# STOCKHOLM 1.0 #=GF ID 2.70.170.10/FF/000052 #=GF DE Ligand-Gated ion Channel #=GF AC 2.70.170.10/FF/000052 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 59.834 #=GS P90876/250-454 AC P90876 #=GS P90876/250-454 OS Caenorhabditis elegans #=GS P90876/250-454 DE Ligand-Gated ion Channel #=GS P90876/250-454 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A1N7SZF8/666-869 AC A0A1N7SZF8 #=GS A0A1N7SZF8/666-869 OS Caenorhabditis elegans #=GS A0A1N7SZF8/666-869 DE Ligand-Gated ion Channel #=GS A0A1N7SZF8/666-869 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A1N7SYR3/537-740 AC A0A1N7SYR3 #=GS A0A1N7SYR3/537-740 OS Caenorhabditis elegans #=GS A0A1N7SYR3/537-740 DE Ligand-Gated ion Channel #=GS A0A1N7SYR3/537-740 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A1N7SYW0/678-881 AC A0A1N7SYW0 #=GS A0A1N7SYW0/678-881 OS Caenorhabditis elegans #=GS A0A1N7SYW0/678-881 DE Ligand-Gated ion Channel #=GS A0A1N7SYW0/678-881 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A016UDZ7/604-807 AC A0A016UDZ7 #=GS A0A016UDZ7/604-807 OS Ancylostoma ceylanicum #=GS A0A016UDZ7/604-807 DE Uncharacterized protein #=GS A0A016UDZ7/604-807 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS H3F2C9/621-824 AC H3F2C9 #=GS H3F2C9/621-824 OS Pristionchus pacificus #=GS H3F2C9/621-824 DE Uncharacterized protein #=GS H3F2C9/621-824 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A2A2J543/453-656 AC A0A2A2J543 #=GS A0A2A2J543/453-656 OS Diploscapter pachys #=GS A0A2A2J543/453-656 DE Uncharacterized protein #=GS A0A2A2J543/453-656 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Diploscapter; Diploscapter pachys; #=GS G0NH29/225-429 AC G0NH29 #=GS G0NH29/225-429 OS Caenorhabditis brenneri #=GS G0NH29/225-429 DE Uncharacterized protein #=GS G0NH29/225-429 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS E3LPP3/250-455 AC E3LPP3 #=GS E3LPP3/250-455 OS Caenorhabditis remanei #=GS E3LPP3/250-455 DE CRE-LGC-44 protein #=GS E3LPP3/250-455 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A0A261BXP9/250-455 AC A0A261BXP9 #=GS A0A261BXP9/250-455 OS Caenorhabditis latens #=GS A0A261BXP9/250-455 DE Uncharacterized protein #=GS A0A261BXP9/250-455 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; #=GS A8Y496/251-455 AC A8Y496 #=GS A8Y496/251-455 OS Caenorhabditis briggsae #=GS A8Y496/251-455 DE Protein CBR-LGC-44 #=GS A8Y496/251-455 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A2G5TGY2/251-455 AC A0A2G5TGY2 #=GS A0A2G5TGY2/251-455 OS Caenorhabditis nigoni #=GS A0A2G5TGY2/251-455 DE Uncharacterized protein #=GS A0A2G5TGY2/251-455 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS A0A1I7UAR1/251-455 AC A0A1I7UAR1 #=GS A0A1I7UAR1/251-455 OS Caenorhabditis tropicalis #=GS A0A1I7UAR1/251-455 DE Uncharacterized protein #=GS A0A1I7UAR1/251-455 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS A8XZX0/1-162 AC A8XZX0 #=GS A8XZX0/1-162 OS Caenorhabditis briggsae #=GS A8XZX0/1-162 DE Protein CBR-LGC-45 #=GS A8XZX0/1-162 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A2A2J552/280-483 AC A0A2A2J552 #=GS A0A2A2J552/280-483 OS Diploscapter pachys #=GS A0A2A2J552/280-483 DE Uncharacterized protein #=GS A0A2A2J552/280-483 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Diploscapter; Diploscapter pachys; #=GF SQ 15 P90876/250-454 -ILPFLRKMEYDARQPPSLHVDDTVTVKVGIAVQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDLSRPILVNDYTFLKMIWRPDPIFTNSKYSTFHKVTYLNFYLFIFPDGKIFMDMRVYLKPTAAQIVLCKYPHDNPAVSLKISSMGFTQDVVKLEWFSDTNDAIWIEKNVKIPELSIRHLHPDTCNGVRKSGVYSCLEAKFYMH A0A1N7SZF8/666-869 -ILPVLNKNQYDPFSAPIVFQGSAVVVRFGIYIESMSNFQTSTMDYDMDIYLMMSWRDARLVNPYDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKP-SCNLILCKYPHDKQTCDLLIKSFAYPVETVRFEWFTRRKDAIDKNPDVKLPELYIDRYETTTCPNERKSGAFSCLRAVFRLK A0A1N7SYR3/537-740 -ILPVLNKNQYDPFSAPIVFQGSAVVVRFGIYIESMSNFQTSTMDYDMDIYLMMSWRDARLVNPYDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKP-SCNLILCKYPHDKQTCDLLIKSFAYPVETVRFEWFTRRKDAIDKNPDVKLPELYIDRYETTTCPNERKSGAFSCLRAVFRLK A0A1N7SYW0/678-881 -ILPVLNKNQYDPFSAPIVFQGSAVVVRFGIYIESMSNFQTSTMDYDMDIYLMMSWRDARLVNPYDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKP-SCNLILCKYPHDKQTCDLLIKSFAYPVETVRFEWFTRRKDAIDKNPDVKLPELYIDRYETTTCPNERKSGAFSCLRAVFRLK A0A016UDZ7/604-807 -ILPVLNKNQYDPFSAPIVFQGSAVIVRFGIYIESMSNFQTSTMDYDMDIYLMMSWRDARLVNPYDKPILVKEEEILDKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKP-SCNLILCKYPHDKQTCDLLIKSFAYPVETVRFEWFTRRVDAIDKNPDVKLPELYIDRYEPTVCTKARKSGAFSCLRAVFRLK H3F2C9/621-824 -ILPVLSKNQYDPYSAPIVFEGSAVTVRFGVYIESMSNFQTSTMDYDMDIYLLMAWRDARLFNPYDKPILVKEEEVLEKIWRPDPFFANAKEAEYHEVTFLNFLMRIFPDGLVLYETRIRLKT-ACSLILCKYPHDKQTCELQIKSFAYPLETVRFEWFTKKENAIDKNPDVKLPELYIDRYEPTTCDKTRKSGSFACLRAVFRLK A0A2A2J543/453-656 -ILPVLNKNKYDPFSAPIVFQGSAVVVRFGIYIESMSNFQTTTMDYDMDIYLLMSWRDARLVNRYDQPILVKEEEILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIYSDGLVLYETRVKITP-SCNLILCKYPHDKQTCDLMIKSFAYPVETVRFEWFTRRKDAIDKNPDVKLPELYIDRYEPTTCPSTRKSGEFSCLRAVFRLK G0NH29/225-429 -ILPFLRKIEYDARQPPTLHVDDTVTVKVGISVQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDLSRPILVNDYTFLKMIWRPDPIFTNAKYSTFHKVTYLNFYLFIFPDGKIFMDMRVYLKPTAAQIVLCKYPHDNPAVSLKISSMGFTQDVVKLEWFSNYNDAIRIEKNVRIPELSIRHLHPDTCNGVRKSGVYSCLEAKFYMH E3LPP3/250-455 TILPFLKKIEYDARQPPTLHVDDTVTVKVGISVQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDLSRPILVNDYTFLKMIWRPDPIFTNAKYSTFHKVTYLNFYLFIFPDGKVFMDMRVYLKPTAAQIVLCKYPHDNPAVSLKISSMGFTQDVVKLEWFSNSNDAIRIEKNVRIPELSIRNLHPDTCNGVRKSGVYSCLEAKFYMH A0A261BXP9/250-455 TILPFLKKIEYDARQPPTLHVDDTVTVKVGMSVQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDLSRPILVNDYTFLKMIWRPDPIFTNAKYSTFHKVTYLNFYLFIFPDGKVFMDMRVYLKPTAAQIVLCKYPHDNPAVSLKISSMGFTQNVVKLEWFSNSNDAIRIEKNVRIPELSIRNLHPDTCNGVRKSGVYSCLEAKFYMH A8Y496/251-455 -ILPFLRKIEYDARQPPTLHVDDTVTVKVGISVQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDLSRPILVNDYTFLKMIWRPDPIFTNAKYSTFHKVTYLNFYLFIFPDGKIFMDMRVYLKPTAAQIVLCKYPHDNPAVSLKISSMGFTQDVVKLEWFSNSNDAIRIEKNVRIPELSIRHLHPDICNGVRKSGVYSCLEAKFYMH A0A2G5TGY2/251-455 -ILPFLRKIEYDARQPPTLHVDDTVTVKVGISVQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDLSRPILVNDYTFLKMIWRPDPIFTNAKYSTFHKVTYLNFYLFIFPDGKIFMDMRVYLKPTAAQIVLCKYPHDNPAVSLKISSMGFTQDVVKLEWFSNTNDAIRIEKNVRIPELSIRHLHPDTCNGVRKSGVYSCLEAKFYMH A0A1I7UAR1/251-455 -ILPFLRKIEYDARQPPTLHVDDTVTVKVGISIQSMSNFELSTMDYDLDAWVRMSWIDPRLRHDLSRPILVNDYTFLKMIWRPDPIFTNAKYSTFHKVTYLNFYLFIFPDGKVFMDMRVYLKPTAAQIVLCKYPHDNPAVSLKISSMGFTQDVVRLEWFSNYNDAIRIEKNVRIPELSIRHLHPDTCNGVRKSGVYSCLEAKFYMH A8XZX0/1-162 -------------------------------------------QDYDMDIYLMMSWRDARLVNPYDKPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKP-SCNLILCKYPHDKQTCDLLIKSFAYPVETVRFEWFTRRKDAIDKNPDVKLPELYIDRYETTTCANERKSGAFSCLRAVFRLK A0A2A2J552/280-483 -ILPVLNKNKYDPFSAPIVFQGSAVVVRFGIYIESMSNFQTTTMDYDMDIYLLMSWRDARLVNRYDQPILVKEEEILEKIWRPDPFFANAKEAEFHEVTFLNFLMRIYSDGLVLYETRVKITP-SCNLILCKYPHDKQTCDLMIKSFAYPVETVRFEWFTRRKDAIDKNPDVKLPELYIDRYEPTTCPSTRKSGEFSCLRAVFRLK #=GC scorecons 07774737347743447454344574754763557777754677999695564989496994645569999674459559999995969894658969979995649879947647598467816556799999996565594959567646597699965458994465697699959555565794449999478995949566 #=GC scorecons_70 _***_*_*__**____*_______*_*__*____*****___*******__*_***_*_**_____*****_*___*__******_*****___**_******_*_*****_**_*_**_***____*********__*__*_*_*__*__*_******____***____*******_*____*_**___****_****_*_*_*_ #=GC scorecons_80 ___________________________________________****_*____***_*_**______****_____*__******_*_***___**_******___*****_*____**__**______*******_____*_*_*__*____*__***____***_____*__***_*______**___****_****_*_*___ #=GC scorecons_90 ____________________________________________***_*____***_*_**______****_____*__******_*_***___**_**_***___**_**______**___*______*******_____*_*_*_______*__***____***_____*__***_*_______*___****__***_*_*___ //