# STOCKHOLM 1.0
#=GF ID 3.30.420.10/FF/000175
#=GF DE RNA exonuclease 5
#=GF AC 3.30.420.10/FF/000175
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 86.808
#=GS Q8SWW0/720-924       AC Q8SWW0
#=GS Q8SWW0/720-924       OS Drosophila melanogaster
#=GS Q8SWW0/720-924       DE LD37466p
#=GS Q8SWW0/720-924       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q8SWW0/720-924       DR GO; GO:0000289; GO:0031251; 
#=GS A0A1Z1GHX5/220-349   AC A0A1Z1GHX5
#=GS A0A1Z1GHX5/220-349   OS Mus musculus
#=GS A0A1Z1GHX5/220-349   DE RNA exonuclease 5
#=GS A0A1Z1GHX5/220-349   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS A0A1Z1GHX5/220-349   DR GO; GO:0005730; 
#=GS A0A1Z1GHX4/220-350   AC A0A1Z1GHX4
#=GS A0A1Z1GHX4/220-350   OS Mus musculus
#=GS A0A1Z1GHX4/220-350   DE RNA exonuclease 5 short isoform
#=GS A0A1Z1GHX4/220-350   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS A0A1Z1GHX4/220-350   DR GO; GO:0005730; 
#=GS Q0TVD3/765-929       AC Q0TVD3
#=GS Q0TVD3/765-929       OS Parastagonospora nodorum SN15
#=GS Q0TVD3/765-929       DE Uncharacterized protein
#=GS Q0TVD3/765-929       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum; 
#=GS H3DYU7/877-1065      AC H3DYU7
#=GS H3DYU7/877-1065      OS Pristionchus pacificus
#=GS H3DYU7/877-1065      DE Uncharacterized protein
#=GS H3DYU7/877-1065      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS C3YSK7/1075-1279     AC C3YSK7
#=GS C3YSK7/1075-1279     OS Branchiostoma floridae
#=GS C3YSK7/1075-1279     DE PAN2-PAN3 deadenylation complex catalytic subunit PAN2
#=GS C3YSK7/1075-1279     DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS H2M1D1/219-383       AC H2M1D1
#=GS H2M1D1/219-383       OS Oryzias latipes
#=GS H2M1D1/219-383       DE Uncharacterized protein
#=GS H2M1D1/219-383       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3B3CL30/218-384   AC A0A3B3CL30
#=GS A0A3B3CL30/218-384   OS Oryzias melastigma
#=GS A0A3B3CL30/218-384   DE Uncharacterized protein
#=GS A0A3B3CL30/218-384   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias melastigma; 
#=GS A0A3P9M310/219-383   AC A0A3P9M310
#=GS A0A3P9M310/219-383   OS Oryzias latipes
#=GS A0A3P9M310/219-383   DE RNA exonuclease 5
#=GS A0A3P9M310/219-383   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A2A6BQI3/900-1088  AC A0A2A6BQI3
#=GS A0A2A6BQI3/900-1088  OS Pristionchus pacificus
#=GS A0A2A6BQI3/900-1088  DE Panl-2
#=GS A0A2A6BQI3/900-1088  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GF SQ 10
Q8SWW0/720-924               -QSGDLVAMDAEFVTLNPEENEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFMDDYIS--TQEKVVDYLTQFSGIKPGDLDANFSKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQIIDTVHLFHMPHHRMVS--LRFLAWHFLGTKIQSE---THDSIEDARTTLQLYKHYLKLQEEK---KFANALKNLYERGKQLQ----
A0A1Z1GHX5/220-349           -DSSPLFGLDCEVCLTSMG-----------------KELTRISLVTEGGY----CLIDELVK--PDLKILDYLTSFTGITKEILNPV-----TTKLKDVQKLLRELLPPDAVLVGHCLDLDLRVLKIAEFN--L--EALAANQEQGDK--------------------EEAAHMSVLKCLESM-------------------------------------
A0A1Z1GHX4/220-350           -DSSPLFGLDCEVCLTSMG-----------------KELTRISLVTEGGY----CLIDELVK--PDLKILDYLTSFTGITKEILNPV-----TTKLKDVQKLLRELLPPDAVLVGHCLDLDLRVLKIAEFN--L--EALAANQEQGDK--------------------EEAAHMSVLKCLESMG------------------------------------
Q0TVD3/765-929               TAGRNVISVDCEMCKAEND----------------QHVLTRVSLLGWDGE----VVMDRLVK--PDVAIKDYLTQYSGITAAMLEHV-----TTTLSDIQKELLRLVTPRTILVGHSLNSDLNALKLTHPF--LVDTGILFPHPRGPPYKQSLKWLAQKYLHREVQKGSR-GHDSVEDARTALDLVKQKC-------------------EKGPS------
H3DYU7/877-1065              -KKGDIVGIDAEFISMSKD-------GSK-------KCVGRVSVVDASGEQ---IIMDDYIVGIDGEIVHDYLTQYSGIMEHDLCRIRSTKHLTTLKASYVKLLHLIERGVIFVGHALFNDFSMLNIHVPNDQVRDTVQLFRLPQQRLIS--LQFLAFHLLDLKIQES---THDSVEDARVSLQLFRKWQQLQEAG---TLDSTIRWLYEEGKVA-----
C3YSK7/1075-1279             -KDGDLVALDAEFVTLNQEEAELHSDGTRSTIKPSHMSVARITVIRGQGPQEGTPFIDDYIS--TQEQVVDYLTKFSGIKPGDLDANISSKHLTTLKSTYLKLRYLIDRGVKMVGHGLKKDFRVINLFVPKDQIVDTVLLFHLTNKRMMS--LRFLAWYFLKLRIQSD---THDSIEDARTALQLHKKYKQLKDEQEPDEFHKTLRKMYEEGR-------
H2M1D1/219-383               --GSPLFGLDCEMCLTEKG-----------------YELTRVSLVDSCGK----CIMDDLVK--PQNRVLNYLTKFSGITAAMLRPI-----KTTLKEVQHKLRKLLPPDAVLVGHSLNNDLAALKLIHPH--VIDTSLLYKRELGQKFK--LKVLADVVLDRKIQTEERKGHNPIEDAVAALELAQYFI-------------------ERGPCQVVE--
A0A3B3CL30/218-384           --CSPLYGLDCEMCLTEKG-----------------YELTRVSLVDSCGK----CIMDELVK--PQNRVLNYLTKFSGITAAMLRPI-----TTTLREVQHKLRELLPGDAVLVGHSLNNDLAALKVIHPH--VIDTSLLYKRELGQKFK--LKVLAETILDKKIQTEEREGHDPIEDAAAALELAQYFI-------------------ERGPCQVVELH
A0A3P9M310/219-383           --GSPLFGLDCEMCLTEKG-----------------YELTRVSLVDSCGK----CIMDDLVK--PQNRVLNYLTKFSGITAAMLRPI-----KTTLKEVQHKLRKLLPPDAVLVGHSLNNDLAALKLIHPH--VIDTSLLYKRELGQKFK--LKVLADVVLDRKIQTEERKGHNPIEDAVAALELAQYFI-------------------ERGPCQVVE--
A0A2A6BQI3/900-1088          -KKGDIVGIDAEFISMSKD-------GSK-------KCVGRVSVVDASGEQ---IIMDDYIVGIDGEIVHDYLTQYSGIMEHDLCRIRSTKHLTTLKASYVKLLHLIERGVIFVGHALFNDFSMLNIHVPNDQVRDTVQLFRLPQQRLIS--LQFLAFHLLDLKIQES---THDSVEDARVSLQLFRKWQQLQEAG---TLDSTIRWLYEEGKVA-----
#=GC scorecons               0235464669594434435000000010000000003365977564339300003569657400443374699947699433493450101049597345359439544555699949349645766336411525644654343443230053255122522345222105946756634573513221010100000000000101153521100000
#=GC scorecons_70            _____*___*_*__________________________*_***_*___*_______**__*_______*_****_****____*_________*_**_____*__*_______***_*__**__*___________*__*________________________________*_**_**___*_____________________________________
#=GC scorecons_80            _________*_*____________________________*_*_____*________*__________*__***_*_**____*_________*_*______*__*_______***_*__*___________________________________________________*_________*_____________________________________
#=GC scorecons_90            _________*_*____________________________*_______*________*_____________***___**____*_________*_*______*__*_______***_*__*___________________________________________________*_______________________________________________
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