# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/000525 #=GF DE RNA-binding protein 8A #=GF AC 3.30.70.330/FF/000525 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 81.683 #=GS F4I9J7/41-186 AC F4I9J7 #=GS F4I9J7/41-186 OS Arabidopsis thaliana #=GS F4I9J7/41-186 DE RNA-binding protein Y14 #=GS F4I9J7/41-186 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS F4I9J7/41-186 DR GO; GO:0003729; GO:0005515; GO:0005654; GO:0005730; GO:0005737; GO:0010628; GO:0016604; GO:0035145; #=GS A0A178WGD6/41-186 AC A0A178WGD6 #=GS A0A178WGD6/41-186 OS Arabidopsis thaliana #=GS A0A178WGD6/41-186 DE Y14 #=GS A0A178WGD6/41-186 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A2K1JVM3/58-198 AC A0A2K1JVM3 #=GS A0A2K1JVM3/58-198 OS Physcomitrella patens #=GS A0A2K1JVM3/58-198 DE Uncharacterized protein #=GS A0A2K1JVM3/58-198 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS A0A2K1KA33/58-199 AC A0A2K1KA33 #=GS A0A2K1KA33/58-199 OS Physcomitrella patens #=GS A0A2K1KA33/58-199 DE Uncharacterized protein #=GS A0A2K1KA33/58-199 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS A9RVK7/58-197 AC A9RVK7 #=GS A9RVK7/58-197 OS Physcomitrella patens #=GS A9RVK7/58-197 DE Predicted protein #=GS A9RVK7/58-197 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS B7FAL5/51-195 AC B7FAL5 #=GS B7FAL5/51-195 OS Oryza sativa Japonica Group #=GS B7FAL5/51-195 DE RNA-binding protein Y14A #=GS B7FAL5/51-195 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS B3RRM4/5-163 AC B3RRM4 #=GS B3RRM4/5-163 OS Trichoplax adhaerens #=GS B3RRM4/5-163 DE RNA-binding protein 8A #=GS B3RRM4/5-163 DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; #=GS B7P8N1/1-151 AC B7P8N1 #=GS B7P8N1/1-151 OS Ixodes scapularis #=GS B7P8N1/1-151 DE RNA binding domain-containing protein, putative #=GS B7P8N1/1-151 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; #=GS A0A369RYE2/5-163 AC A0A369RYE2 #=GS A0A369RYE2/5-163 OS Trichoplax sp. H2 #=GS A0A369RYE2/5-163 DE RNA-binding protein 8A #=GS A0A369RYE2/5-163 DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax sp. H2; #=GS A0A087H150/42-182 AC A0A087H150 #=GS A0A087H150/42-182 OS Arabis alpina #=GS A0A087H150/42-182 DE Uncharacterized protein #=GS A0A087H150/42-182 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GS R0IJ97/41-180 AC R0IJ97 #=GS R0IJ97/41-180 OS Capsella rubella #=GS R0IJ97/41-180 DE Uncharacterized protein #=GS R0IJ97/41-180 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A1D6J1U1/36-183 AC A0A1D6J1U1 #=GS A0A1D6J1U1/36-183 OS Zea mays #=GS A0A1D6J1U1/36-183 DE RNA-binding protein 8A #=GS A0A1D6J1U1/36-183 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS D7KHT1/41-187 AC D7KHT1 #=GS D7KHT1/41-187 OS Arabidopsis lyrata subsp. lyrata #=GS D7KHT1/41-187 DE Uncharacterized protein #=GS D7KHT1/41-187 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS I1HFH3/8-184 AC I1HFH3 #=GS I1HFH3/8-184 OS Brachypodium distachyon #=GS I1HFH3/8-184 DE Uncharacterized protein #=GS I1HFH3/8-184 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A3L6R2G1/12-134_186-235 AC A0A3L6R2G1 #=GS A0A3L6R2G1/12-134_186-235 OS Panicum miliaceum #=GS A0A3L6R2G1/12-134_186-235 DE RNA-binding protein 8A #=GS A0A3L6R2G1/12-134_186-235 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; #=GS C5YZM3/41-187 AC C5YZM3 #=GS C5YZM3/41-187 OS Sorghum bicolor #=GS C5YZM3/41-187 DE Uncharacterized protein #=GS C5YZM3/41-187 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS K3Z2A2/13-185 AC K3Z2A2 #=GS K3Z2A2/13-185 OS Setaria italica #=GS K3Z2A2/13-185 DE Uncharacterized protein #=GS K3Z2A2/13-185 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Cenchrinae; Setaria; Setaria italica; #=GS A0A2S3HVX8/14-185 AC A0A2S3HVX8 #=GS A0A2S3HVX8/14-185 OS Panicum hallii #=GS A0A2S3HVX8/14-185 DE Uncharacterized protein #=GS A0A2S3HVX8/14-185 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; #=GS A0A0D3G312/48-188 AC A0A0D3G312 #=GS A0A0D3G312/48-188 OS Oryza barthii #=GS A0A0D3G312/48-188 DE Uncharacterized protein #=GS A0A0D3G312/48-188 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0D9ZTZ8/48-188 AC A0A0D9ZTZ8 #=GS A0A0D9ZTZ8/48-188 OS Oryza glumipatula #=GS A0A0D9ZTZ8/48-188 DE Uncharacterized protein #=GS A0A0D9ZTZ8/48-188 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A2T7DMI3/14-185 AC A0A2T7DMI3 #=GS A0A2T7DMI3/14-185 OS Panicum hallii var. hallii #=GS A0A2T7DMI3/14-185 DE Uncharacterized protein #=GS A0A2T7DMI3/14-185 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; Panicum hallii var. hallii; #=GS A0A1D6FUU3/39-185 AC A0A1D6FUU3 #=GS A0A1D6FUU3/39-185 OS Zea mays #=GS A0A1D6FUU3/39-185 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6FUU3/39-185 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A3L6DQB7/39-185 AC A0A3L6DQB7 #=GS A0A3L6DQB7/39-185 OS Zea mays #=GS A0A3L6DQB7/39-185 DE RNA-binding protein 8A #=GS A0A3L6DQB7/39-185 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS B6SLI2/36-184 AC B6SLI2 #=GS B6SLI2/36-184 OS Zea mays #=GS B6SLI2/36-184 DE RNA-binding protein 8A #=GS B6SLI2/36-184 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS B6TN68/38-186 AC B6TN68 #=GS B6TN68/38-186 OS Zea mays #=GS B6TN68/38-186 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS B6TN68/38-186 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A2Y085/47-189 AC A2Y085 #=GS A2Y085/47-189 OS Oryza sativa Indica Group #=GS A2Y085/47-189 DE Uncharacterized protein #=GS A2Y085/47-189 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GF SQ 26 F4I9J7/41-186 -------------------------------KSAIA--GAN-----GESA--KKTKGRGFREEKDSD--RQRRLSSR----DFESLGSD--GRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGGESYRRKN--- A0A178WGD6/41-186 -------------------------------KSAIA--GAN-----GESA--KKTKGRGFREEKDSD--RQRRLSSR----DFESLGSD--GRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFGEIKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGGESYRRKN--- A0A2K1JVM3/58-198 -----------------------------------G--SAA-----AVDG--RKTKGRGFRDEADAD--RSHRYTEK----EFESLDGS--GGPGPQRSVEGWIILVTGVHEEAQEDDLHESFSEFGEIKNLHLNLDRRTGFVKGYALIEYETKKEAQGAIDNMNGKQLLTQTISVNWAFSSGPLHRRNVRRR---- A0A2K1KA33/58-199 ----------------------------------AA--AAA-----AAAG--RKTKGRGFREEGDAD--RSHRYAVK----EFESLDSG--GGPGPQRSVEGWIILVTGVHEEAQEDDLHEAFSEFGEIKNLHLNLDRRTGFVKGYALIEYETKKEAQAAIDNQNGKQLLTQTISVNWAFSSGPLHRRNVRRR---- A9RVK7/58-197 -----------------------------------G--SAA-----AVDG--RKTKGRGFRDEADAD--RSHRYTEK----EFESLDGS--GGPGPQRSVEGWIILVTGVHEEAQEDDLHESFSEFGEIKNLHLNLDRRTGFVKGYALIEYETKKEAQGAIDNMNGKQLLTQTISVNWAFSSGPLHRRNVRR----- B7FAL5/51-195 --------------------------------------GDD-------GQ--RKTKGRGFRDDA-AP--RDSRLAGAGRASDFDSLGSD--GGPGPVRSIEGWIVLVTGVHEEAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAFSNGPVKRRNIRKRSPRR B3RRM4/5-163 --------------------ELQPTA-EERDEFQMD-DGDDSIQKLKQSA--KKRKGRGFQDDGEEA-----KGSNL----QYESMDVDGDYATGPQRSVEGWIVFVANIHEEAQEDDVYEKFAEYGDVKNLHLNLDRRTGFIKGYALVEFETKKEAQAAIDNLNGTNLLEQTIKVDWCFVKGPQTSGLKRN----- B7P8N1/1-151 MADVLDLDGGE--------------------DFEVDEEGDRNVQKLKERA--RKRKGRGFGADGTA------REDIQ----EYEAMDTDENDEPGPQRC-------------KCKLDDIYEKFAEYGEIKNLHLNLDRRTGFLKGYALVEYETFKEAQAAIDALNGAKILDQTISVDWCFVKGPTKKKRSHRRRDR- A0A369RYE2/5-163 --------------------ELQPTA-EERDEFQMD-DGDDSIQKLKQSA--KKRKGRGFQDDGEEA-----KGSNL----QYESMDVDSDYATGPQRSVEGWIVFVANIHEEAQEDDVYEKFAEYGDVKNLHLNLDRRTGFIKGYALVEFETKKEAQAAIDNLNGTNLLEQTIKVDWCFVKGPQTSGLKRN----- A0A087H150/42-182 --------------------------------SAIA--GAN-----GEST--KKTKGRGFREEKDSD--RQRRLSSR----DFESLGSD--GGLGPQRSIEGWIILVTGVHEEAQEDDISNAFGDFGEIKSLHLNLDRRTGFVKGYALIEYEKSEEAQNAITTMNGAELLTQNVTVDWAFSNGPSVG-SYR------ R0IJ97/41-180 -------------------------------KSAIA--GAN-----GESAPQRKTKGRGFREERDSD--RQRHLSSR----DFESLGSD--GGSGPQRSIEGWIILVSGVHEEAQDDDLFNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYEKKEEAQKAISAMNGAELLTQNVSVDWAFSNGPIA----------- A0A1D6J1U1/36-183 ----------------------------SRLRSTIA--GDD-------AP--RRTKGRGFREDPNSSAPRDSRFGAGGRA-DLDSL-----GGPGPIQSIEGWIVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKELDGAELYEQKMSVDWAFSSGPAKRRFTRKR---- D7KHT1/41-187 -------------------------------KSAIA--GAN-----GESA--KKTKGRGFREEKDSD--RQRRLSSR----DFESLGSD--GGRGPQRSIEGWIILVSGVHEEAQEDDLTNAFGDFGEIKNLHLNLDRRTGFVKGYALIEYEKYEEAQKAISAMNGAELLTQNVSVDWAFSRGPSAE-SYRRKNSR- I1HFH3/8-184 --EVVDFDSDDDDLMDDDAPENNPAP-APRLRSTIAAGGEDSS---AAAA--RKTKGRGFREEPSSS--R----PLTGRA-AFDSLGTD--DGPGPLRSIEGWIVLVTGVHEEAQEDDLHNAFREFGQVKNLHLNLDRRTGFVKGYALIEYESFEEAQAAIKTMDGTELVTQIINVDWAFSNGPAKRRNVRRRS--- A0A3L6R2G1/12-134_186-235 ----VDFDSDDDDLMDEDAPEVNPAPAAPRLRSTIAAGGDS------AAA--RKTKGRGFREEPSSS--R----PLAGRA-DFDSLGSD--DGPGPLRSIEGWIILVTGVHEEAQEDDLHNAFREFGQVKNLHLNLDRRTGFVKGYALIEYESFDEAQAAIKAMDGTELVTQIINVDWAFSSGPVKRRNVRRRE--- C5YZM3/41-187 -------------------------------RSTIA--GDD-------AP--RRTKGRGFREDPNSSAHRDSRFGAGGRA-DLDSL-----GGPGPIQSIEGWIVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKELDGAELHEQIMSVDWAFSSGPAKRRNTRKRSP-- K3Z2A2/13-185 -----DFDSDDDDLMDDDAPEANPAPAAPRLRSTIAAGGDS-----AAAT--RKTKGRGFREEPSSS--R----PLAGRA-DFDSLGSD--DGPGPLRSIEGWIILVTGVHEEAQEDDLHNAFREFGQVKNLHLNLDRRTGFVKGYALIEYESFDEAQAAIKAMDRTELVTQIINVDWAFSSGPVKRKNVRRRS--- A0A2S3HVX8/14-185 ------FDSDDDDLMDDDAPEVNPAPAAPRLRSTIAAGGDS-----TAAA--RKTKGRGFREEPSSS--R----PLAGRA-DFDSLGSD--DGPGPLRSIEGWIILVTGVHEEAQEDDLHNAFREFGQVKNLHLNLDRRTGFVKGYALIEYESFDEAQAAIKAMDGTELVTQIINVDWAFSSGPVKRRNVRRRS--- A0A0D3G312/48-188 --------------------------------------GDD-------GQ--RKTKGRGFRDDA-AP--RDSRLAGAGRASDFDSLGSD--GGPGPVRSIEGWIVLVTGVHEEAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAFSNGPVKRRNIRKR---- A0A0D9ZTZ8/48-188 --------------------------------------GDD-------GQ--RKTKGRGFRDDA-AP--RDSRLAGAGRASDFDSLGSD--GGPGPVRSIEGWIVLVTGVHEEAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAFSNGPVKRRNIRKR---- A0A2T7DMI3/14-185 ------FDSDDDDLMDDDAPEVNPAPAAPRLRSTIAAGGDS-----TAAA--RKTKGRGFREEPSSS--R----PLAGRA-DFDSLGSD--DGPGPLRSIEGWIILVTGVHEEAQEDDLHNAFREFGQVKNLHLNLDRRTGFVKGYALIEYESFDEAQAAIKAMDGTELVTQIINVDWAFSSGPVKRRNVRRRS--- A0A1D6FUU3/39-185 ------------------------------LRSTIA--GDD-------AP--RRTKGRGFREDPNSSATRDSRFGAGGRA-DLDSL-----GGPGPIQSIEGWIVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKELDGAELYKQRMSVDWAFSSGPAKRRNTRKRY--- A0A3L6DQB7/39-185 ------------------------------LRSTIA--GDD-------AP--RRTKGRGFREDPNSSATRDSRFGAGGRA-DLDSL-----GGPGPIQSIEGWIVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKELDGAELYKQRMSVDWAFSSGPAKRRNTRKRY--- B6SLI2/36-184 ----------------------------SRLRSTIA--GDD-------AP--RRTKGRGFREDPNSSAPRDSRFGAGGRA-DLDSL-----GGPGPIQSIEGWIVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKELDGAELYEQKMSVDWAFSSGPAKRRFTRKRS--- B6TN68/38-186 -----------------------------RLRSTIA--GDD-------AP--RRTKGRGFREDPNSSATRDSRFGAGGRA-DLDSL-----GGPGPIQSIEGWIVLVTGVHEEAQEDDLQNAFQEFGQVKNLHLNLDRRTGFVKGYALIEYEKFEEAQAAIKELDGAELYKQRMSVDWAFSSGPAKRRNTRKRSP-- A2Y085/47-189 -------------------------------------GGDD-------GQ--RKTKGRGFRDDA-AP--RDSRLAGAGRASDFDSLGSD--GGPGPVRSIEGWIVLVTGVHEEAQEDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAFSNGPVKRRNIRKRT--- #=GC scorecons 00000000000000000000000000000112324400754000001144007779999976743540061142433222066787434005669947867777667567778787896465947896798989999998987999997989446999699546685685594659797975993454437541000 #=GC scorecons_70 ______________________________________*_____________***********__________________*****______****_*******_**_***********_*_*_***_************************___******__***_**__*_*_******_**______*______ #=GC scorecons_80 ______________________________________*_____________**_******_______________________**________**_**_****__*__*********____*_***_************************___***_**____*__*__*___***_*__**______*______ #=GC scorecons_90 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