# STOCKHOLM 1.0
#=GF ID 3.40.1340.10/FF/000004
#=GF DE DNA-directed RNA polymerases I, II, and III subunit RPABC1
#=GF AC 3.40.1340.10/FF/000004
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 40.572
#=GS A0A087WWX0/1-58  AC A0A087WWX0
#=GS A0A087WWX0/1-58  OS Homo sapiens
#=GS A0A087WWX0/1-58  DE DNA-directed RNA polymerases I, II, and III subunit RPABC1
#=GS A0A087WWX0/1-58  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS A0A087WWX0/1-58  DR GO; GO:0005654; 
#=GS H3ESN4/1-63      AC H3ESN4
#=GS H3ESN4/1-63      OS Pristionchus pacificus
#=GS H3ESN4/1-63      DE Uncharacterized protein
#=GS H3ESN4/1-63      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS B7Q5X9/1-62      AC B7Q5X9
#=GS B7Q5X9/1-62      OS Ixodes scapularis
#=GS B7Q5X9/1-62      DE RNA polymerase, 25-kDa subunit, putative
#=GS B7Q5X9/1-62      DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS A0A093QKQ3/1-57  AC A0A093QKQ3
#=GS A0A093QKQ3/1-57  OS Manacus vitellinus
#=GS A0A093QKQ3/1-57  DE DNA-directed RNA polymerases I, II, and III subunit RPABC1
#=GS A0A093QKQ3/1-57  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Passeriformes; Pipridae; Manacus; Manacus vitellinus; 
#=GS A0A091RJF9/1-58  AC A0A091RJF9
#=GS A0A091RJF9/1-58  OS Mesitornis unicolor
#=GS A0A091RJF9/1-58  DE DNA-directed RNA polymerases I, II, and III subunit RPABC1
#=GS A0A091RJF9/1-58  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Gruiformes; Mesitornithidae; Mesitornis; Mesitornis unicolor; 
#=GS A0A087R363/1-58  AC A0A087R363
#=GS A0A087R363/1-58  OS Aptenodytes forsteri
#=GS A0A087R363/1-58  DE DNA-directed RNA polymerases I, II, and III subunit RPABC1
#=GS A0A087R363/1-58  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Sphenisciformes; Spheniscidae; Aptenodytes; Aptenodytes forsteri; 
#=GS A0A091HXY9/1-58  AC A0A091HXY9
#=GS A0A091HXY9/1-58  OS Buceros rhinoceros silvestris
#=GS A0A091HXY9/1-58  DE DNA-directed RNA polymerases I, II, and III subunit RPABC1
#=GS A0A091HXY9/1-58  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Bucerotiformes; Bucerotidae; Buceros; Buceros rhinoceros; Buceros rhinoceros silvestris; 
#=GS A0A093CK84/1-57  AC A0A093CK84
#=GS A0A093CK84/1-57  OS Tauraco erythrolophus
#=GS A0A093CK84/1-57  DE DNA-directed RNA polymerases I, II, and III subunit RPABC1
#=GS A0A093CK84/1-57  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Musophagiformes; Musophagidae; Tauraco; Tauraco erythrolophus; 
#=GS A0A2J8R9W6/1-57  AC A0A2J8R9W6
#=GS A0A2J8R9W6/1-57  OS Pongo abelii
#=GS A0A2J8R9W6/1-57  DE POLR2E isoform 12
#=GS A0A2J8R9W6/1-57  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS A0A2J8J2A3/1-57  AC A0A2J8J2A3
#=GS A0A2J8J2A3/1-57  OS Pan troglodytes
#=GS A0A2J8J2A3/1-57  DE POLR2E isoform 12
#=GS A0A2J8J2A3/1-57  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GF SQ 10
A0A087WWX0/1-58          -----XEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQE
H3ESN4/1-63              MFVFFPDDAKIGIKTIKAICQQMQEQNITRAIICVQTGMTPSAKQAIADMAPKYTLEQFLEAE
B7Q5X9/1-62              MFVFFPDEPKIGIKTIKTYCQRMQEENITRAIIVVQQGMTPSAKQALGDMAPKYILEHFLES-
A0A093QKQ3/1-57          ------EEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQE
A0A091RJF9/1-58          -----PEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQE
A0A087R363/1-58          -----PEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQE
A0A091HXY9/1-58          -----PEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQE
A0A093CK84/1-57          ------EEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQE
A0A2J8R9W6/1-57          ------EEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQE
A0A2J8J2A3/1-57          ------EEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQE
#=GC scorecons           111113676969999994599699969999969599599999999564999999699799645
#=GC scorecons_70        ______***********__************_*_**_********_*_************___
#=GC scorecons_80        _______*_*_******__**_***_*****_*_**_********___******_*****___
#=GC scorecons_90        _________*_******__**_***_*****_*_**_********___******_**_**___
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