# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000844
#=GF DE Proteins containing the RNA recognition motif
#=GF AC 3.30.70.330/FF/000844
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 75.665
#=GS Q9USP9/229-319      AC Q9USP9
#=GS Q9USP9/229-319      OS Schizosaccharomyces pombe 972h-
#=GS Q9USP9/229-319      DE Uncharacterized RNA-binding protein C902.04
#=GS Q9USP9/229-319      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS Q9USP9/229-319      DR GO; GO:0000790; GO:0003723; GO:0005515; GO:0005634; GO:0016604; GO:1902802; GO:1990477; 
#=GS A0A0D1E225/343-431  AC A0A0D1E225
#=GS A0A0D1E225/343-431  OS Ustilago maydis 521
#=GS A0A0D1E225/343-431  DE Uncharacterized protein
#=GS A0A0D1E225/343-431  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS A0A177WR98/309-398  AC A0A177WR98
#=GS A0A177WR98/309-398  OS Batrachochytrium dendrobatidis JEL423
#=GS A0A177WR98/309-398  DE Uncharacterized protein
#=GS A0A177WR98/309-398  DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS V5ELN8/325-412      AC V5ELN8
#=GS V5ELN8/325-412      OS Kalmanozyma brasiliensis GHG001
#=GS V5ELN8/325-412      DE Uncharacterized protein
#=GS V5ELN8/325-412      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma; Kalmanozyma brasiliensis; 
#=GS R9PB18/342-429      AC R9PB18
#=GS R9PB18/342-429      OS Pseudozyma hubeiensis SY62
#=GS R9PB18/342-429      DE Uncharacterized protein
#=GS R9PB18/342-429      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; 
#=GS A0A077R1Z5/337-427  AC A0A077R1Z5
#=GS A0A077R1Z5/337-427  OS Melanopsichium pennsylvanicum 4
#=GS A0A077R1Z5/337-427  DE Rrm domain-containing protein
#=GS A0A077R1Z5/337-427  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Melanopsichium; Melanopsichium pennsylvanicum; 
#=GS A0A081CEM0/321-408  AC A0A081CEM0
#=GS A0A081CEM0/321-408  OS Moesziomyces antarcticus
#=GS A0A081CEM0/321-408  DE Zinc finger protein
#=GS A0A081CEM0/321-408  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; 
#=GS I2FLW5/338-426      AC I2FLW5
#=GS I2FLW5/338-426      OS Ustilago hordei Uh4857-4
#=GS I2FLW5/338-426      DE Uncharacterized protein
#=GS I2FLW5/338-426      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago hordei; 
#=GS W3VM94/324-412      AC W3VM94
#=GS W3VM94/324-412      OS Moesziomyces aphidis DSM 70725
#=GS W3VM94/324-412      DE Uncharacterized protein
#=GS W3VM94/324-412      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces aphidis; 
#=GS A0A1K0H023/338-426  AC A0A1K0H023
#=GS A0A1K0H023/338-426  OS Ustilago bromivora
#=GS A0A1K0H023/338-426  DE Uncharacterized protein
#=GS A0A1K0H023/338-426  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago bromivora; 
#=GS M9LQG7/324-411      AC M9LQG7
#=GS M9LQG7/324-411      OS Moesziomyces antarcticus T-34
#=GS M9LQG7/324-411      DE Proteins containing the RNA recognition motif
#=GS M9LQG7/324-411      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; 
#=GS A0A177WQ25/309-398  AC A0A177WQ25
#=GS A0A177WQ25/309-398  OS Batrachochytrium dendrobatidis JEL423
#=GS A0A177WQ25/309-398  DE Uncharacterized protein
#=GS A0A177WQ25/309-398  DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS F4P7F0/309-398      AC F4P7F0
#=GS F4P7F0/309-398      OS Batrachochytrium dendrobatidis JAM81
#=GS F4P7F0/309-398      DE Uncharacterized protein
#=GS F4P7F0/309-398      DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GF SQ 13
Q9USP9/229-319              ---HRF---SRNAGNDPTSTALEVRNIPEEHFNEENIRSFFSKFGVLEKVELNPTHHSCVLEFTSHEAANNAWSSPEPIFNNRFIKIFWYNPSKGFH
A0A0D1E225/343-431          -PPGTF-QSSRR-----SNTTLVIENVPAESLDLIKVNEYFKKFGTITNISIDKPGSKALVSYSQPGEAKAAHESPDVIFGNRFVKVYFQRLDEAA-
A0A177WR98/309-398          FAGHTYQQRTRK-----SDTVLVVENIPLESCAMDKVNAYFKAFGALTNIQVDPATQKAVIQYSNAHEALDAYRSPDPIFGNRFVKVYWQ--TEPVN
V5ELN8/325-412              -PPGTF-QSSRR-----SNTTLVIENVPADSLDLIKVNEYFKKFGTITNISIDKPGSKALVSYSQPSEAKTAHESPDVIFGNRFVKVYFQRLDEA--
R9PB18/342-429              -PPGTF-QSARR-----SNTTLVIENVPADSLDLIKVNEYFKKFGTITNISIDKPGSKALVSYSQPAEAKEAHESPDVIFGNRFVKVYFQRLDEA--
A0A077R1Z5/337-427          GPPGTF-QSSRR-----SNTTLVIENVPADSLDLIKVNEYFKKFGTITNISIDKPGSKALVSYSIPTEAKAAHESPDVIFGNRFVKVYFQRLDEAAD
A0A081CEM0/321-408          -PPGTF-QSSRR-----SNTTLVIENVPADSLDLIKVNEYFKKFGTITNISIDQPGSKALVSYSQPGEAKAAHESPDVIFGNRFVKVYFQRLDEA--
I2FLW5/338-426              -PPGTF-QSSRR-----SNTTLVIENVPAESLDLIAVNEYFKKFGTITNISIDKPGSKALVSYSQPSEAKAAHESPDVIFGNRFVKVYFQRLDEAA-
W3VM94/324-412              -PPGTF-QSSRR-----SNTTLVIENVPADSLDLIKVNEYFKKFGTITNISIDQPGSKALVSYSQPGEAKAAHESPDVIFGNRFVKVYFQRLDEAA-
A0A1K0H023/338-426          -PPGTF-QSSRR-----SNTTLVIENVPAESLDLIAVNEYFKKFGTITNISIDKPGSKALVSYSQPSEAKAAHESPDVIFGNRFVKVYFQRLDEAA-
M9LQG7/324-411              -PPGTF-QSSRR-----SNTTLVIENVPADSLDLIKVNEYFKKFGTITNISIDQPGSKALVSYSQPGEAKAAHESPDVIFGNRFVKVYFQRLDEA--
A0A177WQ25/309-398          FAGHTYQQRTRK-----SDTVLVVENIPLESCAMDKVNAYFKAFGALTNIQVDPATQKAVIQYSNAHEALDAYRSPDPIFGNRFVKVYWQ--TEPVN
F4P7F0/309-398              FAGHTYQQRTRK-----SDTVLVVENIPLESCAMDKVNAYFKAFGALTNIQVDPATQKAVIQYSNAHEALDAYRSPDPIFGNRFVKVYWQ--TEPVN
#=GC scorecons              0435670535950000075959676979476444467647965995667746745446666477443694495499759969997977562247521
#=GC scorecons_70           ____**____*______*_*_*******_**_____**_***_**_****__*____***__**___**__*__***_**********_*___*___
#=GC scorecons_80           _____*____*________*_*___*_*_*______*__**__**____*__*_________*_____*__*__***_**_*******_________
#=GC scorecons_90           __________*________*_*___*_*____________*__**_______________________*__*__**__**_***_*___________
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