# STOCKHOLM 1.0
#=GF ID 3.80.10.10/FF/002207
#=GF DE MHC class II transactivator
#=GF AC 3.80.10.10/FF/002207
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 8.770
#=GS P79621/832-1067      AC P79621
#=GS P79621/832-1067      OS Mus musculus
#=GS P79621/832-1067      DE MHC class II transactivator
#=GS P79621/832-1067      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS P79621/832-1067      DR GO; GO:0000122; GO:0008022; GO:0009986; GO:0016605; GO:0033613; GO:0034341; GO:0044212; GO:0044877; GO:0045345; GO:0045348; GO:0045892; GO:0045893; GO:0045944; GO:0046677; 
#=GS P79621/832-1067      DR EC; 2.7.11.1; 
#=GS A0A1A6GSZ5/818-1052  AC A0A1A6GSZ5
#=GS A0A1A6GSZ5/818-1052  OS Neotoma lepida
#=GS A0A1A6GSZ5/818-1052  DE Uncharacterized protein
#=GS A0A1A6GSZ5/818-1052  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Neotominae; Neotoma; Neotoma lepida; 
#=GF SQ 2
P79621/832-1067              --LELLHCAHETQQPGIWEHVAHQLPGHLSFLGTRLTPPDVYVLGRALETASQDFSLDLRQTGVEPSGLGNLVGLSCVTSFRASLSDTMALWESLQQQGEAQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAAKDLPAIRDLKKLEFALGPILGPQAFPTLAKILPAFSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPAL
A0A1A6GSZ5/818-1052          RLLELLHCAHETQDLGIWEHVAHQLPGHLSFLGTRLTPPDVHVLGRALETASQDFSLDLRQTGIEPSGLGNLVGLSCVTSFRASLSDTMVLWESLRQRGEPQLLQVAEEKFTIEPFKAKSPKDVEDLDSLVQTHRLRNPSEDAAPDLPAIRDLKKLEFALGPVLGPQAFPTLAKVLPAFSSLQHLDLDSLSENKIGDEGVSKLSATFPQLKVLETLNLSQNSITDVGACKLAEAL---
#=GC scorecons               0099999999999229999999999999999999999999959999999999999999999995999999999999999999999999939999949499399993999999999999999999999929999499999999991999999999999999995999999999995999999999999999999999939999999999999399999999939999999999999000
#=GC scorecons_70            __***********__**************************_*********************_*************************_*****_*_**_****_**********************_****_**********_*****************_***********_**********************_*************_*********_*************___
#=GC scorecons_80            __***********__**************************_*********************_*************************_*****_*_**_****_**********************_****_**********_*****************_***********_**********************_*************_*********_*************___
#=GC scorecons_90            __***********__**************************_*********************_*************************_*****_*_**_****_**********************_****_**********_*****************_***********_**********************_*************_*********_*************___
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