# STOCKHOLM 1.0
#=GF ID 1.25.40.10/FF/000785
#=GF DE DNA-directed RNA polymerase
#=GF AC 1.25.40.10/FF/000785
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 67.681
#=GS Q8BKF1/156-325      AC Q8BKF1
#=GS Q8BKF1/156-325      OS Mus musculus
#=GS Q8BKF1/156-325      DE DNA-directed RNA polymerase, mitochondrial
#=GS Q8BKF1/156-325      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q8BKF1/156-325      DR GO; GO:0003899; GO:0005515; GO:0005739; GO:0005759; GO:0006390; GO:0032991; GO:0042645; GO:0043565; 
#=GS Q8BKF1/156-325      DR EC; 2.7.7.6; 
#=GS Q3U3J3/156-325      AC Q3U3J3
#=GS Q3U3J3/156-325      OS Mus musculus
#=GS Q3U3J3/156-325      DE DNA-directed RNA polymerase
#=GS Q3U3J3/156-325      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q3U3J3/156-325      DR EC; 2.7.7.6; 
#=GS E9PWD9/156-325      AC E9PWD9
#=GS E9PWD9/156-325      OS Mus musculus
#=GS E9PWD9/156-325      DE DNA-directed RNA polymerase
#=GS E9PWD9/156-325      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS E0CY15/155-325      AC E0CY15
#=GS E0CY15/155-325      OS Mus musculus
#=GS E0CY15/155-325      DE DNA-directed RNA polymerase, mitochondrial
#=GS E0CY15/155-325      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS E1BCZ0/181-332      AC E1BCZ0
#=GS E1BCZ0/181-332      OS Bos taurus
#=GS E1BCZ0/181-332      DE DNA-directed RNA polymerase
#=GS E1BCZ0/181-332      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS A0A3Q7TZ69/225-367  AC A0A3Q7TZ69
#=GS A0A3Q7TZ69/225-367  OS Vulpes vulpes
#=GS A0A3Q7TZ69/225-367  DE DNA-directed RNA polymerase
#=GS A0A3Q7TZ69/225-367  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes; Vulpes vulpes; 
#=GS M3WNJ2/213-346      AC M3WNJ2
#=GS M3WNJ2/213-346      OS Felis catus
#=GS M3WNJ2/213-346      DE DNA-directed RNA polymerase
#=GS M3WNJ2/213-346      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS A0A452EG35/171-322  AC A0A452EG35
#=GS A0A452EG35/171-322  OS Capra hircus
#=GS A0A452EG35/171-322  DE DNA-directed RNA polymerase
#=GS A0A452EG35/171-322  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Capra; Capra hircus; 
#=GS F1PCF7/185-328      AC F1PCF7
#=GS F1PCF7/185-328      OS Canis lupus familiaris
#=GS F1PCF7/185-328      DE DNA-directed RNA polymerase
#=GS F1PCF7/185-328      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GS D3ZYB6/186-319      AC D3ZYB6
#=GS D3ZYB6/186-319      OS Rattus norvegicus
#=GS D3ZYB6/186-319      DE DNA-directed RNA polymerase
#=GS D3ZYB6/186-319      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS A0A452EG30/176-327  AC A0A452EG30
#=GS A0A452EG30/176-327  OS Capra hircus
#=GS A0A452EG30/176-327  DE DNA-directed RNA polymerase
#=GS A0A452EG30/176-327  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Capra; Capra hircus; 
#=GS J9P8Y8/186-328      AC J9P8Y8
#=GS J9P8Y8/186-328      OS Canis lupus familiaris
#=GS J9P8Y8/186-328      DE DNA-directed RNA polymerase
#=GS J9P8Y8/186-328      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GF SQ 12
Q8BKF1/156-325              -EEKQLAQALQAALGRLSSREAEALARKKAKAVEAQILVLQQKFLAFFECCVCTGQVPLAHHVLVTHHNNGDRQQVLTLHMYNTVMLGWARKGSFRELVYVFLMLKDAGLSPDLCSYAAALQCMGRRDQDVRTIQRCLKQMMEEGFQPQLLFTDLVLEEEDRAALLRAVVK--
Q3U3J3/156-325              -EEKQLAQALQAALGRLSSREAEALARKKAKAVEAQILVLQQKFLAFFECCVCTGQVPLAHHVLVTHHNNGDRQQVLTLHMYNTVMLGWARKGSFRELVYVFLMLKDAGLSPDLCSYAAALQCMGRRDQDVRTIQRCLKQMMEEGFQPQLLFTDLVLEEEDRAALLRAVVK--
E9PWD9/156-325              -EEKQLAQALQAALGRLSSREAEALARKKAKAVEAQILVLQQKFLAFFECCVCTGQVPLAHHVLVTHHNNGDRQQVLTLHMYNTVMLGWARKGSFRELVYVFLMLKDAGLSPDLCSYAAALQCMGRRDQDVRTIQRCLKQMMEEGFQPQLLFTDLVLEEEDRAALLRAVVK--
E0CY15/155-325              SEEKQLAQALQAALGRLSSREAEALARKKAKAVEAQILVLQQKFLAFFECCVCTGQVPLAHHVLVTHHNNGDRQQVLTLHMYNTVMLGWARKGSFRELVYVFLMLKDAGLSPDLCSYAAALQCMGRRDQDVRTIQRCLKQMMEEGFQPQLLFTDLVLEEEDRAALLRAVVK--
E1BCZ0/181-332              ---EQLARLLQEAPKKL-SREADE-------GSESRLEGQRQKLLAFLECCLLTGHLPLAHHVLVAQHSRAPQQQLLTLPMYNTVMLGWARQGSFKELMYVFFMLKDAGLAPDLLSYAAALQCMGRLDQDAGTIRRCLKQMEQDGLSLQGLFSAVPLSTEERE----------
A0A3Q7TZ69/225-367          ------------TPHEP-SRKAEQAP--QAGAASARLEVQQHRLLAFLDCCLRTGHLPLAHHVLVTHHGRARQQQQLTLAMYNVVLLGWARKGSYKELLHVFFMVKDAGLTPDLLSYAAALQCMGRLDQSTATIQRCLDQMGQDRLKLKELFTSVPLC---------------
M3WNJ2/213-346              ---------------------------------------QQQRLLAFLECCLLSGHLPLAHHVLVTCHGKWRQRRVLTLAAYNTVMLGWARKGSFRELVYVFFMVKDAGLTPDLLSYAAALQCMGRLDQDARTVQRCLDQMAQDGLRLQDLFSSVPLCQEEQAALLQAVHKAQ
A0A452EG35/171-322          ---EQLARLLQEAPQRL-SREADE-------GSESRLEGQRQKLLAFLECCLLTGHLPLAHHVLVAQHSRAPQQQLLTLPMYNTVMLGWARQGSFKELMYVFFMLKDAGLAPDLLSYAAALQCMGRLDQDAGTIQRCLKQMEQDRLSLQGLFSAVPLSAEERE----------
F1PCF7/185-328              --------------REP-SRKAEQAP--QAGAALARLEVQQHRLLAFLDCCLRTGHLPLAHHVLVTHHSRARQQQQLTLAMYNVVLLGWARKGSYKELLYVFFMVKDAGLTPDLLSYAAALQCMGRLDQSTATIQRCLNQMGQDGLKLQELFTSVPLCQEE------------
D3ZYB6/186-319              ---------------------------------ETHILFLQQKLRTFFECCVCTGQLPLAHHMLVTHHNNQDKQQVLTLDMYNMVLLGWARKGSFRELVYVFIMLTDAGLSPDLHSYAAALQCMGRRDQDAHTIQRCLKQMAEEGFQPQLLFTNLVLEEEDRAALLR------
A0A452EG30/176-327          ---EQLARLLQEAPQRL-SREADE-------GSESRLEGQRQKLLAFLECCLLTGHLPLAHHVLVAQHSRAPQQQLLTLPMYNTVMLGWARQGSFKELMYVFFMLKDAGLAPDLLSYAAALQCMGRLDQDAGTIQRCLKQMEQDRLSLQGLFSAVPLSAEERE----------
J9P8Y8/186-328              ---------------EP-SRKAEQAP--QAGAALARLEVQQHRLLAFLDCCLRTGHLPLAHHVLVTHHSRARQQQQLTLAMYNVVLLGWARKGSYKELLYVFFMVKDAGLTPDLLSYAAALQCMGRLDQSTATIQRCLNQMGQDGLKLQELFTSVPLCQEE------------
#=GC scorecons              00012221122122233055354211001214244453357776789679963796699999899769554468849994799596999997997799589959679999599949999999999949965498899959936766458399646593375432221110100
#=GC scorecons_70           ________________________________________************_*************_*_____**_***_***_**************_***_*******_***_***********_***__******_**_****__*_***_*_*__*_____________
#=GC scorecons_80           _________________________________________*__***_***__**__********__*_____**_***_***_*_*****_***_**_***_*_*****_***_***********_**___******_**_______*_**____*__*_____________
#=GC scorecons_90           ______________________________________________*__**___*__*****_**__*________***__**_*_*****_**__**_***_*__****_***_***********_**___******_**_______*_**____*________________
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