# STOCKHOLM 1.0
#=GF ID 1.25.40.10/FF/000782
#=GF DE Pentatricopeptide repeat-containing protein
#=GF AC 1.25.40.10/FF/000782
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 96.765
#=GS Q9SVH0/377-438      AC Q9SVH0
#=GS Q9SVH0/377-438      OS Arabidopsis thaliana
#=GS Q9SVH0/377-438      DE Pentatricopeptide repeat-containing protein At4g20770
#=GS Q9SVH0/377-438      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9SV26/350-420      AC Q9SV26
#=GS Q9SV26/350-420      OS Arabidopsis thaliana
#=GS Q9SV26/350-420      DE Pentatricopeptide repeat-containing protein At4g01030, mitochondrial
#=GS Q9SV26/350-420      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F6I1N6/341-400      AC F6I1N6
#=GS F6I1N6/341-400      OS Vitis vinifera
#=GS F6I1N6/341-400      DE Uncharacterized protein
#=GS F6I1N6/341-400      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS F6HR00/1-54         AC F6HR00
#=GS F6HR00/1-54         OS Vitis vinifera
#=GS F6HR00/1-54         DE Uncharacterized protein
#=GS F6HR00/1-54         DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS K4D4Y4/370-427      AC K4D4Y4
#=GS K4D4Y4/370-427      OS Solanum lycopersicum
#=GS K4D4Y4/370-427      DE Uncharacterized protein
#=GS K4D4Y4/370-427      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; 
#=GS K4AZV8/509-577      AC K4AZV8
#=GS K4AZV8/509-577      OS Solanum lycopersicum
#=GS K4AZV8/509-577      DE Uncharacterized protein
#=GS K4AZV8/509-577      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; 
#=GS D7TWL0/142-209      AC D7TWL0
#=GS D7TWL0/142-209      OS Vitis vinifera
#=GS D7TWL0/142-209      DE Uncharacterized protein
#=GS D7TWL0/142-209      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS A0A1D6H1F1/379-446  AC A0A1D6H1F1
#=GS A0A1D6H1F1/379-446  OS Zea mays
#=GS A0A1D6H1F1/379-446  DE Pentatricopeptide repeat-containing protein
#=GS A0A1D6H1F1/379-446  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS R0GPI8/378-440      AC R0GPI8
#=GS R0GPI8/378-440      OS Capsella rubella
#=GS R0GPI8/378-440      DE Uncharacterized protein
#=GS R0GPI8/378-440      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7MFI5/366-426      AC D7MFI5
#=GS D7MFI5/366-426      OS Arabidopsis lyrata subsp. lyrata
#=GS D7MFI5/366-426      DE Predicted protein
#=GS D7MFI5/366-426      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A3L6RRL6/380-444  AC A0A3L6RRL6
#=GS A0A3L6RRL6/380-444  OS Panicum miliaceum
#=GS A0A3L6RRL6/380-444  DE Pentatricopeptide repeat-containing protein
#=GS A0A3L6RRL6/380-444  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; 
#=GS A0A3L6EHM2/379-446  AC A0A3L6EHM2
#=GS A0A3L6EHM2/379-446  OS Zea mays
#=GS A0A3L6EHM2/379-446  DE Pentatricopeptide repeat-containing protein
#=GS A0A3L6EHM2/379-446  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GF SQ 12
Q9SVH0/377-438              ---------PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI------
Q9SV26/350-420              --GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHG----
F6I1N6/341-400              --------MTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLG---------
F6HR00/1-54                 --------MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSL---------------
K4D4Y4/370-427              ------------DVVSWNTLIAGCVSSSRYEEALRFLREMLLEGFEPSLYTYSSILSICGDLPAIEWGKQ-------
K4AZV8/509-577              MIRRIKSSGMSPNVISWTSLVSGCSQQGYFREAFEFLTQMQDEGIKVNSVTVASLLQACAGLSLLHIGK--------
D7TWL0/142-209              ------ERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGL---
A0A1D6H1F1/379-446          ---------PKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVR
R0GPI8/378-440              ---------PHPSVRAWNAMLSGYSNYEHYQEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIH-----
D7MFI5/366-426              ------------SVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHG----
A0A3L6RRL6/380-444          ----------KPSVTTWNTLLSGYCQDELHQDTIELFRRMQHQNVQPDRTTLAVILSSCSRLGILELGKQVHSAS--
A0A3L6EHM2/379-446          ---------PKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVR
#=GC scorecons              00000000022359459655569644353436754464475355537533954467547539324327432110000
#=GC scorecons_70           _____________*__*____***_______**___*__*______*___*___**__*__*_____*_________
#=GC scorecons_80           _____________*__*_____*_________*______*______*___*____*__*__*_____*_________
#=GC scorecons_90           _____________*__*_____*___________________________*__________*_______________
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