# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/000494 #=GF DE 28 kDa ribonucleoprotein, chloroplastic #=GF AC 3.30.70.330/FF/000494 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 87.357 #=GS Q9VHP3/6-90 AC Q9VHP3 #=GS Q9VHP3/6-90 OS Drosophila melanogaster #=GS Q9VHP3/6-90 DE GEO11133p1 #=GS Q9VHP3/6-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS Q9VHP3/6-90 DR GO; GO:0003729; GO:0005515; #=GS Q0KHQ1/11-90 AC Q0KHQ1 #=GS Q0KHQ1/11-90 OS Drosophila melanogaster #=GS Q0KHQ1/11-90 DE GEO13361p1 #=GS Q0KHQ1/11-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS Q0KHQ1/11-90 DR GO; GO:0003729; #=GS A7SHQ6/2-105 AC A7SHQ6 #=GS A7SHQ6/2-105 OS Nematostella vectensis #=GS A7SHQ6/2-105 DE Predicted protein #=GS A7SHQ6/2-105 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; #=GS T1G5D7/6-82 AC T1G5D7 #=GS T1G5D7/6-82 OS Helobdella robusta #=GS T1G5D7/6-82 DE Uncharacterized protein #=GS T1G5D7/6-82 DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; #=GS F5HMW0/8-93 AC F5HMW0 #=GS F5HMW0/8-93 OS Anopheles gambiae #=GS F5HMW0/8-93 DE AGAP013048-PA #=GS F5HMW0/8-93 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS C3XQU4/2-79 AC C3XQU4 #=GS C3XQU4/2-79 OS Branchiostoma floridae #=GS C3XQU4/2-79 DE Uncharacterized protein #=GS C3XQU4/2-79 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS F7A225/1-71 AC F7A225 #=GS F7A225/1-71 OS Monodelphis domestica #=GS F7A225/1-71 DE Uncharacterized protein #=GS F7A225/1-71 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; #=GS B7PJB5/7-82 AC B7PJB5 #=GS B7PJB5/7-82 OS Ixodes scapularis #=GS B7PJB5/7-82 DE RNA binding protein, putative #=GS B7PJB5/7-82 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; #=GS V5HR55/7-83 AC V5HR55 #=GS V5HR55/7-83 OS Ixodes ricinus #=GS V5HR55/7-83 DE Putative rna-binding protein seb4 rrm superfamily #=GS V5HR55/7-83 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes ricinus; #=GS W5J8C9/14-95 AC W5J8C9 #=GS W5J8C9/14-95 OS Anopheles darlingi #=GS W5J8C9/14-95 DE Uncharacterized protein #=GS W5J8C9/14-95 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Nyssorhynchus; darlingi group; Anopheles darlingi; #=GS A0A2M3ZK60/14-95 AC A0A2M3ZK60 #=GS A0A2M3ZK60/14-95 OS Anopheles braziliensis #=GS A0A2M3ZK60/14-95 DE Putative rna recognition motif found in sra stem-loop-interacting rna-binding protein #=GS A0A2M3ZK60/14-95 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Nyssorhynchus; braziliensis group; Anopheles braziliensis; #=GS A0A0M4EXM1/10-90 AC A0A0M4EXM1 #=GS A0A0M4EXM1/10-90 OS Drosophila busckii #=GS A0A0M4EXM1/10-90 DE CG33714 #=GS A0A0M4EXM1/10-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; #=GS B4JLL9/8-88 AC B4JLL9 #=GS B4JLL9/8-88 OS Drosophila grimshawi #=GS B4JLL9/8-88 DE GH12889 #=GS B4JLL9/8-88 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; #=GS B4M1V7/8-88 AC B4M1V7 #=GS B4M1V7/8-88 OS Drosophila virilis #=GS B4M1V7/8-88 DE Uncharacterized protein #=GS B4M1V7/8-88 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; #=GS A0A1W4VRE7/8-92 AC A0A1W4VRE7 #=GS A0A1W4VRE7/8-92 OS Drosophila ficusphila #=GS A0A1W4VRE7/8-92 DE 28 kDa ribonucleoprotein, chloroplastic #=GS A0A1W4VRE7/8-92 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; #=GS B4PT78/8-91 AC B4PT78 #=GS B4PT78/8-91 OS Drosophila yakuba #=GS B4PT78/8-91 DE Uncharacterized protein #=GS B4PT78/8-91 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; #=GS B4HL43/6-90 AC B4HL43 #=GS B4HL43/6-90 OS Drosophila sechellia #=GS B4HL43/6-90 DE GM23745 #=GS B4HL43/6-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; #=GS B4QY06/6-90 AC B4QY06 #=GS B4QY06/6-90 OS Drosophila simulans #=GS B4QY06/6-90 DE GD18556 #=GS B4QY06/6-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GS B4R3R0/11-90 AC B4R3R0 #=GS B4R3R0/11-90 OS Drosophila simulans #=GS B4R3R0/11-90 DE GD15500 #=GS B4R3R0/11-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GS A0A1W4VXE1/11-90 AC A0A1W4VXE1 #=GS A0A1W4VXE1/11-90 OS Drosophila ficusphila #=GS A0A1W4VXE1/11-90 DE SRA stem-loop-interacting RNA-binding protein, mitochondrial #=GS A0A1W4VXE1/11-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; #=GS B4GWL9/9-88 AC B4GWL9 #=GS B4GWL9/9-88 OS Drosophila persimilis #=GS B4GWL9/9-88 DE GL16571 #=GS B4GWL9/9-88 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; #=GS B3NYC9/11-90 AC B3NYC9 #=GS B3NYC9/11-90 OS Drosophila erecta #=GS B3NYC9/11-90 DE Uncharacterized protein #=GS B3NYC9/11-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; #=GS B4PZ25/11-90 AC B4PZ25 #=GS B4PZ25/11-90 OS Drosophila yakuba #=GS B4PZ25/11-90 DE Uncharacterized protein #=GS B4PZ25/11-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; #=GS B5DLS2/72-151 AC B5DLS2 #=GS B5DLS2/72-151 OS Drosophila pseudoobscura pseudoobscura #=GS B5DLS2/72-151 DE Uncharacterized protein #=GS B5DLS2/72-151 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; #=GS A0A3B0K9R3/9-88 AC A0A3B0K9R3 #=GS A0A3B0K9R3/9-88 OS Drosophila guanche #=GS A0A3B0K9R3/9-88 DE Blast:Heterogeneous nuclear ribonucleoprotein A/B #=GS A0A3B0K9R3/9-88 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; #=GS B4I6G3/11-90 AC B4I6G3 #=GS B4I6G3/11-90 OS Drosophila sechellia #=GS B4I6G3/11-90 DE GM22629 #=GS B4I6G3/11-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; #=GS B4N1H9/7-88 AC B4N1H9 #=GS B4N1H9/7-88 OS Drosophila willistoni #=GS B4N1H9/7-88 DE Uncharacterized protein #=GS B4N1H9/7-88 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; #=GS B3N0G4/11-90 AC B3N0G4 #=GS B3N0G4/11-90 OS Drosophila ananassae #=GS B3N0G4/11-90 DE Uncharacterized protein #=GS B3N0G4/11-90 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; #=GS B4L8M9/8-88 AC B4L8M9 #=GS B4L8M9/8-88 OS Drosophila mojavensis #=GS B4L8M9/8-88 DE Uncharacterized protein #=GS B4L8M9/8-88 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; #=GF SQ 29 Q9VHP3/6-90 ----VRSSYKLFVGNLPWTIGSKELRTYFSKYGHVANAEVVFDRQLGLSKHYGFVVFSQRDAFNSASNQNTHFLDGRVLTVQRANESPQ---------------- Q0KHQ1/11-90 ----GKSVHRIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTALEKIENEQKHILEGNYLNIQKS--------------------- A7SHQ6/2-105 A-SARNIANKLFVAKLPWTACRESLTEHFKQYGQILSSKVMFDLKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQKVFVELMTTPPAGSSESRNPRRNRQNER T1G5D7/6-82 -----LKSYKLFVGNLSWTVSPAELRNYFSKYGQVKQSRIIFSK-SGWSRGYGFVTFNRENDFKSVFNQKDHFLGGHMVKLAL---------------------- F5HMW0/8-93 ASTIARGVQKLFVGNLPWTVSTKELKTYFSKYGHVHSTNVIYDKSTGISRGYGFIVFSTREGFTNATNNRLHVLEGRVLDLQPASS------------------- C3XQU4/2-79 A-SATARNLQLFVGRVAWTVGQKELKEYFTQFGSVKKVRLPWNKDTGFHKNYAIVQYRTEEGMNNALGRDTHLLEGSKV-------------------------- F7A225/1-71 ---------TVFVNRIPWTAAANEIKQHFSQFGTIRKCFLPFEKETGFHKGFCWIGFSSEEELQRTLQQENHFIDGVKVR------------------------- B7PJB5/7-82 --------LKVFVGNLSWTVGRRELRDYFSQFGYVTSSNVVFNKENGMSKGFGFVVFGNRDGFMNATKPQQHIFEGNTVSLAVT--------------------- V5HR55/7-83 --------LKVFVGNLSWTVGRRELRDYFSQFGYVTSSNVVFNKETGMSKGFGFVVFGNRDGFMNATKPQQHIFEGNTLTVHPTH-------------------- W5J8C9/14-95 ----ARGVQKLFVGNLPWTISTKELKSYFSKYGHVNSTNVIYDKTTGISRGYGFIVFSTREGFTNATNNRLHVLEGRVLDIQPATS------------------- A0A2M3ZK60/14-95 ----ARGVQKLFVGNLPWTISTKELKSYFSKYGHVNSTNVIYDKTTGISRGYGFIVFSTREGFTNATNNRLHVLEGRVLDIQPATS------------------- A0A0M4EXM1/10-90 ---VGKSVHRIFVGNLPWTVGHQELRGYFKEFGRVINANVIFDKKTGCSKGYGFVSFNSLQALEKIENEQKHVLEGNYLNIQKS--------------------- B4JLL9/8-88 ---VGKSVHRIFVGNLPWTVGHQELRGYFKEFGRVLNANVIFDRKTGCSKGYGFVSFNSLQALEKIENEQKHILEGNYLNIQKS--------------------- B4M1V7/8-88 ---VGKSVHRIFVGNLPWTVGHQELRGYFKEFGRVVNANVIFDKKTGCSKGYGFVSFNSLQALEKIENEQKHILEGNYLNIHKS--------------------- A0A1W4VRE7/8-92 ------SSYKLFVGNLPWTIGNKELKIYFSKYGHVANAEVVFDRQVGLSKHYGFVVFSQRDAFNSACNQNTHFLEGRVLTVQRANESPQGQ-------------- B4PT78/8-91 ------SSYKLFVGNLPWTIGSKELRTYFSKYGHVANAEVVFDRQLGLSKHYGFVVFSQRDAFNSASNQNTHFLEGRVLTVQQANESPQS--------------- B4HL43/6-90 ----VRSSYKLFVGNLPWTIGSKELRTYFSKYGHVANAEVVFDRQLGLSKHYGFVVFSQRDAFNSASNQNTHFLDGRVLTVQRANESPQ---------------- B4QY06/6-90 ----VRSSYKLFVGNLPWTIGSKELRTYFSKYGHVANAEVVFDRQLGLSKHYGFVVFSQRDAFNSASNQNTHFLDGRVLTVQRANESPQ---------------- B4R3R0/11-90 ----GKSVHRIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTALEKIENEQKHILEGKYLNIQKS--------------------- A0A1W4VXE1/11-90 ----GKSVHRIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLAALEKIENEQKHILEGNYLNIQKS--------------------- B4GWL9/9-88 ----GKSVHRIFVGNLPWTVGHQELRGYFKEFGRVLSANVIFDKKTGCSKGYGFVSFNSLTALEKIENEQKHILEGHHLNIQKS--------------------- B3NYC9/11-90 ----GKSVHRIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLAALEKIENEQKHILEGNYLNIQKS--------------------- B4PZ25/11-90 ----GKSVHRIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLAALEKIENEQKHILEGNYLNIQKS--------------------- B5DLS2/72-151 ----GKSVHRIFVGNLPWTVGHQELRGYFKEFGRVLSANVIFDKKTGCSKGYGFVSFNSLTALEKIENEQKHILEGHHLNIQKS--------------------- A0A3B0K9R3/9-88 ----GKSVHRIFVGNLPWTVGHQELRGYFKEFGRVLSANVIFDKKTGCSKGYGFVSFNSLTALEKIENEQKHILEGHYLNIQKS--------------------- B4I6G3/11-90 ----GKSVHRIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTALEKIENEQKHILEGNYLNIQKS--------------------- B4N1H9/7-88 --KVSKSVHRIFVGNLPWTVGHQELRGYFKEFGRVLSANVIFDKKTGCSKGYGFVSFNSLTALEKIENEQKHILEGNYLNIQKS--------------------- B3N0G4/11-90 ----GKSVHRIFVGNLPWTVGHQELRGYFKEFGRVISANVIFDKRTGCSKGYGFVSFNSLTALEKIENEQRHILEGNYLNIQKS--------------------- B4L8M9/8-88 ---VGKSVHRIFVGNLPWTVGHQELRGYFKEFGRVLNANVIFDKKTGCSKGYGFVSFNSLQALEKIENEQKHILEGNYLNIQKS--------------------- #=GC scorecons 000023434669977779966458864894579483555757664593775877748543455445364539577943735533000000000000000000000 #=GC scorecons_70 _________*_**********__***_**__**_*____*_***__*_**_****_*__________*___*_***__*__________________________ #=GC scorecons_80 ___________***_****____**__**__**_*____*_*____*_**_****_*______________*_***_____________________________ #=GC scorecons_90 ___________**____**____**__**___*_*___________*____*____*______________*___*_____________________________ //