# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000637
#=GF DE Nonsense-mediated mRNA decay protein Upf3, putative
#=GF AC 3.30.70.330/FF/000637
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 78.885
#=GS Q1K5B7/29-138      AC Q1K5B7
#=GS Q1K5B7/29-138      OS Neurospora crassa OR74A
#=GS Q1K5B7/29-138      DE Uncharacterized protein
#=GS Q1K5B7/29-138      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS Q5BG25/32-144      AC Q5BG25
#=GS Q5BG25/32-144      OS Aspergillus nidulans FGSC A4
#=GS Q5BG25/32-144      DE Nonsense-mediated mRNA decay protein Upf3, putative (AFU_orthologue AFUA_6G11460)
#=GS Q5BG25/32-144      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS A0A1U8QU32/32-144  AC A0A1U8QU32
#=GS A0A1U8QU32/32-144  OS Aspergillus nidulans FGSC A4
#=GS A0A1U8QU32/32-144  DE Uncharacterized protein
#=GS A0A1U8QU32/32-144  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS Q0UNF3/37-130      AC Q0UNF3
#=GS Q0UNF3/37-130      OS Parastagonospora nodorum SN15
#=GS Q0UNF3/37-130      DE Uncharacterized protein
#=GS Q0UNF3/37-130      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum; 
#=GS A7F795/31-140      AC A7F795
#=GS A7F795/31-140      OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A7F795/31-140      DE Uncharacterized protein
#=GS A7F795/31-140      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS A0A1L9P5A0/31-139  AC A0A1L9P5A0
#=GS A0A1L9P5A0/31-139  OS Aspergillus versicolor CBS 583.65
#=GS A0A1L9P5A0/31-139  DE Uncharacterized protein
#=GS A0A1L9P5A0/31-139  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus versicolor; 
#=GS A0A3D8R9D8/31-139  AC A0A3D8R9D8
#=GS A0A3D8R9D8/31-139  OS Aspergillus mulundensis
#=GS A0A3D8R9D8/31-139  DE Uncharacterized protein
#=GS A0A3D8R9D8/31-139  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus mulundensis; 
#=GS Q4WM23/34-141      AC Q4WM23
#=GS Q4WM23/34-141      OS Aspergillus fumigatus Af293
#=GS Q4WM23/34-141      DE Nonsense-mediated mRNA decay protein Upf3, putative
#=GS Q4WM23/34-141      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A2I1CC47/34-141  AC A0A2I1CC47
#=GS A0A2I1CC47/34-141  OS Aspergillus novofumigatus IBT 16806
#=GS A0A2I1CC47/34-141  DE Uncharacterized protein
#=GS A0A2I1CC47/34-141  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus novofumigatus; 
#=GS A0A0S7DGW8/34-141  AC A0A0S7DGW8
#=GS A0A0S7DGW8/34-141  OS Aspergillus lentulus
#=GS A0A0S7DGW8/34-141  DE Regulator of nonsense transcripts 3A
#=GS A0A0S7DGW8/34-141  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus lentulus; 
#=GS A1DNJ5/34-141      AC A1DNJ5
#=GS A1DNJ5/34-141      OS Aspergillus fischeri NRRL 181
#=GS A1DNJ5/34-141      DE Nonsense-mediated mRNA decay protein Upf3, putative
#=GS A1DNJ5/34-141      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fischeri; 
#=GS A0A0K8LKT7/34-141  AC A0A0K8LKT7
#=GS A0A0K8LKT7/34-141  OS Aspergillus udagawae
#=GS A0A0K8LKT7/34-141  DE Regulator of nonsense transcripts UPF3
#=GS A0A0K8LKT7/34-141  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus udagawae; 
#=GS A0A397G7S9/34-141  AC A0A397G7S9
#=GS A0A397G7S9/34-141  OS Aspergillus thermomutatus
#=GS A0A397G7S9/34-141  DE Uncharacterized protein
#=GS A0A397G7S9/34-141  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus thermomutatus; 
#=GS A0A229WZP5/33-141  AC A0A229WZP5
#=GS A0A229WZP5/33-141  OS Aspergillus turcosus
#=GS A0A229WZP5/33-141  DE Uncharacterized protein
#=GS A0A229WZP5/33-141  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus turcosus; 
#=GS A0A0B0E3N7/29-138  AC A0A0B0E3N7
#=GS A0A0B0E3N7/29-138  OS Neurospora crassa
#=GS A0A0B0E3N7/29-138  DE Uncharacterized protein
#=GS A0A0B0E3N7/29-138  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS A0A1D9QKQ4/31-140  AC A0A1D9QKQ4
#=GS A0A1D9QKQ4/31-140  OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A0A1D9QKQ4/31-140  DE Uncharacterized protein
#=GS A0A1D9QKQ4/31-140  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS A0A0J5Q3G2/34-141  AC A0A0J5Q3G2
#=GS A0A0J5Q3G2/34-141  OS Aspergillus fumigatus Z5
#=GS A0A0J5Q3G2/34-141  DE Nonsense-mediated mRNA decay protein Upf3
#=GS A0A0J5Q3G2/34-141  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A229XRE8/34-141  AC A0A229XRE8
#=GS A0A229XRE8/34-141  OS Aspergillus fumigatus
#=GS A0A229XRE8/34-141  DE Uncharacterized protein
#=GS A0A229XRE8/34-141  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS B0Y8I6/34-141      AC B0Y8I6
#=GS B0Y8I6/34-141      OS Aspergillus fumigatus A1163
#=GS B0Y8I6/34-141      DE Nonsense-mediated mRNA decay protein Upf3, putative
#=GS B0Y8I6/34-141      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GF SQ 19
Q1K5B7/29-138              KTKPQSEGEKVVVRRLPPLLTEEEFFKILGDEWKVGHGKVDWFSYWPGKSSQH-----PSRPSRPSRAYIHVIRKDDLLVLSQAVQNGVWEDAKESYNDPVLNLPPTVELSIHKK
Q5BG25/32-144              --KPVAPRLKLLVRRLPPGLTQEEFETALGAEWKLGAGRVSWAQYKPGKVSKDHGNHSPAKPSRPSRAYLYVVSSEHIAPLSDKVRSTSFLDARNTANDPVLLGPPNLEFAPYAK
A0A1U8QU32/32-144          --KPVAPRLKLLVRRLPPGLTQEEFETALGAEWKLGAGRVSWAQYKPGKVSKDHGNHSPAKPSRPSRAYLYVVSSEHIAPLSDKVRSTSFLDARNTANDPVLLGPPNLEFAPYAK
Q0UNF3/37-130              EAR----------------LTRSEFETMVGDEWKPGAGKVDWVNWRKGKISKD-----AAKPSRPARAYIHVTKQEHVPMLGDRIRDSTFHDAAKSWQDSALVGPPTLEFAPFSK
A7F795/31-140              ASKPASSKLKLIVRRLAPGLTEVEFFSVLGDEWKVGQGKVDWFQYKLGKDSKD-----PSKPSRPSRAYLHLTSGDHLLPFSEVVRKSSFEDAKNTYTDSCLIGPPSVEFAPYSR
A0A1L9P5A0/31-139          -PKPAAPRLKLLVRRLPPGLTQEEFETALGEEWKLGGGKVSWSQYKPGKVSKD-----PAKPSRPSRAYLYVVSSEHIGPLSDKVRATSFLDARNTANDPVLLGPPNLEFAPYAK
A0A3D8R9D8/31-139          -PKPAAPRLKLLVRRLPPGLTQEEFEAALGEAWKVGAGKVSWSQYKPGKISKD-----PAKPSRPSRAYLYVVSSEHITPLSDKVRSTSFLDARNTANDPVLLGPPNLEFAPYAK
Q4WM23/34-141              --KPPAPRLKLLVRRLPPGLTQSEFENAMGPEWMVGAGKVDWYQYKPGKVSKD-----YAKPSRPSRAYIHVTSSEHIAPLSDKVRQTSFVDARNTFNDPVLLGPPSLEFAPYAK
A0A2I1CC47/34-141          --KPPAPRLKLLVRRLPPGLTQSEFENVLGSEWMVGAGKVDWYQYKPGKVSKD-----HAKPSRPSRAYIHVTSSEHIAPLSDKVRQTSFLDARNTFNDPVLLGPPSLEFAPYAK
A0A0S7DGW8/34-141          --KPPAPRLKLLVRRLPPGLTQSEFENALGSEWMVGAGKVDWYQYKPGKVSKD-----HAKPSRPSRAYIHVTSSEHIAPLSDKVRQTSFLDARNTFNDPVLLGPPSLEFAPYAK
A1DNJ5/34-141              --KPPAPRLKLLVRRLPPGLTQSEFENALGSEWMVGAGKVDWYQYKPGKVSKD-----YAKPSRPSRAYIHVTSSEHIAPLSDKIRQTSFLDARNTFNDPVLLGPPSLEFAPYAK
A0A0K8LKT7/34-141          --KPPAPRLKLLVRRLPPGLTQSEFESALGSEWMVGAGKVDWYQYKPGKASKD-----HAKPSRPSRAYIHVTSSEHIAPLSDKVRQTSFLDARTTFNDPVLLGPPSLEFSPYAK
A0A397G7S9/34-141          --KPAGPRLKLLVRRLPPGLSQSEFENALGSEWMAGAGRVDWYQYKPGKVSKD-----HAKPSRPSRAYIHVTSSEHIAPLSDKVRQTSFLDARNTFNDPVLLGPPSLEFAPYAK
A0A229WZP5/33-141          -PKPAAPRLKLLVRRLPPGLTQSEFENALGSEWMAGAGRVDWYQYKPGKVSKD-----HAKPSRPSRAYLHVTSSEHIAPLSDKVRQTSFLDARNTFNDPVLLGPPSLEFAPYAK
A0A0B0E3N7/29-138          KTKPQSEGEKVVVRRLPPLLTEEEFFKILGDEWKVGHGKVDWFSYWPGKSSQH-----PSRPSRPSRAYIHVIRKDDLLVLSQAVQNGVWEDAKESYNDPVLNLPPTVELSIHKK
A0A1D9QKQ4/31-140          ASKPASSKLKLIVRRLAPGLTEVEFFSVLGDEWKVGQGKVDWFQYKLGKDSKD-----PSKPSRPSRAYLHLTSGDHLLPFSEVVRKSSFEDAKNTYTDSCLIGPPSVEFAPYSR
A0A0J5Q3G2/34-141          --KPPAPRLKLLVRRLPPGLTQSEFENAMGPEWMVGAGKVDWYQYKPGKVSKD-----YAKPSRPSRAYIHVTSSEHIAPLSDKVRQTSFVDARNTFNDPVLLGPPSLEFAPYAK
A0A229XRE8/34-141          --KPPAPRLKLLVRRLPPGLTQSEFENAMGPEWMVGAGKVDWYQYKPGKVSKD-----YAKPSRPSRAYIHVTSSEHIAPLSDKVRQTSFVDARNTFNDPVLLGPPSLEFAPYAK
B0Y8I6/34-141              --KPPAPRLKLLVRRLPPGLTQSEFENAMGPEWMVGAGKVDWYQYKPGKVSKD-----YAKPSRPSRAYIHVTSSEHIAPLSDKVRQTSFVDARNTFNDPVLLGPPSLEFAPYAK
#=GC scorecons             0187344447557777574986499445794895595979694575699497700000467999979996775547764577648745563996664696694699569766758
#=GC scorecons_70          __**_____*__****_*_**__**___**_**__*_*****__*__**_***______*************___**___***_**___*_**__*_***_*__**_******_*
#=GC scorecons_80          __*________________**__**____*_**__*_***_*__*__**_**________*********_**___*____**__**_____**_____*__*__**__**__*_*
#=GC scorecons_90          __*________________**__**____*_**__*_*_*_*_____**_*__________****_***______________________**_____*__*__**__*______
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