# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/000658 #=GF DE RNA-binding protein, putative, UPB1 #=GF AC 3.30.70.330/FF/000658 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 75.203 #=GS Q387K1/16-158 AC Q387K1 #=GS Q387K1/16-158 OS Trypanosoma brucei brucei TREU927 #=GS Q387K1/16-158 DE RNA-binding protein, putative #=GS Q387K1/16-158 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; #=GS Q387K1/16-158 DR GO; GO:0003723; GO:0003729; GO:0005634; GO:0005737; GO:0006396; GO:0020022; #=GS Q387K0/1-135 AC Q387K0 #=GS Q387K0/1-135 OS Trypanosoma brucei brucei TREU927 #=GS Q387K0/1-135 DE RNA-binding protein, putative #=GS Q387K0/1-135 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; #=GS Q387K0/1-135 DR GO; GO:0003723; GO:0003729; GO:0005634; GO:0005737; GO:0006396; #=GS Q387J8/31-169 AC Q387J8 #=GS Q387J8/31-169 OS Trypanosoma brucei brucei TREU927 #=GS Q387J8/31-169 DE RNA-binding protein, putative #=GS Q387J8/31-169 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; #=GS Q387J8/31-169 DR GO; GO:0003723; GO:0003729; GO:0005737; GO:0031981; GO:0097014; #=GS Q4QA43/3-130 AC Q4QA43 #=GS Q4QA43/3-130 OS Leishmania major #=GS Q4QA43/3-130 DE Putative RNA-binding protein #=GS Q4QA43/3-130 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; #=GS Q4QA43/3-130 DR GO; GO:0003723; GO:0005737; GO:0031981; GO:0097014; #=GS A0A1G4HZW9/31-169 AC A0A1G4HZW9 #=GS A0A1G4HZW9/31-169 OS Trypanosoma equiperdum #=GS A0A1G4HZW9/31-169 DE RNA-binding protein, putative #=GS A0A1G4HZW9/31-169 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; #=GS E9AH94/55-188 AC E9AH94 #=GS E9AH94/55-188 OS Leishmania infantum #=GS E9AH94/55-188 DE RNA-binding protein, putative, UPB1 #=GS E9AH94/55-188 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; #=GS E9AXC6/1-129 AC E9AXC6 #=GS E9AXC6/1-129 OS Leishmania mexicana MHOM/GT/2001/U1103 #=GS E9AXC6/1-129 DE RNA-binding protein, putative, UPB1 #=GS E9AXC6/1-129 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; #=GS D0A5I2/1-135 AC D0A5I2 #=GS D0A5I2/1-135 OS Trypanosoma brucei gambiense DAL972 #=GS D0A5I2/1-135 DE RNA-binding protein, putative #=GS D0A5I2/1-135 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei gambiense; #=GS A0A3Q8ID53/1-122 AC A0A3Q8ID53 #=GS A0A3Q8ID53/1-122 OS Leishmania donovani #=GS A0A3Q8ID53/1-122 DE RNA-binding protein, putative, UPB1 #=GS A0A3Q8ID53/1-122 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; #=GS Q4QA46/1-132 AC Q4QA46 #=GS Q4QA46/1-132 OS Leishmania major #=GS Q4QA46/1-132 DE Putative RNA-binding protein, UPB1 #=GS Q4QA46/1-132 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; #=GS Q4QA45/1-122 AC Q4QA45 #=GS Q4QA45/1-122 OS Leishmania major #=GS Q4QA45/1-122 DE Putative RNA-binding protein, UPB2 #=GS Q4QA45/1-122 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; #=GS A4I191/1-122 AC A4I191 #=GS A4I191/1-122 OS Leishmania infantum #=GS A4I191/1-122 DE RNA-binding protein, putative, UPB2 #=GS A4I191/1-122 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; #=GS E9BHF5/1-122 AC E9BHF5 #=GS E9BHF5/1-122 OS Leishmania donovani BPK282A1 #=GS E9BHF5/1-122 DE RNA-binding protein, putative, UPB2 #=GS E9BHF5/1-122 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; #=GS E9AXC7/1-122 AC E9AXC7 #=GS E9AXC7/1-122 OS Leishmania mexicana MHOM/GT/2001/U1103 #=GS E9AXC7/1-122 DE RNA-binding protein, putative, UPB2 #=GS E9AXC7/1-122 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; #=GS E9AXC9/3-130 AC E9AXC9 #=GS E9AXC9/3-130 OS Leishmania mexicana MHOM/GT/2001/U1103 #=GS E9AXC9/3-130 DE Putative RNA-binding protein #=GS E9AXC9/3-130 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; #=GS A4I193/1-130 AC A4I193 #=GS A4I193/1-130 OS Leishmania infantum #=GS A4I193/1-130 DE Putative RNA-binding protein #=GS A4I193/1-130 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; #=GS A0A3Q8IBN4/1-130 AC A0A3Q8IBN4 #=GS A0A3Q8IBN4/1-130 OS Leishmania donovani #=GS A0A3Q8IBN4/1-130 DE RNA-binding protein, putative #=GS A0A3Q8IBN4/1-130 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; #=GS E9BHF7/1-130 AC E9BHF7 #=GS E9BHF7/1-130 OS Leishmania donovani BPK282A1 #=GS E9BHF7/1-130 DE RNA-binding protein, putative #=GS E9BHF7/1-130 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; #=GF SQ 18 Q387K1/16-158 TGQSQSELQQQQQQPAQQQQQQQQQQQ---Q---------AP-----PPQPLGQVNQEPDFLRNLMVNYIPTTVDEVQLRQLFERFGAIESVKIVCDRETRQSRGYGFVKFQSASSAQQAIASLNGFVILNKRLKVALAASGHQRGRNMNNGFNAYGGY--G Q387K0/1-135 -------MSQQPQYYTTQQQPPQQQQQ---Q---------AP-----PPS-MGAMNQDLDLLRNLMVNYIPTTVDEVQLRQLFERFGPIESVKIVCDRETRQSRGYGFVKFQSASSAQQAIASLNGFVILNKRLKVALAASGHQRGRNMNNGFNAYGGY--G Q387J8/31-169 -------MTSAPQLPSNEAEAPEGSKQ---HLSGGLTPRAAPF---AAPR--PSFSMEPEPLRNLIVNYLPPMMDEDRLFQLFAQFGPIESVKIIYDKVTRESRGYGFVKYMYFFSATYAVQWLNGYPIAGKRLKVAFANAEAAME--------SYKAMSAS Q4QA43/3-130 ----FAQNGTAPSTPAQQSKP---------E------PDASPVAGEGSTS--GRCAFDPEALRNLIVNYLPPLMNEAQVYELFGQFGRIESVKIIYDKITGESRGYGFVKYYFFFSATYAVSCLNRFEIGGKKLKVAYANAPAAKE--------AY-----D A0A1G4HZW9/31-169 -------MTSAPQLPSNEAEAPEGSKQ---HLSGGLTPRAAPF---AAPR--PSFSMEPEPLRNLIVNYLPPMMDEDRLFQLFAQFGPIESVKIIYDKVTRESRGYGFVKYMYFFSATYAVQWLNGYPIAGKRLKVAFANAEAAME--------SYKAMSAS E9AH94/55-188 T-HLTSVTMSQQMTPPQQQPQQQLP-----Q---------QP-----PQQ--QMYNPEPEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQQAVNELNGFNILNKRLKVALAASGNQRQRNYNPQQNA------N E9AXC6/1-129 --------MSQQMTPPQQQPPQQQQQL---Q---------QQ-----PPQ--QVYNPEPEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQQAVNELNGFNILNKRLKVALAASGNQRQRNYNPQQNA------N D0A5I2/1-135 -------MSQQPQYYTTQQQPPQQQQQ---Q---------AP-----PPS-MGAMNQDLDLLRNLMVNYIPTTVDEVQLRQLFERFGPIESVKIVCDRETRQSRGYGFVKFQSASSAQQAIASLNGFVILNKRLKVALAASGHQRGRNMNNGFNAYGGY--G A0A3Q8ID53/1-122 --------MAQHMA-PQQQPP---------Q---------QP-----PQQ--QMYNPEPEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQQAVNELNGFNILNKRLKVALAASGNQRQRNYNPQQNA------N Q4QA46/1-132 --------MSQQMTPPQQQPQQQQPQQQPPQ---------QQ-----PPQ--QVYNPEPEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQQAVNELNGFNILNKRLKVALAASGNQRQRNYNPHQNA------N Q4QA45/1-122 --------MAQHMA-PQQQPP---------Q---------QQ-----PPQ--QVYNPEPEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQQAVNELNGFNILNKRLKVALAASGNQRQRNYNPHQNA------N A4I191/1-122 --------MAQHMA-PQQQPP---------Q---------QP-----PQQ--QMYNPEPEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQQAVNELNGFNILNKRLKVALAASGNQRQRNYNPQQNA------N E9BHF5/1-122 --------MAQHMA-PQQQPP---------Q---------QP-----PQQ--QMYNPEPEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQQAVNELNGFNILNKRLKVALAASGNQRQRNYNPQQNA------N E9AXC7/1-122 --------MAQHMT-PQQQPP---------Q---------QQ-----PPQ--QVYNPEPEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKYHSAASAQQAVNELNGFNILNKRLKVALAASGNQRQRNYNPQQNA------N E9AXC9/3-130 ----FAQNGSAASTPAQQSKP---------E------PIATPVSGEGSTS--GGYAFDPDALRNLIVNYLPPLMNEAQVYELFGQFGRIESVKIIYDKITGESRGYGFVKYQFFFSATYAVSCLNRFEIGGKKLKVAYANAPAAKE--------AY-----D A4I193/1-130 --MSAAQNGSATSTPAQQSKP---------E------PIAAPVAGEGSTS--GGYAFDPDALRNLIVNYLPPLMNEAQVYELFGQFGRIESVKIIYDKITGESRGYGFVKYQFFFSATYAVSCLNRFEIGGKKLKVAYANAPAAKE--------AY-----D A0A3Q8IBN4/1-130 --MSAAQNGSATSTPAQQSKP---------E------PIAAPVAGEGSTS--GGYAFDPDALRNLIVNYLPPLMNEAQVYELFGQFGRIESVKIIYDKITGESRGYGFVKYQFFFSATYAVSCLNRFEIGGKKLKVAYANAPAAKE--------AY-----D E9BHF7/1-130 --MSAAQNGSATSTPAQQSKP---------E------PIAAPVAGEGSTS--GGYAFDPDALRNLIVNYLPPLMNEAQVYELFGQFGRIESVKIIYDKITGESRGYGFVKYQFFFSATYAVSCLNRFEIGGKKLKVAYANAPAAKE--------AY-----D #=GC scorecons 000001013554444567546110001000600000010157100015540043553777599996999696566957646995699599699976974966999999998554499559743996849459799995956545552212111273000004 #=GC scorecons_70 _________________*_______________________*_______________***_**********__***_**_***_***_**********_*_**********____**__**__**_*_*__******_*_______________*_______ #=GC scorecons_80 _________________*________________________________________*__****_***_*____*_*___**__**_**_***__*__*__*********____**__**__**_*_*__******_*_______________*_______ #=GC scorecons_90 _____________________________________________________________****_***_*____*_____**__**_**_***__*__*__********_____**__*___**_*_*__*_****_*_______________________ //