# STOCKHOLM 1.0
#=GF ID 3.30.70.370/FF/000019
#=GF DE Polymerase (DNA directed), theta
#=GF AC 3.30.70.370/FF/000019
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 42.215
#=GS I3JQT8/2056-2072_2113-2144_2289-2308_2344-2395      AC I3JQT8
#=GS I3JQT8/2056-2072_2113-2144_2289-2308_2344-2395      OS Oreochromis niloticus
#=GS I3JQT8/2056-2072_2113-2144_2289-2308_2344-2395      DE Polymerase (DNA directed), theta
#=GS I3JQT8/2056-2072_2113-2144_2289-2308_2344-2395      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Cichlomorphae; Cichliformes; Cichlidae; Pseudocrenilabrinae; Oreochromini; Oreochromis; Oreochromis niloticus; 
#=GS F1Q4P4/2236-2252_2292-2327_2472-2568                AC F1Q4P4
#=GS F1Q4P4/2236-2252_2292-2327_2472-2568                OS Danio rerio
#=GS F1Q4P4/2236-2252_2292-2327_2472-2568                DE Polymerase (DNA directed), theta
#=GS F1Q4P4/2236-2252_2292-2327_2472-2568                DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A3Q4AXF4/1855-1871_1901-1932_2077-2096_2123-2174  AC A0A3Q4AXF4
#=GS A0A3Q4AXF4/1855-1871_1901-1932_2077-2096_2123-2174  OS Mola mola
#=GS A0A3Q4AXF4/1855-1871_1901-1932_2077-2096_2123-2174  DE Polymerase (DNA directed), theta
#=GS A0A3Q4AXF4/1855-1871_1901-1932_2077-2096_2123-2174  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Tetraodontiformes; Moloidei; Molidae; Mola; Mola mola; 
#=GS A0A3P9LWQ1/1899-1915_1951-1984_2129-2148_2169-2220  AC A0A3P9LWQ1
#=GS A0A3P9LWQ1/1899-1915_1951-1984_2129-2148_2169-2220  OS Oryzias latipes
#=GS A0A3P9LWQ1/1899-1915_1951-1984_2129-2148_2169-2220  DE Polymerase (DNA directed), theta
#=GS A0A3P9LWQ1/1899-1915_1951-1984_2129-2148_2169-2220  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3Q2UV22/1791-1807_1846-1877_2022-2041_2070-2121  AC A0A3Q2UV22
#=GS A0A3Q2UV22/1791-1807_1846-1877_2022-2041_2070-2121  OS Haplochromis burtoni
#=GS A0A3Q2UV22/1791-1807_1846-1877_2022-2041_2070-2121  DE Uncharacterized protein
#=GS A0A3Q2UV22/1791-1807_1846-1877_2022-2041_2070-2121  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Cichlomorphae; Cichliformes; Cichlidae; Pseudocrenilabrinae; Haplochromini; Haplochromis; Haplochromis burtoni; 
#=GS A0A3P9D2W7/1837-1853_1892-1923_2068-2087_2116-2167  AC A0A3P9D2W7
#=GS A0A3P9D2W7/1837-1853_1892-1923_2068-2087_2116-2167  OS Maylandia zebra
#=GS A0A3P9D2W7/1837-1853_1892-1923_2068-2087_2116-2167  DE Uncharacterized protein
#=GS A0A3P9D2W7/1837-1853_1892-1923_2068-2087_2116-2167  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Cichlomorphae; Cichliformes; Cichlidae; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex; Maylandia zebra; 
#=GS H2LKR3/1351-1367_1403-1436_1581-1600_1621-1672      AC H2LKR3
#=GS H2LKR3/1351-1367_1403-1436_1581-1600_1621-1672      OS Oryzias latipes
#=GS H2LKR3/1351-1367_1403-1436_1581-1600_1621-1672      DE Uncharacterized protein
#=GS H2LKR3/1351-1367_1403-1436_1581-1600_1621-1672      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS Q6ZM94/1899-1915_1949-1950_1972-1990_2135-2231      AC Q6ZM94
#=GS Q6ZM94/1899-1915_1949-1950_1972-1990_2135-2231      OS Danio rerio
#=GS Q6ZM94/1899-1915_1949-1950_1972-1990_2135-2231      DE Novel protein similar to humna DNA-directed polymerase theta (POLQ)
#=GS Q6ZM94/1899-1915_1949-1950_1972-1990_2135-2231      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A0R4IPZ0/2106-2128_2273-2369                      AC A0A0R4IPZ0
#=GS A0A0R4IPZ0/2106-2128_2273-2369                      OS Danio rerio
#=GS A0A0R4IPZ0/2106-2128_2273-2369                      DE Polymerase (DNA directed), theta
#=GS A0A0R4IPZ0/2106-2128_2273-2369                      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GF SQ 9
I3JQT8/2056-2072_2113-2144_2289-2308_2344-2395              TATGRVSFTEPNIQNVP----GTSEQGPAFSVSMRHAFIPFSGGMILAADYSQADIVKLATVNIQKRLQNTYP-------------------------GAYFILQLHDELIYEATEEDLIQVAQIVKREMESAVKLYVKLKAKVKVGPSW
F1Q4P4/2236-2252_2292-2327_2472-2568                        TATGRVSFTEPNIQNVPKVSDKSPDKGMQFSVSMRHAFVPFSGGLILAVDYSQADIVKLATINIQRRIEEAFPGVPTSHQHPSIRLGGRHRNQFRPLRGGYFILQLHDELIYEVAEEDVIQVAQIVKREMESVVKLYVKLRVKVKVGPSW
A0A3Q4AXF4/1855-1871_1901-1932_2077-2096_2123-2174          TATGRVSFTEPNIQNVP----CREKQGSAFSVSMRHAFVPFSGGMILAADYSQADIVKLATVNIQKRLRQTYP-------------------------GAYFVLQLHDELIYETTEEDVIQVAQIVKREMESAVKLYVKLKAKVKVGPSW
A0A3P9LWQ1/1899-1915_1951-1984_2129-2148_2169-2220          TATGRVSFTEPNIQNVP--TRGLAEQGPAFSVSMRHAFVPFSGGMILAADYSQADIVKLATVNIQKRLRKTYP-------------------------GAYFILQLHDELIYETTQEDLIQVAQIVKREMESAVKLYVKLKVNVKMGCSW
A0A3Q2UV22/1791-1807_1846-1877_2022-2041_2070-2121          TATGRVSFTEPNIQNVP----GTSEQGPAFSVSMRHAFIPFSGGMILAADYSQADIVKLATVNIQKRLRNTYP-------------------------GAYFILQLHDELIYEATEEDLIQVAQIVKREMESVVKLYVKLKAKVKVGPSW
A0A3P9D2W7/1837-1853_1892-1923_2068-2087_2116-2167          TATGRVSFTEPNIQNVP----GTSEQGPAFSVSMRHAFIPFSGGMILAADYSQADIVKLATVNIQKRLRNTYP-------------------------GAYFILQLHDELIYEATEEDLIQVAQIVKREMESVVKLYVKLKAKVKVGPSW
H2LKR3/1351-1367_1403-1436_1581-1600_1621-1672              TATGRVSFTEPNIQNVP--TRGLAEQGPAFSVSMRHAFVPFSGGMILAADYSQADIVKLATVNIQKRLQKTYP-------------------------GAYFILQLHDELIYETTQEDLIQVAQIVKREMESAVKLYVKLKVKVKMGCSW
Q6ZM94/1899-1915_1949-1950_1972-1990_2135-2231              TATGRVSFTEPNIQNVP---------------QLRHAFVPFSGGLILAVDYSQADIVKLATINIQRRIEEAFPGVPTSHQHPSIRLGGRHRNQFRPLRGGYFILQLHDELIYEVAEEDVIQVAQIVKREMESVVKLYVKLRVKVKVGPSW
A0A0R4IPZ0/2106-2128_2273-2369                              ------------------------------SVSMRHAFVPFSGGLILAVDYSQADIVKLATINIQRRIEEAFPGVPTSHQHPSIRLGGRHRNQFRPLRGGYFILQLHDELIYEVAEEDVIQVAQIVKREMESVVKLYVKLRVKVKVGPSW
#=GC scorecons                                              555555555555555550000211233223667799997999996999599999999999969996965467911111111111111111111111119599899999999995679969999999999999699999996679979699
#=GC scorecons_70                                           ______________________________******************_******************____**_________________________*_*************__*****************_********_********
#=GC scorecons_80                                           _________________________________***********_***_************_***_*____**_________________________*_*************__***_*************_*******__*****_**
#=GC scorecons_90                                           __________________________________****_*****_***_************_***_*_____*_________________________*_*************___**_*************_*******___**_*_**
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