# STOCKHOLM 1.0
#=GF ID 1.20.1310.20/FF/000019
#=GF DE Erythrocyte membrane protein 1, PfEMP1
#=GF AC 1.20.1310.20/FF/000019
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 75.679
#=GS Q8I521/1309-1526_1561-1596           AC Q8I521
#=GS Q8I521/1309-1526_1561-1596           OS Plasmodium falciparum 3D7
#=GS Q8I521/1309-1526_1561-1596           DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8I521/1309-1526_1561-1596           DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8I521/1309-1526_1561-1596           DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0046789; GO:0050839; GO:0098609; 
#=GS Q8I098/2254-2332_2387-2545           AC Q8I098
#=GS Q8I098/2254-2332_2387-2545           OS Plasmodium falciparum 3D7
#=GS Q8I098/2254-2332_2387-2545           DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8I098/2254-2332_2387-2545           DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8I098/2254-2332_2387-2545           DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8IAK3/1718-1962                     AC Q8IAK3
#=GS Q8IAK3/1718-1962                     OS Plasmodium falciparum 3D7
#=GS Q8IAK3/1718-1962                     DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IAK3/1718-1962                     DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IAK3/1718-1962                     DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS Q8IAS7/802-832_863-889_920-1095      AC Q8IAS7
#=GS Q8IAS7/802-832_863-889_920-1095      OS Plasmodium falciparum 3D7
#=GS Q8IAS7/802-832_863-889_920-1095      DE Erythrocyte membrane protein 1, PfEMP1
#=GS Q8IAS7/802-832_863-889_920-1095      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IAS7/802-832_863-889_920-1095      DR GO; GO:0020002; GO:0020013; GO:0020030; GO:0020033; GO:0020035; GO:0050839; GO:0098609; 
#=GS A0A2I0BZF5/2254-2332_2387-2545       AC A0A2I0BZF5
#=GS A0A2I0BZF5/2254-2332_2387-2545       OS Plasmodium falciparum NF54
#=GS A0A2I0BZF5/2254-2332_2387-2545       DE Erythrocyte membrane protein 1
#=GS A0A2I0BZF5/2254-2332_2387-2545       DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JV00/2254-2332_2387-2545           AC W7JV00
#=GS W7JV00/2254-2332_2387-2545           OS Plasmodium falciparum NF54
#=GS W7JV00/2254-2332_2387-2545           DE Uncharacterized protein
#=GS W7JV00/2254-2332_2387-2545           DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BX13/1718-1962                 AC A0A2I0BX13
#=GS A0A2I0BX13/1718-1962                 OS Plasmodium falciparum NF54
#=GS A0A2I0BX13/1718-1962                 DE Erythrocyte membrane protein 1
#=GS A0A2I0BX13/1718-1962                 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BXD4/802-832_863-889_920-1095  AC A0A2I0BXD4
#=GS A0A2I0BXD4/802-832_863-889_920-1095  OS Plasmodium falciparum NF54
#=GS A0A2I0BXD4/802-832_863-889_920-1095  DE Erythrocyte membrane protein 1
#=GS A0A2I0BXD4/802-832_863-889_920-1095  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JWX7/802-832_863-889_920-1095      AC W7JWX7
#=GS W7JWX7/802-832_863-889_920-1095      OS Plasmodium falciparum NF54
#=GS W7JWX7/802-832_863-889_920-1095      DE Uncharacterized protein
#=GS W7JWX7/802-832_863-889_920-1095      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BZ82/1309-1526_1561-1596       AC A0A2I0BZ82
#=GS A0A2I0BZ82/1309-1526_1561-1596       OS Plasmodium falciparum NF54
#=GS A0A2I0BZ82/1309-1526_1561-1596       DE Erythrocyte membrane protein 1
#=GS A0A2I0BZ82/1309-1526_1561-1596       DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7K1T7/692-909_944-980               AC W7K1T7
#=GS W7K1T7/692-909_944-980               OS Plasmodium falciparum NF54
#=GS W7K1T7/692-909_944-980               DE Uncharacterized protein
#=GS W7K1T7/692-909_944-980               DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 11
Q8I521/1309-1526_1561-1596                   --------GNLTQACKQKYG-PKAPTGWKCVPS-GDSTTTGEARARRVARSAEPRGSEPTSDKGSICVPPRRRKLYLGGFKRLTDGTAVSSETTSATSSHASNGDALLTAFVESASVETFFAWHKYKMEKKQPAQEGAG-LGLSLLEQEVSPEDDPEKQLQTGTIPPDFLRLMFYTLGDYRDILDGKNMEVVNLLKDGSPSDKEMYTRENKINQAIDNHFSKNENQA-----------TTPKTWWQKNGEHIWNGMICALTY-EDNGAKGTSNALQQ-------
Q8I098/2254-2332_2387-2545                   ---------SLNAACALKYGKNNSRLGWKCIPTSGDKTDTSENGAPRRARSA--HGGKSDSEKGSICVPPRRRRLYIKKIVDWA-ESQ-------------SKT------FVKSAAIETFFAWHKYKVDKEIEEKEKQA-AQNHLVQRKTS--ENPQKKLEGGEIPEDFKRQMFYTLGDYRDILVGDKTMIEALEKSGDTKIEDISEK-------IPKILDGENNKAAGGGPKQPNSGKTPQEWWKENAKHIWHGMICALTYNTDSNGKDKK--IQQVKAT---
Q8IAK3/1718-1962                             IVSKILTKDALQDACKLKYN--GKYYGWKCIS--GATT-------------------------GGLCIPPRRRKLYVTPLTKWA-TTAVSSEATPAPSQ--SESDKLREAFIQSAAIETFFLWHKYKQEKKPPSEQNAG-AALVLL-QGVTPQEDPQNKLKSGTIPEEFKRQMFYTLGDYADIFFGKNDILIGKTGTGSAKD-EMADKESKIKEAIKKFFQNGDSQPLSGKPVT-QSSDKRTALWGDFAQDIWHGMICALTY-TDSGEKGEL--PKEDDKVKDK
Q8IAS7/802-832_863-889_920-1095              TVAEALTKGDLNAACTLKYGTPNRYWGWKCIPT------------------------------GSICIPPRRRRLYIQKLHEWA-SRG-------------GQSDKLRTAFIQSAAIETFFLWHKYKAENTKTQSVGSPLLLLPQLPRSGSDDKDPETSLKSGTIPIDFLRLMFYTIADYKDIFEGKNMEVVNLLKDGSPSDKEMQERESKIKDAIDKVFPNSDNKKHSGVPSQ-TGNTTPQTLWSKYAEPIWNGMICALTY-RDSEEKGGT--PTQNNTVK--
A0A2I0BZF5/2254-2332_2387-2545               ---------SLNAACALKYGKNNSRLGWKCIPTSGDKTDTSENGAPRRARSA--HGGKSDSEKGSICVPPRRRRLYIKKIVDWA-ESQ-------------SKT------FVKSAAIETFFAWHKYKVDKEIEEKEKQA-AQNHLVQRKTS--ENPQKKLEGGEIPEDFKRQMFYTLGDYRDILVGDKTMIEALEKSGDTKIEDISEK-------IPKILDGENNKAAGGGPKQPNSGKTPQEWWKENAKHIWHGMICALTYNTDSNGKDKK--IQQVKAT---
W7JV00/2254-2332_2387-2545                   ---------SLNAACALKYGKNNSRLGWKCIPTSGDKTDTSENGAPRRARSA--HGGKSDSEKGSICVPPRRRRLYIKKIVDWA-ESQ-------------SKT------FVKSAAIETFFAWHKYKVDKEIEEKEKQA-AQNHLVQRKTS--ENPQKKLEGGEIPEDFKRQMFYTLGDYRDILVGDKTMIEALEKSGDTKIEDISEK-------IPKILDGENNKAAGGGPKQPNSGKTPQEWWKENAKHIWHGMICALTYNTDSNGKDKK--IQQVKAT---
A0A2I0BX13/1718-1962                         IVSKILTKDALQDACKLKYN--GKYYGWKCIS--GATT-------------------------GGLCIPPRRRKLYVTPLTKWA-TTAVSSEATPAPSQ--SESDKLREAFIQSAAIETFFLWHKYKQEKKPPSEQNAG-AALVLL-QGVTPQEDPQNKLKSGTIPEEFKRQMFYTLGDYADIFFGKNDILIGKTGTGSAKD-EMADKESKIKEAIKKFFQNGDSQPLSGKPVT-QSSDKRTALWGDFAQDIWHGMICALTY-TDSGEKGEL--PKEDDKVKDK
A0A2I0BXD4/802-832_863-889_920-1095          TVAEALTKGDLNAACTLKYGTPNRYWGWKCIPT------------------------------GSICIPPRRRRLYIQKLHEWA-SRG-------------GQSDKLRTAFIQSAAIETFFLWHKYKAENTKTQSVGSPLLLLPQLPRSGSDDKDPETSLKSGTIPIDFLRLMFYTIADYKDIFEGKNMEVVNLLKDGSPSDKEMQERESKIKDAIDKVFPNSDNKKHSGVPSQ-TGNTTPQTLWSKYAEPIWNGMICALTY-RDSEEKGGT--PTQNNTVK--
W7JWX7/802-832_863-889_920-1095              TVAEALTKGDLNAACTLKYGTPNRYWGWKCIPT------------------------------GSICIPPRRRRLYIQKLHEWA-SRG-------------GQSDKLRTAFIQSAAIETFFLWHKYKAENTKTQSVGSPLLLLPQLPRSGSDDKDPETSLKSGTIPIDFLRLMFYTIADYKDIFEGKNMEVVNLLKDGSPSDKEMQERESKIKDAIDKVFPNSDNKKHSGVPSQ-TGNTTPQTLWSKYAEPIWNGMICALTY-RDSEEKGGT--PTQNNTVK--
A0A2I0BZ82/1309-1526_1561-1596               --------GNLTQACKQKYG-PKAPTGWKCVPS-GDSTTTGEARARRVARSAEPRGSEPTSDKGSICVPPRRRKLYLGGFKRLTDGTAVSSETTSATSSHASNGDALLTAFVESASVETFFAWHKYKMEKKQPAQEGAG-LGLSLLEQEVSPEDDPEKQLQTGTIPPDFLRLMFYTLGDYRDILDGKNMEVVNLLKDGSPSDKEMYTRENKINQAIDNHFSKNENQA-----------TTPKTWWQKNGEHIWNGMICALTY-EDNGAKGTSNALQQ-------
W7K1T7/692-909_944-980                       --------GNLTQACKQKYG-PKAPTGWKCVPS-GDSTTTGEARARRVARSAEPRGSEPTSDKGSICVPPRRRKLYLGGFKRLTDGTAVSSETTSATSSHASNGDALLTAFVESASVETFFAWHKYKMEKKQPAQEGAG-LGLSLLEQEVSPEDDPEKQLQTGTIPPDFLRLMFYTLGDYRDILDGKNMEVVNLLKDGSPSDKEMYTRENKINQAIDNHFSKNENQA-----------TTPKTWWQKNGEHIWNGMICALTY-EDNGAKGTSNALQQN------
#=GC scorecons                               11110111349549945996135433999977304324121211212122220012111121297797999997996345345604441111111111000645424224975996799995999993764344444440535356264472256965495596993794959999669959963966446456364965553773574344324946363445764134141302324665459454654996999999990496549633004572222100
#=GC scorecons_70                            __________*__**__***______******_______________________________*************_______*_________________*________**_********_*****_**_______________*_*__*___***__*__*_**_**_*_********_***_***_____*_*_**____**__*_______*_*_*____**_____________**___*___*__**_********__**__**______*_______
#=GC scorecons_80                            __________*__**__**_______*****________________________________*_**_*****_**__________________________________*__**_*****_*****_*__________________________*___*__*_**_**_*_****__**_**__*___________*_____*___________*____________________________*______**_********__*___*_______*_______
#=GC scorecons_90                            __________*__**__**_______****_________________________________*__*_*****_**__________________________________*__**__****_*****____________________________*___*__*_**__*_*_****__**_**__*___________*_________________*____________________________*______**_********__*___*_______________
//