# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/000518 #=GF DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GF AC 3.30.70.330/FF/000518 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 74.801 #=GS A0A0P0XYR2/296-401 AC A0A0P0XYR2 #=GS A0A0P0XYR2/296-401 OS Oryza sativa Japonica Group #=GS A0A0P0XYR2/296-401 DE Os11g0139500 protein #=GS A0A0P0XYR2/296-401 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS Q2QY16/271-378 AC Q2QY16 #=GS Q2QY16/271-378 OS Oryza sativa Japonica Group #=GS Q2QY16/271-378 DE Os12g0136200 protein #=GS Q2QY16/271-378 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS B9GBS7/271-378 AC B9GBS7 #=GS B9GBS7/271-378 OS Oryza sativa Japonica Group #=GS B9GBS7/271-378 DE Uncharacterized protein #=GS B9GBS7/271-378 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS F6HHF8/287-411 AC F6HHF8 #=GS F6HHF8/287-411 OS Vitis vinifera #=GS F6HHF8/287-411 DE Uncharacterized protein #=GS F6HHF8/287-411 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS I1JQ30/270-366 AC I1JQ30 #=GS I1JQ30/270-366 OS Glycine max #=GS I1JQ30/270-366 DE Uncharacterized protein #=GS I1JQ30/270-366 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS B9HQ12/269-388 AC B9HQ12 #=GS B9HQ12/269-388 OS Populus trichocarpa #=GS B9HQ12/269-388 DE Uncharacterized protein #=GS B9HQ12/269-388 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS K7UB59/254-372 AC K7UB59 #=GS K7UB59/254-372 OS Zea mays #=GS K7UB59/254-372 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS K7UB59/254-372 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A151TNT3/284-391 AC A0A151TNT3 #=GS A0A151TNT3/284-391 OS Cajanus cajan #=GS A0A151TNT3/284-391 DE Uncharacterized protein #=GS A0A151TNT3/284-391 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; #=GS V7AFR0/295-401 AC V7AFR0 #=GS V7AFR0/295-401 OS Phaseolus vulgaris #=GS V7AFR0/295-401 DE Uncharacterized protein #=GS V7AFR0/295-401 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus; Phaseolus vulgaris; #=GS C5Y449/282-387 AC C5Y449 #=GS C5Y449/282-387 OS Sorghum bicolor #=GS C5Y449/282-387 DE Uncharacterized protein #=GS C5Y449/282-387 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A0E0BF24/350-455 AC A0A0E0BF24 #=GS A0A0E0BF24/350-455 OS Oryza glumipatula #=GS A0A0E0BF24/350-455 DE Uncharacterized protein #=GS A0A0E0BF24/350-455 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0MJE6/267-372 AC A0A0E0MJE6 #=GS A0A0E0MJE6/267-372 OS Oryza punctata #=GS A0A0E0MJE6/267-372 DE Uncharacterized protein #=GS A0A0E0MJE6/267-372 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS I1R3U5/275-382 AC I1R3U5 #=GS I1R3U5/275-382 OS Oryza glaberrima #=GS I1R3U5/275-382 DE Uncharacterized protein #=GS I1R3U5/275-382 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GS A0A0D3HHZ2/371-476 AC A0A0D3HHZ2 #=GS A0A0D3HHZ2/371-476 OS Oryza barthii #=GS A0A0D3HHZ2/371-476 DE Uncharacterized protein #=GS A0A0D3HHZ2/371-476 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0R3Y0/350-455 AC A0A0E0R3Y0 #=GS A0A0E0R3Y0/350-455 OS Oryza rufipogon #=GS A0A0E0R3Y0/350-455 DE Uncharacterized protein #=GS A0A0E0R3Y0/350-455 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS J3NB89/278-385 AC J3NB89 #=GS J3NB89/278-385 OS Oryza brachyantha #=GS J3NB89/278-385 DE Uncharacterized protein #=GS J3NB89/278-385 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; #=GS A0A0D3HHZ3/306-411 AC A0A0D3HHZ3 #=GS A0A0D3HHZ3/306-411 OS Oryza barthii #=GS A0A0D3HHZ3/306-411 DE Uncharacterized protein #=GS A0A0D3HHZ3/306-411 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0BF25/284-390 AC A0A0E0BF25 #=GS A0A0E0BF25/284-390 OS Oryza glumipatula #=GS A0A0E0BF25/284-390 DE Uncharacterized protein #=GS A0A0E0BF25/284-390 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A1D6QHC5/260-372 AC A0A1D6QHC5 #=GS A0A1D6QHC5/260-372 OS Zea mays #=GS A0A1D6QHC5/260-372 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6QHC5/260-372 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6QHD1/260-372 AC A0A1D6QHD1 #=GS A0A1D6QHD1/260-372 OS Zea mays #=GS A0A1D6QHD1/260-372 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6QHD1/260-372 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS C4IYY4/260-372 AC C4IYY4 #=GS C4IYY4/260-372 OS Zea mays #=GS C4IYY4/260-372 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS C4IYY4/260-372 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6EIH7/262-370 AC A0A1D6EIH7 #=GS A0A1D6EIH7/262-370 OS Zea mays #=GS A0A1D6EIH7/262-370 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6EIH7/262-370 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6EIH9/263-370 AC A0A1D6EIH9 #=GS A0A1D6EIH9/263-370 OS Zea mays #=GS A0A1D6EIH9/263-370 DE RNA-binding (RRM/RBD/RNP motifs) family protein #=GS A0A1D6EIH9/263-370 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS K7LTU4/289-398 AC K7LTU4 #=GS K7LTU4/289-398 OS Glycine max #=GS K7LTU4/289-398 DE Uncharacterized protein #=GS K7LTU4/289-398 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS I1LKR2/286-394 AC I1LKR2 #=GS I1LKR2/286-394 OS Glycine max #=GS I1LKR2/286-394 DE Uncharacterized protein #=GS I1LKR2/286-394 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A3N7GC48/269-388 AC A0A3N7GC48 #=GS A0A3N7GC48/269-388 OS Populus trichocarpa #=GS A0A3N7GC48/269-388 DE Uncharacterized protein #=GS A0A3N7GC48/269-388 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS U5GJV7/274-382 AC U5GJV7 #=GS U5GJV7/274-382 OS Populus trichocarpa #=GS U5GJV7/274-382 DE Uncharacterized protein #=GS U5GJV7/274-382 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GF SQ 27 A0A0P0XYR2/296-401 -----NDSVSTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVPLPSSNGAP------------------- Q2QY16/271-378 ---KNNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVPLPSSNGAP------------------- B9GBS7/271-378 ---KNNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVPLPSSNGAP------------------- F6HHF8/287-411 ---KNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKITKVVLPPAKSGQEKSRIGFVHFAERSSAMKALKNTEKYEIDGQVLECSLAKPQA-DQKSVGGSNSQKSG--LLSSYPPRVGYGFVGGAYG I1JQ30/270-366 ----NSESSAISLVKSVYVKNLPENITQDRLKELFEHHGKITKVVLPSAKSGQEKSRFGFVHFAERSSAMKALKNTEKYEIDGQLLECSLAKPQA-NSQ--------KPA--------------------- B9HQ12/269-388 D-PKNADSSASSQVKALYVKNLPKTVTQDQLKKLFERHGKITKVVLPPAKSGQEKNRIGFVHFAERSSAMKALKDTEKYELDGQLVECALAKPQS-EQKAAGGSNLQNTG--LLPGYPPGVGYG------- K7UB59/254-372 --KNGGESASTAQVKSLYVKNLPKAVTQEQLKKLFEHLGEVTKVVIPPAKAGHE-NRYGFVHFKERSMAMKALEDTERFELDGQLLDCSLAKPLA-DKKDDTSA---PKGGPLLPSYTP-VGYGLMG---- A0A151TNT3/284-391 ---KNADSSATSQVKAVYVKNLPKNVTQEQLKKLFERHGKITKVVLPPTKSGQEKNRIGFVHFAERSNAMKALKSPERYELEGQILECSLAKPQS-DQKS-GGSHTQKPG--------PGL---------- V7AFR0/295-401 ---KNADSSAASQVKAVYVKNLPKNVTQEQLKKLFERHGKITKVVLPPAKSGQEKNRIGFVHFAERSNAMKALKNTERYELEGQMLECSLAKPQS-DQKS-GVSNTQKPG--------PG----------- C5Y449/282-387 --KNANEATSTAQVKSLYVKNIPKTVTQEQLKKLFEHVGEITKVVIPPAKSGHE-NRYGFVHFKERSMAMKALKNTERYELDGQLLDCSLAKPPA-DKKDDTVSAPTAKG--------------------- A0A0E0BF24/350-455 ---KNNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVPLPSSNG--------------------- A0A0E0MJE6/267-372 ---KNNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVSLPSSNG--------------------- I1R3U5/275-382 ---KNNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVPLPSSNGAP------------------- A0A0D3HHZ2/371-476 ---KNNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVPLPSSNG--------------------- A0A0E0R3Y0/350-455 ---KNNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVPLPSSNG--------------------- J3NB89/278-385 --PKNNDSASTSQVKSVYVKNLPKNVTQAQLKNLFERHGEITKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELAGQVLDCSLAKPAATDKKDERVSLPSSNGA-------------------- A0A0D3HHZ3/306-411 ---KNNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVPLPSSNG--------------------- A0A0E0BF25/284-390 --PKNNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHD-NRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVPLPSSNG--------------------- A0A1D6QHC5/260-372 DHKNASEATSTSQVKSLYVKNLPKTVTQEQLKKLFEHVGEITKVVIPPAKSGHE-NRYGFVHFKERSMVMKALKNTERYELDGQLLDCSPAKPPA-DKKDDTGSSPTAKGRPLPP---------------- A0A1D6QHD1/260-372 DHKNASEATSTSQVKSLYVKNLPKTVTQEQLKKLFEHVGEITKVVIPPAKSGHE-NRYGFVHFKERSMVMKALKNTERYELDGQLLDCSPAKPPA-DKKDDTGSSPTAKGRPLPP---------------- C4IYY4/260-372 DHKNASEATSTSQVKSLYVKNLPKTVTQEQLKKLFEHVGEITKVVIPPAKSGHE-NRYGFVHFKERSMVMKALKNTERYELDGQLLDCSPAKPPA-DKKDDTGSSPTAKGRPLPP---------------- A0A1D6EIH7/262-370 P-KNANEATSTAQVKSLYVKNLPKTVTQEQLKKLFEHVGEITKVVVPPAKSGHE-NRYGFVHFKERYMAMKALKNTERYELDGQLLDCSLAKPPA-DKKDSTVSTPTAKGGP------------------- A0A1D6EIH9/263-370 --KNANEATSTAQVKSLYVKNLPKTVTQEQLKKLFEHVGEITKVVVPPAKSGHE-NRYGFVHFKERYMAMKALKNTERYELDGQLLDCSLAKPPA-DKKDSTVSTPTAKGGP------------------- K7LTU4/289-398 D-PKNAESSAASQVKAVYVKNLPKNVTQEQLKKLFERHGKITKVVLPPAKSGQEKNRIGFVHFAERSNAMKALKNTERYELEGQLLECSLAKPQA-DQKS-GGSNTQKPG--------PGL---------- I1LKR2/286-394 --PKNAESSAASQVKAVYVKNLPKNVTQEQLKKLFERHGKITKVVLPPAKSGQEKNRIGFVHFAERSNAMKALKNTERYELEGQLLQCSLAKPQA-DQKS-GGSNTQKPG--------PGL---------- A0A3N7GC48/269-388 D-PKNADSSASSQVKALYVKNLPKTVTQDQLKKLFERHGKITKVVLPPAKSGQEKNRIGFVHFAERSSAMKALKDTEKYELDGQLVECALAKPQS-EQKAAGGSNLQNTG--LLPGYPPGVGYG------- U5GJV7/274-382 --PKNADSSTSSQVKAIYVKNLPKTVTQDQLKKLFERHGKITKVVLPPAKSGQEKNRIGFVHFAERSSAMKALKDTEKYELNGQSVECALAKPQS-EQKPAGGSNLQRAG--LL----------------- #=GC scorecons 00155577556789966999989868995899699965968699969867696717959999957985797996789789879957697799957076843445343448011000001000000000000 #=GC scorecons_70 ______**___*************_***_********_***_******_*_***_**_*****_***_****************_********_*_*_*__________*_____________________ #=GC scorecons_80 ______*____****__*******_***_***_***__*_*_***_**_*_*_*_**_*****_***_*****__*********_*_******___*_*__________*_____________________ #=GC scorecons_90 ____________***__*******_***_***_***__*_*_***_**___*____*_*****__*___*_**__**_**__**___*__***_____*__________*_____________________ //