# STOCKHOLM 1.0 #=GF ID 1.10.287.3990/FF/000004 #=GF DE 26S proteasome regulatory subunit N10 #=GF AC 1.10.287.3990/FF/000004 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 86.145 #=GS P55034/219-296 AC P55034 #=GS P55034/219-296 OS Arabidopsis thaliana #=GS P55034/219-296 DE 26S proteasome non-ATPase regulatory subunit 4 homolog #=GS P55034/219-296 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS P55034/219-296 DR GO; GO:0000502; GO:0001653; GO:0005515; GO:0005634; GO:0005829; GO:0006974; GO:0009408; GO:0009555; GO:0009651; GO:0009733; GO:0009735; GO:0009737; GO:0009744; GO:0010029; GO:0010150; GO:0016020; GO:0030163; GO:0031593; GO:0043161; GO:0043248; GO:0048366; GO:0048455; GO:0048528; GO:0048767; GO:0051788; #=GS A0A178V4I4/219-296 AC A0A178V4I4 #=GS A0A178V4I4/219-296 OS Arabidopsis thaliana #=GS A0A178V4I4/219-296 DE RPN10 #=GS A0A178V4I4/219-296 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9LM05/225-315 AC Q9LM05 #=GS Q9LM05/225-315 OS Physcomitrella patens #=GS Q9LM05/225-315 DE Multiubiquitin chain-binding protein #=GS Q9LM05/225-315 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS Q7PNN9/210-297 AC Q7PNN9 #=GS Q7PNN9/210-297 OS Anopheles gambiae #=GS Q7PNN9/210-297 DE 26S proteasome regulatory subunit N10 #=GS Q7PNN9/210-297 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS E9G254/208-272 AC E9G254 #=GS E9G254/208-272 OS Daphnia pulex #=GS E9G254/208-272 DE Uncharacterized protein #=GS E9G254/208-272 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; #=GS F4NY76/210-299 AC F4NY76 #=GS F4NY76/210-299 OS Batrachochytrium dendrobatidis JAM81 #=GS F4NY76/210-299 DE Uncharacterized protein #=GS F4NY76/210-299 DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; #=GS A0A1D6KBS7/213-300 AC A0A1D6KBS7 #=GS A0A1D6KBS7/213-300 OS Zea mays #=GS A0A1D6KBS7/213-300 DE 26S proteasome non-ATPase regulatory subunit 4-like protein #=GS A0A1D6KBS7/213-300 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A0D3BJ90/219-296 AC A0A0D3BJ90 #=GS A0A0D3BJ90/219-296 OS Brassica oleracea var. oleracea #=GS A0A0D3BJ90/219-296 DE Uncharacterized protein #=GS A0A0D3BJ90/219-296 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS V4P1C8/219-296 AC V4P1C8 #=GS V4P1C8/219-296 OS Eutrema salsugineum #=GS V4P1C8/219-296 DE Uncharacterized protein #=GS V4P1C8/219-296 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS R0GIY1/219-296 AC R0GIY1 #=GS R0GIY1/219-296 OS Capsella rubella #=GS R0GIY1/219-296 DE Uncharacterized protein #=GS R0GIY1/219-296 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS D7MFL8/219-296 AC D7MFL8 #=GS D7MFL8/219-296 OS Arabidopsis lyrata subsp. lyrata #=GS D7MFL8/219-296 DE Multiubiquitin chain binding protein MBP1 #=GS D7MFL8/219-296 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A078FIZ8/213-290 AC A0A078FIZ8 #=GS A0A078FIZ8/213-290 OS Brassica napus #=GS A0A078FIZ8/213-290 DE BnaC03g60090D protein #=GS A0A078FIZ8/213-290 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4D2N2/219-296 AC M4D2N2 #=GS M4D2N2/219-296 OS Brassica rapa subsp. pekinensis #=GS M4D2N2/219-296 DE Uncharacterized protein #=GS M4D2N2/219-296 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A3P6C5R2/213-290 AC A0A3P6C5R2 #=GS A0A3P6C5R2/213-290 OS Brassica rapa #=GS A0A3P6C5R2/213-290 DE Uncharacterized protein #=GS A0A3P6C5R2/213-290 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; #=GS A0A3P6F6U0/210-289 AC A0A3P6F6U0 #=GS A0A3P6F6U0/210-289 OS Brassica oleracea #=GS A0A3P6F6U0/210-289 DE Uncharacterized protein #=GS A0A3P6F6U0/210-289 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; #=GS A0A182X529/747-833 AC A0A182X529 #=GS A0A182X529/747-833 OS Anopheles quadriannulatus #=GS A0A182X529/747-833 DE Uncharacterized protein #=GS A0A182X529/747-833 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles quadriannulatus; #=GS A0A182V998/699-785 AC A0A182V998 #=GS A0A182V998/699-785 OS Anopheles merus #=GS A0A182V998/699-785 DE Uncharacterized protein #=GS A0A182V998/699-785 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles merus; #=GS A0A177WMS9/217-306 AC A0A177WMS9 #=GS A0A177WMS9/217-306 OS Batrachochytrium dendrobatidis JEL423 #=GS A0A177WMS9/217-306 DE Uncharacterized protein #=GS A0A177WMS9/217-306 DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; #=GS A0A078G7D8/213-289 AC A0A078G7D8 #=GS A0A078G7D8/213-289 OS Brassica napus #=GS A0A078G7D8/213-289 DE BnaA06g37370D protein #=GS A0A078G7D8/213-289 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GF SQ 19 P55034/219-296 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTASAS-QE------------TVARTTDKNAE-PMDEDSALLDQAIAMSVG------ A0A178V4I4/219-296 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTASAS-QE------------TVARTTDKNAE-PMDEDSALLDQAIAMSVG------ Q9LM05/225-315 DPNLDPELALALRVSMEEERARQEAAMKRSAEDSTAKGQQAGESSSA-PDVAMSDV------GLVDTTDKSKDMMIDDDTALLQQAIAMSMAQAAQAA Q7PNN9/210-297 DPNEDPELALALRVSMEEQRLRQEEEQRRATANSAADGTAGAGAGAG-SDKEASGAAA---GTGAGASASAGGSEPHAEEAMLERALALSTG------ E9G254/208-272 DPNEDPELALALRVSMEEQRQRQEDEARRSGNPPA---------------------------TEPAAATAIGGAPASNEDAMLERALAMSMD------ F4NY76/210-299 DPSLDPELALALRISMEEERARQEKTVPASESPSKKVNAPPSASGGTLEDDMLAQALAMSVQGTEAHNDEDVE-MVDEDEA-MARAIAMSMG------ A0A1D6KBS7/213-300 DPNVDPELALVLLISMEEERLRQEAAAKKAREESSKTENEGQSSTSN-GDIVMADA-----EPEPNSYTEDKGLHCKDEGQLLEKARKIRIEDY---- A0A0D3BJ90/219-296 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTASAS-QE------------TVARTTEKNAE-PMDEDNALLDQAIAMSVG------ V4P1C8/219-296 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTASAS-QE------------TVARTTEKNAE-PMDEDNALLDQAIAMSVG------ R0GIY1/219-296 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTASAS-QE------------TVARTTEKNAE-PMDEDNALLDQAIAMSVG------ D7MFL8/219-296 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTASAS-QE------------TVARTTEKNAE-PMDEDSALLDQAIAMSVG------ A0A078FIZ8/213-290 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTASAS-QE------------TVARTTEKNAE-PMDEDNALLDQAIAMSVG------ M4D2N2/219-296 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTASAS-QE------------TVARTTEKNAE-PMDEDNALLDQAIAMSVG------ A0A3P6C5R2/213-290 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTASAS-QE------------TVARTTEKNAE-PMDEDNALLDQAIAMSVG------ A0A3P6F6U0/210-289 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDQDG--ASAS-QE------------TVARTTEKNAE-PMDEDNALLNQAIAMSVGDV--NM A0A182X529/747-833 DPNEDPELALALRVSMEEQRLRQEEEQRRATANSAADGTAGAGAGAG-SDKEASGAAA---GTGAGASASAGGSEPHAEEAMLERALALST------- A0A182V998/699-785 DPNEDPELALALRVSMEEQRLRQEEEQRRATANSAADGTAGAGAGAG-SDKEASGAAA---GTGAGASASAGGSEPHAEEAMLERALALST------- A0A177WMS9/217-306 DPSLDPELALALRISMEEERARQEKTVPASESPSKKVNAPPSASGGTLEDDMLAQALAMSVQGTEAHNDEDVE-MVDEDEA-MARAIAMSMG------ A0A078G7D8/213-289 DPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDQDGASASAS-QE------------TVARTTEKNAE-PMDEDNALLNQAIAMSV------- #=GC scorecons 99749999998977999969599945455644454434335335454035001111010000635444444460445574747569576754000000 #=GC scorecons_70 ***_****************_***_____*________________________________________________*_*_*__*_***________ #=GC scorecons_80 ***_**************_*_***______________________________________________________*_*_*__*_*_*________ #=GC scorecons_90 **__********__****_*_***_____________________________________________________________*____________ //