvirus 1 strain RH2
#=GS L0N3D0/780-911      DE Major DNA-binding protein
#=GS L0N3D0/780-911      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS D3YP93/780-911      AC D3YP93
#=GS D3YP93/780-911      OS Human alphaherpesvirus 1
#=GS D3YP93/780-911      DE Major DNA-binding protein
#=GS D3YP93/780-911      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 1; 
#=GS A0A0Y0R764/866-997  AC A0A0Y0R764
#=GS A0A0Y0R764/866-997  OS Human alphaherpesvirus 2
#=GS A0A0Y0R764/866-997  DE Major DNA-binding protein
#=GS A0A0Y0R764/866-997  DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 2; 
#=GS A0A109R1L2/405-537  AC A0A109R1L2
#=GS A0A109R1L2/405-537  OS Human alphaherpesvirus 2
#=GS A0A109R1L2/405-537  DE Major DNA-binding protein
#=GS A0A109R1L2/405-537  DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus; Human alphaherpesvirus 2; 
#=GS A0A0U2URL4/756-913  AC A0A0U2URL4
#=GS A0A0U2URL4/756-913  OS Bovine alphaherpesvirus 1
#=GS A0A0U2URL4/756-913  DE Major DNA-binding protein
#=GS A0A0U2URL4/756-913  DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Bovine alphaherpesvirus 1; 
#=GS A0A089N8B4/756-913  AC A0A089N8B4
#=GS A0A089N8B4/756-913  OS Bovine herpesvirus type 1.2 strain SM023
#=GS A0A089N8B4/756-913  DE Major DNA-binding protein
#=GS A0A089N8B4/756-913  DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Bovine alphaherpesvirus 1; 
#=GS Q89549/756-913      AC Q89549
#=GS Q89549/756-913      OS Bovine alphaherpesvirus 1
#=GS Q89549/756-913      DE Major DNA-binding protein
#=GS Q89549/756-913      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Bovine alphaherpesvirus 1; 
#=GS P11870/769-893      AC P11870
#=GS P11870/769-893      OS Suid herpesvirus 1 (strain Indiana-Funkhauser / Becker)
#=GS P11870/769-893      DE Major DNA-binding protein
#=GS P11870/769-893      DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Suid alphaherpesvirus 1; 
#=GS A0A182BM29/750-874  AC A0A182BM29
#=GS A0A182BM29/750-874  OS Suid alphaherpesvirus 1
#=GS A0A182BM29/750-874  DE Major DNA-binding protein
#=GS A0A182BM29/750-874  DR ORG; Viruses; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus; Suid alphaherpesvirus 1; 
#=GF SQ 21
P04296/780-911              -------------------------AGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFI
P09246/776-909              -----------------------VFSGNCTNLSEAARARLVGLASAYQRQEK-RVDMLHGALGFLLKQFHGLLFPRGMPPNSKSPNPQWFWTLLQRNQMPADKLTHEEITTIAAVKRFTEEYAAINFINLPPTCIGELAQFYMANLILKYCDHSQYLI
O92611/769-893              --------------------------------SDAARARVAGLAGAYQRPDT-AVDVLNGPLGFLLKQHHATLFPRGKPPGGQSPNPQWFWTLLQRNQLPARLLTKDDIETIAAVKRFSVDYGAINYVNLTPGTVAELAQFYLANLILRYCDHKQFFI
Q4JQU6/776-909              -----------------------VFSGNCTNLSEAARARLVGLASAYQRQEK-RVDMLHGALGFLLKQFHGLLFPRGMPPNSKSPNPQWFWTLLQRNQMPADKLTHEEITTIAAVKRFTEEYAALNFINLPPTCIGELAQFYMANLILKYCDHSQYLI
P17470/780-911              -------------------------AGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFI
Q77CC7/756-913              DMDGDISKVSLEVFKEMRVKNRVMFSAGNANMSEAARARVLGLAGAYQKPESGGVNILSGPLGFLVKQFHRKLFPNGKPPGSPTPNPQWFWTLLQRNQMPARLLSKEDIETIGAVKRFSDAYAAINYVNLTPGNVAELAQFYMANLVLRHCDHKQFYI
P36384/780-911              -------------------------AGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAVIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKRFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFI
G0ZLD0/776-909              -----------------------VFSGNCTNLSEAARARLVGLASAYQRQEK-RVDMLHGALGFLLKQFHGLLFPRGMPPNSKSPNPQWFWTLLQRNQMPADKLTHEEITTIAAVKRFTEEYAALNFINLPPTCIGELAQFYMANLILKYCDHSQYLI
Q6QCM6/776-909              -----------------------VFSGNCTNLSEAARARLVGLASAYQRQEK-RVDMLHGALGFLLKQFHGLLFPRGMPPNSKSPNPQWFWTLLQRNQMPADKLTHEEITTIAAVKRFTEEYAAINFINLPPTCIGELAQFYMANLILKYCDHSQYLI
P89452/780-911              -------------------------AGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAVIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKRFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFI
H9E936/780-911              -------------------------AGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFI
P17469/780-911              -------------------------AGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFI
L0N3D0/780-911              -------------------------AGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFI
D3YP93/780-911              -------------------------AGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFI
A0A0Y0R764/866-997          -------------------------AGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAVIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKRFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFI
A0A109R1L2/405-537          ------------------------FAGASANASEAAKARVASLQSAYQKPDK-RVDILLGPLGFLLKQFHAVIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKRFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFI
A0A0U2URL4/756-913          DMDGDISKVSLEVFKEMRVKNRVMFSAGNANMSEAARARVLGLAGAYQKPESGGVNILSGPLGFLVKQFHRKLFPNGKPPGSPTPNPQWFWTLLQRNQMPARLLSKEDIETIGAVKRFSDAYAAINYVNLTPGNVAELAQFYMANLVLRHCDHKQFYI
A0A089N8B4/756-913          DMDGDISKVSLEVFKEMRVKNRVMFSAGNANMSEAARARVLGLAGAYQKPESGGVNILSGPLGFLVKQFHRKLFPNGKPPGSPTPNPQWFWTLLQRNQMPARLLSKEDIETIGAVKRFSDAYAAINYVNLTPGNVAELAQFYMANLVLRHCDHKQFYI
Q89549/756-913              DMDGDISKVSLEVFKEMRVKNRVMFSAGNANMSEAARARVLGLAGAYQKPESGGVNILSGPLGFLVKQFHRKLFPNGKPPGSPTPNPQWFWTLLQRNQMPARLLSKEDIETIGAVKRFSDAYAAINYVNLTPGNVAELAQFYMANLVLRHCDHKQFYI
P11870/769-893              --------------------------------SDAARARVAGLAGAYQRPDT-AVDVLNGPLGFLLKQHHATLFPRGKPPGGQSPNPQWFWTLLQRNQLPARLLTKDDIETIAAVKRFSVDYGAINYVNLTPGTVAELAQFYLANLILRYCDHKQFFI
A0A182BM29/750-874          --------------------------------SDAARARVAGLAGAYQRPDT-AVDVLNGPLGFLLKQHHATLFPRGKPPGGQSPNPQWFWTLLQRNQLPARLLTKDDIETIAAVKRFSVDYGAINYVNLTPGTVAELAQFYLANLILRYCDHKQFFI
#=GC scorecons              00000000000000000000000124433463979979975695699976750597693979999799795369969699674499999999599999699669667796996579797359698977995955759995797995797799955769
#=GC scorecons_70           ______________________________*_********_**__******___****_***********__***_******__********_*********_**_*******_*****__*_*******_*__*_***_*****_*******__*_*
#=GC scorecons_80           ________________________________********__*__****_____*__*_*_****_****___**_*_**_*__********_*****_**__*__***_**__****___*_****_**_*__*_***_*****_*******__*_*
#=GC scorecons_90           ________________________________*_**_**___*__***______*__*_*_****_**_*___**_*_**____********_*****_**__*____*_**___*_*___*_*_*__**_*____***__*_**__*__***____*
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