# STOCKHOLM 1.0
#=GF ID 1.25.40.10/FF/000665
#=GF DE Pre-mRNA-processing factor 6
#=GF AC 1.25.40.10/FF/000665
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 57.185
#=GS D0NDY2/399-587      AC D0NDY2
#=GS D0NDY2/399-587      OS Phytophthora infestans T30-4
#=GS D0NDY2/399-587      DE Pre-mRNA-processing factor, putative
#=GS D0NDY2/399-587      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS A0A226BQG9/362-547  AC A0A226BQG9
#=GS A0A226BQG9/362-547  OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226BQG9/362-547  DE Pre-mRNA-processing factor 6
#=GS A0A226BQG9/362-547  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS F1A338/372-519      AC F1A338
#=GS F1A338/372-519      OS Dictyostelium purpureum
#=GS F1A338/372-519      DE Uncharacterized protein
#=GS F1A338/372-519      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS H3GKT1/399-588      AC H3GKT1
#=GS H3GKT1/399-588      OS Phytophthora ramorum
#=GS H3GKT1/399-588      DE Uncharacterized protein
#=GS H3GKT1/399-588      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS W2XQ91/398-586      AC W2XQ91
#=GS W2XQ91/398-586      OS Phytophthora parasitica CJ01A1
#=GS W2XQ91/398-586      DE Uncharacterized protein
#=GS W2XQ91/398-586      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8CFB7/276-461  AC A0A0W8CFB7
#=GS A0A0W8CFB7/276-461  OS Phytophthora nicotianae
#=GS A0A0W8CFB7/276-461  DE Uncharacterized protein
#=GS A0A0W8CFB7/276-461  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS Q5KQ25/366-542      AC Q5KQ25
#=GS Q5KQ25/366-542      OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KQ25/366-542      DE Pre-mRNA splicing factor prp1, putative
#=GS Q5KQ25/366-542      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS Q561C4/366-542      AC Q561C4
#=GS Q561C4/366-542      OS Cryptococcus neoformans var. neoformans B-3501A
#=GS Q561C4/366-542      DE Uncharacterized protein
#=GS Q561C4/366-542      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS J9VDV4/363-547      AC J9VDV4
#=GS J9VDV4/363-547      OS Cryptococcus neoformans var. grubii H99
#=GS J9VDV4/363-547      DE Pre-mRNA-processing factor 6
#=GS J9VDV4/363-547      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS W2HII1/398-586      AC W2HII1
#=GS W2HII1/398-586      OS Phytophthora parasitica
#=GS W2HII1/398-586      DE Uncharacterized protein
#=GS W2HII1/398-586      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W3A3C5/399-586      AC W3A3C5
#=GS W3A3C5/399-586      OS Phytophthora parasitica P10297
#=GS W3A3C5/399-586      DE Uncharacterized protein
#=GS W3A3C5/399-586      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2LY45/398-586      AC W2LY45
#=GS W2LY45/398-586      OS Phytophthora parasitica
#=GS W2LY45/398-586      DE Uncharacterized protein
#=GS W2LY45/398-586      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2PE53/398-586      AC W2PE53
#=GS W2PE53/398-586      OS Phytophthora parasitica INRA-310
#=GS W2PE53/398-586      DE Uncharacterized protein
#=GS W2PE53/398-586      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8CPQ3/398-586  AC A0A0W8CPQ3
#=GS A0A0W8CPQ3/398-586  OS Phytophthora nicotianae
#=GS A0A0W8CPQ3/398-586  DE Pre-mRNA-processing factor 6
#=GS A0A0W8CPQ3/398-586  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GF SQ 14
D0NDY2/399-587              -----LKKLVMRRALEFIPNSVKLWKALIELE-DVDGARILLGRAVECVPQAVDLWLALARLETYENAKKTLNKARAAIPTEPSIWITAAKL----------------------EEAQGKNL-DMIDRIIQLALKSLQKHQVVMNREMWLKEAEACELADAPLTCAAIVRASLDVGVDPEDRKRTWMDDAENSINRGALLTAKAIYAAALKVFPGKKS
A0A226BQG9/362-547          ETDINAKKRVLRKALEFVPNSVGLWKETVNLEDDPEDARVLLTRAVEVIPNSVELWLTLARLETPENAKQVLNSARKRIPTSHEIWIAAGRLAEQSPSAVAVKPEVKMEDEAEYEAEQRKKLAQQVNKLMAGAVNSLRKNQVILSREQWLQEAEKCEQDGSPLTAQAIVKATIAQDVEEEDRRSVW--------------------------------
F1A338/372-519              ---------VLRRALEFIPTSVKLWKEAVELE-EPEDARILLGRAVECVPDNVDLWLALANLETYEKAREVLNKARQAIPSSPEIWISAAQL----------------------EESKGKN--DNVNKIIKKAIKSLSSNIMVMNREKWIEEAEKSEKNQYYATCQAIIFETIGMGIEEEER------------------------------------
H3GKT1/399-588              ----ELKKLVMRRALEFIPNSVKLWKALIELE-DVDGARILLGRAVECVPQAVDLWLALARLETYENAKKTLNKARAAIPTEPSIWITAAKL----------------------EEAQAKNL-DMIDRIIQLALKSLQKHQVVMNREMWLKEAEACEQADAPLTCAAIVRASLDVGVEPEDRKRTWMDDAENSINRGALLTAKAVYASALKVFPGKKS
W2XQ91/398-586              ----ELKKLVMRRALEFIPNSVKLWKALIELE-DVDGARILLGRAVECVPQAVDLWLALARLETYENAKKTLNKARAAIPTEPSIWITAAKL----------------------EEAQGKNL-DMIDRIIQLALKSLQKHQVVMNREMWLKEAEACEQADAPLTCAAIVRASLDVGVDPEDRKRTWMDDAENSINRGALLTAKAIYAAALKVFPGKK-
A0A0W8CFB7/276-461          ----ELKKLVMRRALEFIPNSVKLWKALIELE-DVDGARILLGRAVECVPQAVDLWLALARLETYENAKKTLNKARAAIPTEPSIWITAAKL----------------------EEAQGKNL-DMIDRIIQLALKSLQKHQVVMNREMWLKEAEACEQADAPLTCAAIVRASLDVGVDPEDRKRTWMDDAENSINRGALLTAKAIYAAALKVFP----
Q5KQ25/366-542              ----NAKKRVLRKALEFVPNSVGLWKETVNLEDDPEDARVLLTRAVEVIPNSVELWLTLARLETPENAKQVLNSARKRIPTSHEIWIAAGRLAEQSPSAVAVKPEVKMEDEAEYEAEQRKKLAQQVNKLMAGAVNSLRKNQVILSREQWLQEAEKCEQDGSPLTAQAIVKATIAQDVEEED-------------------------------------
Q561C4/366-542              ----NAKKRVLRKALEFVPNSVGLWKETVNLEDDPEDARVLLTRAVEVIPNSVELWLTLARLETPENAKQVLNSARKRIPTSHEIWIAAGRLAEQSPSAVAVKPEVKMEDEAEYEAEQRKKLAQQVNKLMAGAVNSLRKNQVILSREQWLQEAEKCEQDGSPLTAQAIVKATIAQDVEEED-------------------------------------
J9VDV4/363-547              -TDINAKKRVLRKALEFVPNSVGLWKETVNLEDDPEDARVLLTRAVEVIPNSVELWLTLARLETPENAKQVLNSARKRIPTSHEIWIAAGRLAEQSPSAVAVKPEVKMEDEAEYEAEQRKKLAQQVNKLMAGAVNSLRKNQVILSREQWLQEAEKCEQDGSPLTAQAIVKATIAQDVEEEDRRSVW--------------------------------
W2HII1/398-586              ----ELKKLVMRRALEFIPNSVKLWKALIELE-DVDGARILLGRAVECVPQAVDLWLALARLETYENAKKTLNKARAAIPTEPSIWITAAKL----------------------EEAQGKNL-DMIDRIIQLALKSLQKHQVVMNREMWLKEAEACEQADAPLTCAAIVRASLDVGVDPEDRKRTWMDDAENSINRGALLTAKAIYAAALKVFPGKK-
W3A3C5/399-586              -----LKKLVMRRALEFIPNSVKLWKALIELE-DVDGARILLGRAVECVPQAVDLWLALARLETYENAKKTLNKARAAIPTEPSIWITAAKL----------------------EEAQGKNL-DMIDRIIQLALKSLQKHQVVMNREMWLKEAEACEQADAPLTCAAIVRASLDVGVDPEDRKRTWMDDAENSINRGALLTAKAIYAAALKVFPGKK-
W2LY45/398-586              ----ELKKLVMRRALEFIPNSVKLWKALIELE-DVDGARILLGRAVECVPQAVDLWLALARLETYENAKKTLNKARAAIPTEPSIWITAAKL----------------------EEAQGKNL-DMIDRIIQLALKSLQKHQVVMNREMWLKEAEACEQADAPLTCAAIVRASLDVGVDPEDRKRTWMDDAENSINRGALLTAKAIYAAALKVFPGKK-
W2PE53/398-586              ----ELKKLVMRRALEFIPNSVKLWKALIELE-DVDGARILLGRAVECVPQAVDLWLALARLETYENAKKTLNKARAAIPTEPSIWITAAKL----------------------EEAQGKNL-DMIDRIIQLALKSLQKHQVVMNREMWLKEAEACEQADAPLTCAAIVRASLDVGVDPEDRKRTWMDDAENSINRGALLTAKAIYAAALKVFPGKK-
A0A0W8CPQ3/398-586          ----ELKKLVMRRALEFIPNSVKLWKALIELE-DVDGARILLGRAVECVPQAVDLWLALARLETYENAKKTLNKARAAIPTEPSIWITAAKL----------------------EEAQGKNL-DMIDRIIQLALKSLQKHQVVMNREMWLKEAEACEQADAPLTCAAIVRASLDVGVDPEDRKRTWMDDAENSINRGALLTAKAIYAAALKVFPGKK-
#=GC scorecons              00003477396979999797995999547699185769979959999579559799969979994979855995994599755599959669111111111111111111111195475967154767664396699576777669949759995797455779559985766546875985322411111111111111111111111111111110
#=GC scorecons_70           ______**_*************_***__*_**_*_*_*****_****_**__************_****__**_**__***___***_*_**______________________*__*_*_*___*****__*__**_*_****_**_**_***_***___***__***_*_*___**_**_____________________________________
#=GC scorecons_80           _________*_*_****_****_***____**_*___**_**_****__*__*_***_******_****__**_**__***___***_*__*______________________*__*_*____________*__**_*_**___**_**_***_***___***__***_*_____*__**_____________________________________
#=GC scorecons_90           _________*_*_****_*_**_***____**_*___**_**_****__*__*_***_**_***_*_**__**_**__**____***_*__*______________________*____*____________*__**________**_*__***__*______*__***_______*__**_____________________________________
//