# STOCKHOLM 1.0
#=GF ID 2.10.25.10/FF/000614
#=GF DE Neurogenic locus notch protein 1
#=GF AC 2.10.25.10/FF/000614
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 74.988
#=GS Q61982/1003-1038      AC Q61982
#=GS Q61982/1003-1038      OS Mus musculus
#=GS Q61982/1003-1038      DE Neurogenic locus notch homolog protein 3
#=GS Q61982/1003-1038      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q61982/1003-1038      DR GO; GO:0000122; GO:0005515; GO:0005654; GO:0005829; GO:0005886; GO:0005887; GO:0006355; GO:0007219; GO:0015629; GO:0019899; GO:0030900; GO:0038023; GO:0042802; GO:0043235; GO:0045596; GO:0045665; GO:0045944; GO:0048661; GO:0048663; GO:0048844; GO:0072104; 
#=GS Q9UM47/1002-1037      AC Q9UM47
#=GS Q9UM47/1002-1037      OS Homo sapiens
#=GS Q9UM47/1002-1037      DE Neurogenic locus notch homolog protein 3
#=GS Q9UM47/1002-1037      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q9UM47/1002-1037      DR GO; GO:0000139; GO:0005515; GO:0005576; GO:0005654; GO:0005789; GO:0005829; GO:0005886; GO:0006367; GO:0007219; GO:0007221; GO:0015629; GO:0038023; GO:0042802; GO:0043235; GO:0045296; GO:0045746; 
#=GS F1QZF2/1015-1053      AC F1QZF2
#=GS F1QZF2/1015-1053      OS Danio rerio
#=GS F1QZF2/1015-1053      DE Notch receptor 3
#=GS F1QZF2/1015-1053      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS F1QZF2/1015-1053      DR GO; GO:0001840; GO:0001889; GO:0002244; GO:0007219; GO:0014003; GO:0021514; GO:0021654; GO:0035019; GO:0035633; GO:0035907; GO:0043114; GO:0048259; GO:0048514; GO:0048709; GO:0048793; GO:0048936; GO:0050768; GO:0060842; GO:0061056; GO:0097150; GO:0098725; 
#=GS Q9R172/1003-1038      AC Q9R172
#=GS Q9R172/1003-1038      OS Rattus norvegicus
#=GS Q9R172/1003-1038      DE Neurogenic locus notch homolog protein 3
#=GS Q9R172/1003-1038      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS Q9R172/1003-1038      DR GO; GO:0005886; GO:0006355; GO:0007219; GO:0038023; GO:0042060; GO:0042246; 
#=GS I3LB93/1001-1039      AC I3LB93
#=GS I3LB93/1001-1039      OS Sus scrofa
#=GS I3LB93/1001-1039      DE Uncharacterized protein
#=GS I3LB93/1001-1039      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; 
#=GS F6WZX4/1149-1185      AC F6WZX4
#=GS F6WZX4/1149-1185      OS Equus caballus
#=GS F6WZX4/1149-1185      DE Notch receptor 3
#=GS F6WZX4/1149-1185      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS H2LKI3/991-1034       AC H2LKI3
#=GS H2LKI3/991-1034       OS Oryzias latipes
#=GS H2LKI3/991-1034       DE Uncharacterized protein
#=GS H2LKI3/991-1034       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3Q0DCA7/1002-1038  AC A0A3Q0DCA7
#=GS A0A3Q0DCA7/1002-1038  OS Mesocricetus auratus
#=GS A0A3Q0DCA7/1002-1038  DE neurogenic locus notch homolog protein 3
#=GS A0A3Q0DCA7/1002-1038  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Mesocricetus; Mesocricetus auratus; 
#=GS A0A3Q2YJE9/997-1042   AC A0A3Q2YJE9
#=GS A0A3Q2YJE9/997-1042   OS Hippocampus comes
#=GS A0A3Q2YJE9/997-1042   DE Uncharacterized protein
#=GS A0A3Q2YJE9/997-1042   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampinae; Hippocampus; Hippocampus comes; 
#=GS F7GNQ0/1000-1035      AC F7GNQ0
#=GS F7GNQ0/1000-1035      OS Callithrix jacchus
#=GS F7GNQ0/1000-1035      DE Notch 3
#=GS F7GNQ0/1000-1035      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS A0A3Q2P3Q3/1024-1068  AC A0A3Q2P3Q3
#=GS A0A3Q2P3Q3/1024-1068  OS Fundulus heteroclitus
#=GS A0A3Q2P3Q3/1024-1068  DE Uncharacterized protein
#=GS A0A3Q2P3Q3/1024-1068  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; 
#=GS A0A2K6RMB1/988-1023   AC A0A2K6RMB1
#=GS A0A2K6RMB1/988-1023   OS Rhinopithecus roxellana
#=GS A0A2K6RMB1/988-1023   DE Uncharacterized protein
#=GS A0A2K6RMB1/988-1023   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; 
#=GS A0A2K5CBV5/1001-1036  AC A0A2K5CBV5
#=GS A0A2K5CBV5/1001-1036  OS Aotus nancymaae
#=GS A0A2K5CBV5/1001-1036  DE Uncharacterized protein
#=GS A0A2K5CBV5/1001-1036  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS A0A2K5SFH3/1002-1037  AC A0A2K5SFH3
#=GS A0A2K5SFH3/1002-1037  OS Cebus capucinus imitator
#=GS A0A2K5SFH3/1002-1037  DE Uncharacterized protein
#=GS A0A2K5SFH3/1002-1037  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS A0A3Q2DIC6/1024-1068  AC A0A3Q2DIC6
#=GS A0A3Q2DIC6/1024-1068  OS Cyprinodon variegatus
#=GS A0A3Q2DIC6/1024-1068  DE Uncharacterized protein
#=GS A0A3Q2DIC6/1024-1068  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Cyprinodontidae; Cyprinodontinae; Cyprinodontini; Cyprinodon; Cyprinodon variegatus; 
#=GS A0A2K5WUB8/962-997    AC A0A2K5WUB8
#=GS A0A2K5WUB8/962-997    OS Macaca fascicularis
#=GS A0A2K5WUB8/962-997    DE Uncharacterized protein
#=GS A0A2K5WUB8/962-997    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS H2NXW0/1002-1037      AC H2NXW0
#=GS H2NXW0/1002-1037      OS Pongo abelii
#=GS H2NXW0/1002-1037      DE NOTCH3 isoform 1
#=GS H2NXW0/1002-1037      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS G3QIL5/998-1033       AC G3QIL5
#=GS G3QIL5/998-1033       OS Gorilla gorilla gorilla
#=GS G3QIL5/998-1033       DE Notch 3
#=GS G3QIL5/998-1033       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS H2QFL8/1002-1037      AC H2QFL8
#=GS H2QFL8/1002-1037      OS Pan troglodytes
#=GS H2QFL8/1002-1037      DE NOTCH3 isoform 1
#=GS H2QFL8/1002-1037      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2K5NWU2/1002-1037  AC A0A2K5NWU2
#=GS A0A2K5NWU2/1002-1037  OS Cercocebus atys
#=GS A0A2K5NWU2/1002-1037  DE Uncharacterized protein
#=GS A0A2K5NWU2/1002-1037  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; 
#=GS Q800E4/1015-1053      AC Q800E4
#=GS Q800E4/1015-1053      OS Danio rerio
#=GS Q800E4/1015-1053      DE Notch3
#=GS Q800E4/1015-1053      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q800E4/1015-1053      DR GO; GO:0001840; GO:0001889; GO:0002244; GO:0007219; GO:0014003; GO:0021514; GO:0021654; GO:0035019; GO:0035633; GO:0035907; GO:0043114; GO:0048259; GO:0048514; GO:0048709; GO:0048793; GO:0048936; GO:0050768; GO:0060842; GO:0061056; GO:0097150; GO:0098725; 
#=GS F1LQX7/1003-1038      AC F1LQX7
#=GS F1LQX7/1003-1038      OS Rattus norvegicus
#=GS F1LQX7/1003-1038      DE Neurogenic locus notch homolog protein 3
#=GS F1LQX7/1003-1038      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS G3SJN3/968-1003       AC G3SJN3
#=GS G3SJN3/968-1003       OS Gorilla gorilla gorilla
#=GS G3SJN3/968-1003       DE Notch 3
#=GS G3SJN3/968-1003       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2K6RMC9/1011-1046  AC A0A2K6RMC9
#=GS A0A2K6RMC9/1011-1046  OS Rhinopithecus roxellana
#=GS A0A2K6RMC9/1011-1046  DE Uncharacterized protein
#=GS A0A2K6RMC9/1011-1046  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; 
#=GS A0A2K6RME2/1017-1052  AC A0A2K6RME2
#=GS A0A2K6RME2/1017-1052  OS Rhinopithecus roxellana
#=GS A0A2K6RME2/1017-1052  DE Uncharacterized protein
#=GS A0A2K6RME2/1017-1052  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; 
#=GS A0A146Q6X8/1031-1075  AC A0A146Q6X8
#=GS A0A146Q6X8/1031-1075  OS Fundulus heteroclitus
#=GS A0A146Q6X8/1031-1075  DE Neurogenic locus notch protein 1
#=GS A0A146Q6X8/1031-1075  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; 
#=GS A0A146WFX3/1156-1200  AC A0A146WFX3
#=GS A0A146WFX3/1156-1200  OS Fundulus heteroclitus
#=GS A0A146WFX3/1156-1200  DE Neurogenic locus notch protein 1
#=GS A0A146WFX3/1156-1200  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; 
#=GF SQ 27
Q61982/1003-1038              -DWC-SQAPCQNGGRCVQTGA--YCICPPGWSGRLCDIQS---------
Q9UM47/1002-1037              -DWC-SRQPCQNGGRCVQTGA--YCLCPPGWSGRLCDIRS---------
F1QZF2/1015-1053              VDWCRPSNPCKNGGRCRQKDASFTCDCLGGWSGRYCDIP----------
Q9R172/1003-1038              VDWC-SQAPCQNGGRCVQTGA--YCICPPEWSGPLCDIP----------
I3LB93/1001-1039              VDWC-SRVPCQNGGRCARAGASFYCLCPPGWSGRLCDIQS---------
F6WZX4/1149-1185              -DWC-SRAPCQNGGRCARTGASFHCLCAPGWSGRLCDVQ----------
H2LKI3/991-1034               --WC-DSSPCKNGGTCWQQGASYTCQCQTGWTGLYCDIPSVSCEVAA--
A0A3Q0DCA7/1002-1038          -DWC-SQSSCQNGGRCVQPGA--YCICPPGWSGRLCDIQSL--------
A0A3Q2YJE9/997-1042           --WC-DSSPCKNGGTCWQKGASYTCQCPNGWTGLYCDIPSVSCEVAAKQ
F7GNQ0/1000-1035              -DWC-SREPCQNGGRCVQTGA--YCLCPPGWSGRLCDIRS---------
A0A3Q2P3Q3/1024-1068          --WC-DSSPCKNGGSCWQQGASYTCQCQTGWTGLYCDIPSVSCEVAAK-
A0A2K6RMB1/988-1023           -DWC-SRQPCQNGGRCVQTGA--YCLCPPGWSGRLCDIQS---------
A0A2K5CBV5/1001-1036          -DWC-SQEPCQNGGRCVQTGA--YCLCPPGWSGRLCDIRS---------
A0A2K5SFH3/1002-1037          -DWC-SREPCQNGGRCVQTGA--YCLCPPGWSGRLCDIRS---------
A0A3Q2DIC6/1024-1068          --WC-DSSPCKNGGSCWQQGASYTCQCQTGWTGLYCDIPSVSCEVAAK-
A0A2K5WUB8/962-997            -DWC-SRQPCQNGGRCVQTGA--YCLCPPGWSGRLCDIRS---------
H2NXW0/1002-1037              -DWC-SRQPCQNGGRCVQTGA--YCLCPPGWSGRLCDIRS---------
G3QIL5/998-1033               -DWC-SRQPCQNGGRCVQTGA--YCLCPPGWSGRLCDIRS---------
H2QFL8/1002-1037              -DWC-SRQPCQNGGRCVQTGA--YCLCPPGWSGRLCDIRS---------
A0A2K5NWU2/1002-1037          -DWC-SRQPCQNGGRCVQTGA--YCLCPPGWSGRLCDIRS---------
Q800E4/1015-1053              VDWCRPSNPCKNGGRCRQKDASFTCDCLGGWSGRYCDIP----------
F1LQX7/1003-1038              VDWC-SQAPCQNGGRCVQTGA--YCICPPEWSGPLCDIP----------
G3SJN3/968-1003               -DWC-SRQPCQNGGRCVQTGA--YCLCPPGWSGRLCDIRS---------
A0A2K6RMC9/1011-1046          -DWC-SRQPCQNGGRCVQTGA--YCLCPPGWSGRLCDIQS---------
A0A2K6RME2/1017-1052          -DWC-SRQPCQNGGRCVQTGA--YCLCPPGWSGRLCDIQS---------
A0A146Q6X8/1031-1075          --WC-DSSPCKNGGSCWQQGASYTCQCQTGWTGLYCDIPSVSCEVAAK-
A0A146WFX3/1156-1200          --WC-DSSPCKNGGSCWQQGASYTCQCQTGWTGLYCDIPSVSCEVAAK-
#=GC scorecons                0399054489699959384792149495589694599855100000000
#=GC scorecons_70             __**____******_*_*_**___*_*__****__***___________
#=GC scorecons_80             __**____**_***_*_*_**___*_*__**_*__***___________
#=GC scorecons_90             __**____**_***_*_*__*___*_*__**_*__***___________
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