# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000734
#=GF DE U2 snRNP auxiliary factor large subunit
#=GF AC 3.30.70.330/FF/000734
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 27.110
#=GS D0MXQ4/466-568      AC D0MXQ4
#=GS D0MXQ4/466-568      OS Phytophthora infestans T30-4
#=GS D0MXQ4/466-568      DE U2 snRNP auxiliary factor large subunit
#=GS D0MXQ4/466-568      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS A0A0P1B7G2/467-568  AC A0A0P1B7G2
#=GS A0A0P1B7G2/467-568  OS Plasmopara halstedii
#=GS A0A0P1B7G2/467-568  DE U2 snRNP auxiliary factor large subunit
#=GS A0A0P1B7G2/467-568  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Plasmopara; Plasmopara halstedii; 
#=GS M4B6Z5/437-537      AC M4B6Z5
#=GS M4B6Z5/437-537      OS Hyaloperonospora arabidopsidis Emoy2
#=GS M4B6Z5/437-537      DE U2 snRNP auxiliary factor large subunit
#=GS M4B6Z5/437-537      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Hyaloperonospora; Hyaloperonospora arabidopsidis; 
#=GS A0A080ZRT8/464-565  AC A0A080ZRT8
#=GS A0A080ZRT8/464-565  OS Phytophthora parasitica P1976
#=GS A0A080ZRT8/464-565  DE U2 snRNP auxiliary factor large subunit
#=GS A0A080ZRT8/464-565  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS H3GIY2/618-719      AC H3GIY2
#=GS H3GIY2/618-719      OS Phytophthora ramorum
#=GS H3GIY2/618-719      DE Uncharacterized protein
#=GS H3GIY2/618-719      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS A0A0W8DGC9/372-473  AC A0A0W8DGC9
#=GS A0A0W8DGC9/372-473  OS Phytophthora nicotianae
#=GS A0A0W8DGC9/372-473  DE U2 snRNP auxiliary factor large subunit
#=GS A0A0W8DGC9/372-473  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS A0A329SH97/472-573  AC A0A329SH97
#=GS A0A329SH97/472-573  OS Phytophthora cactorum
#=GS A0A329SH97/472-573  DE U2 snRNP auxiliary factor large subunit
#=GS A0A329SH97/472-573  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS A0A3R7NK17/579-680  AC A0A3R7NK17
#=GS A0A3R7NK17/579-680  OS Phytophthora kernoviae
#=GS A0A3R7NK17/579-680  DE Uncharacterized protein
#=GS A0A3R7NK17/579-680  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora kernoviae; 
#=GS G4YPL8/592-693      AC G4YPL8
#=GS G4YPL8/592-693      OS Phytophthora sojae strain P6497
#=GS G4YPL8/592-693      DE Uncharacterized protein
#=GS G4YPL8/592-693      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora sojae; 
#=GS A0A225WYT2/452-554  AC A0A225WYT2
#=GS A0A225WYT2/452-554  OS Phytophthora megakarya
#=GS A0A225WYT2/452-554  DE U2 snRNP auxiliary factor large subunit
#=GS A0A225WYT2/452-554  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora megakarya; 
#=GS W2YXA1/464-565      AC W2YXA1
#=GS W2YXA1/464-565      OS Phytophthora parasitica P10297
#=GS W2YXA1/464-565      DE U2 snRNP auxiliary factor large subunit
#=GS W2YXA1/464-565      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2PYB1/464-565      AC W2PYB1
#=GS W2PYB1/464-565      OS Phytophthora parasitica INRA-310
#=GS W2PYB1/464-565      DE U2 snRNP auxiliary factor large subunit
#=GS W2PYB1/464-565      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8E0Q3/543-644  AC A0A0W8E0Q3
#=GS A0A0W8E0Q3/543-644  OS Phytophthora nicotianae
#=GS A0A0W8E0Q3/543-644  DE Splicing factor U2AF 50 kDa subunit
#=GS A0A0W8E0Q3/543-644  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS W2WLD6/462-563      AC W2WLD6
#=GS W2WLD6/462-563      OS Phytophthora parasitica CJ01A1
#=GS W2WLD6/462-563      DE U2 snRNP auxiliary factor large subunit
#=GS W2WLD6/462-563      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2GET0/462-563      AC W2GET0
#=GS W2GET0/462-563      OS Phytophthora parasitica
#=GS W2GET0/462-563      DE U2 snRNP auxiliary factor large subunit
#=GS W2GET0/462-563      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS V9ERF1/462-563      AC V9ERF1
#=GS V9ERF1/462-563      OS Phytophthora parasitica P1569
#=GS V9ERF1/462-563      DE U2 snRNP auxiliary factor large subunit
#=GS V9ERF1/462-563      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GF SQ 16
D0MXQ4/466-568              LGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGVLSAVGKVFVEFADVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARREI
A0A0P1B7G2/467-568          -GPPTRVIVLHNMVTPEELEDEEEYADIVDDIKGECERFGAVPSLLLPRPRDGVLSAVGKVYVEFSDVQSAQNAAAELHGRGFSNRTVAVEFMDEGKYARREI
M4B6Z5/437-537              --IPSRVIVLLNMVTPEELEDEEEYTDILDDIKGECEQFGAVPSLLLPRPRDGIPSAVGKVFVEFGDVQAAQNAATELHGRGFSNRTVAVEFMDEGKYARREL
A0A080ZRT8/464-565          -GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVYVEFVDVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRQL
H3GIY2/618-719              -GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVFVEFGEVQSAQSAATELHGRGFSNRTVAVEYMDEGKYARREL
A0A0W8DGC9/372-473          -GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVYVEFGDVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRQL
A0A329SH97/472-573          -GTPSRVVVLLNMVTPEELEDEEEYADIVDDIKGECERFGAVPSLLLPRPRDGVPSAVGKVYVEFGDVQSAQAAATELHGRGFSNRTVAVEYMDEGKYARREL
A0A3R7NK17/579-680          -GPPSRVIVLLNMVTPEELDDEEEYADILDDIKGECERFGTVASLLLPRPRDGVPSAVGKVFIEFGDVQSAQSAATELHGRGFSNRTVAVEFMDEGKYARREL
G4YPL8/592-693              -GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVFVEFGDVQSAQSAATELHGRGFSNRTVAVEFMDEGKYARREL
A0A225WYT2/452-554          LGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVSSLLLPRPRDGVLSAVGKVFVEFGDVQSAQGAATELHGRGFSNRTVAVEYMDEGKYARREL
W2YXA1/464-565              -GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVYVEFGDVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRQL
W2PYB1/464-565              -GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVYVEFGDVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRQL
A0A0W8E0Q3/543-644          -GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVYVEFGDVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRQL
W2WLD6/462-563              -GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVYVEFGDVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRQL
W2GET0/462-563              -GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVYVEFGDVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRQL
V9ERF1/462-563              -GTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVYVEFGDVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRQL
#=GC scorecons              0769799899799999999899999899799999999899897999999999976999999789968997994997999999999999999799999999967
#=GC scorecons_70           _*_***************************************************_*****************_******************************
#=GC scorecons_80           ___***************************************_**********__**********_******_****************************_*
#=GC scorecons_90           ___*_*****_**************_**_********_****_**********__******_***_***_**_**_***************_*********__
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