# STOCKHOLM 1.0
#=GF ID 1.25.40.10/FF/000636
#=GF DE Pentatricopeptide repeat-containing protein
#=GF AC 1.25.40.10/FF/000636
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 73.536
#=GS A0A178WDL1/312-428  AC A0A178WDL1
#=GS A0A178WDL1/312-428  OS Arabidopsis thaliana
#=GS A0A178WDL1/312-428  DE Uncharacterized protein
#=GS A0A178WDL1/312-428  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9LR72/312-428      AC Q9LR72
#=GS Q9LR72/312-428      OS Arabidopsis thaliana
#=GS Q9LR72/312-428      DE Putative pentatricopeptide repeat-containing protein At1g03510
#=GS Q9LR72/312-428      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q10PG4/401-519      AC Q10PG4
#=GS Q10PG4/401-519      OS Oryza sativa Japonica Group
#=GS Q10PG4/401-519      DE Os03g0235200 protein
#=GS Q10PG4/401-519      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS Q10AH5/317-431      AC Q10AH5
#=GS Q10AH5/317-431      OS Oryza sativa Japonica Group
#=GS Q10AH5/317-431      DE Os03g0852000 protein
#=GS Q10AH5/317-431      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS M4EP13/275-391      AC M4EP13
#=GS M4EP13/275-391      OS Brassica rapa subsp. pekinensis
#=GS M4EP13/275-391      DE Uncharacterized protein
#=GS M4EP13/275-391      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS V4KFP7/312-428      AC V4KFP7
#=GS V4KFP7/312-428      OS Eutrema salsugineum
#=GS V4KFP7/312-428      DE Uncharacterized protein
#=GS V4KFP7/312-428      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS R0IKC5/311-427      AC R0IKC5
#=GS R0IKC5/311-427      OS Capsella rubella
#=GS R0IKC5/311-427      DE Uncharacterized protein
#=GS R0IKC5/311-427      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS M8B0S9/197-316      AC M8B0S9
#=GS M8B0S9/197-316      OS Aegilops tauschii
#=GS M8B0S9/197-316      DE Uncharacterized protein
#=GS M8B0S9/197-316      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; 
#=GS A0A078FRI0/313-428  AC A0A078FRI0
#=GS A0A078FRI0/313-428  OS Brassica napus
#=GS A0A078FRI0/313-428  DE BnaA08g27460D protein
#=GS A0A078FRI0/313-428  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS D7KCF7/311-428      AC D7KCF7
#=GS D7KCF7/311-428      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KCF7/311-428      DE Pentatricopeptide repeat-containing protein
#=GS D7KCF7/311-428      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A0D3DIP0/313-428  AC A0A0D3DIP0
#=GS A0A0D3DIP0/313-428  OS Brassica oleracea var. oleracea
#=GS A0A0D3DIP0/313-428  DE Uncharacterized protein
#=GS A0A0D3DIP0/313-428  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS I1GKR0/316-436      AC I1GKR0
#=GS I1GKR0/316-436      OS Brachypodium distachyon
#=GS I1GKR0/316-436      DE Uncharacterized protein
#=GS I1GKR0/316-436      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS J3LUU4/314-432      AC J3LUU4
#=GS J3LUU4/314-432      OS Oryza brachyantha
#=GS J3LUU4/314-432      DE Uncharacterized protein
#=GS J3LUU4/314-432      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; 
#=GS A0A078IQN0/313-428  AC A0A078IQN0
#=GS A0A078IQN0/313-428  OS Brassica napus
#=GS A0A078IQN0/313-428  DE BnaC08g46300D protein
#=GS A0A078IQN0/313-428  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS I1H7P9/388-505      AC I1H7P9
#=GS I1H7P9/388-505      OS Brachypodium distachyon
#=GS I1H7P9/388-505      DE Uncharacterized protein
#=GS I1H7P9/388-505      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GF SQ 15
A0A178WDL1/312-428          -DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW-----CLFK----
Q9LR72/312-428              -DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW-----CLFK----
Q10PG4/401-519              ---CIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVH-----
Q10AH5/317-431              --FGVEACGDHYSCLVDVLGRAGRLRQAYDVIQTMPVKVTAKAWGALLAACRKYGEVGLAEVAGRALFEIEPENAGNFVSLANIYSGMGMHDKAEQVRREMEQRGVRRLPGSSW-----MIH-----
M4EP13/275-391              -GYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEVELAEIAAKELWKIEPENPANYVLLGKIYMSVGRQEEAERLRMEMRDRGVKVSPGSSW-----CLFK----
V4KFP7/312-428              -VYGLRASKDHYSCLVDVLSRVGRFEEAYKLIQGMSEKPTAKTWGALLGACRNYGEVELAEIAANELWKIEPENPANYVLLGKIYMSVGRQEEAERLRTEMKERGVKVSPGSSW-----CLFK----
R0IKC5/311-427              ADYGLRASKDHYSCLVDVLSRVGRFEEAYKVIETMPEKPTAKTWGALLGACRNYGEVELAEIAAKELWMIEPENPANYVLLGKIYMSVGRQEEAESLRLKMKERGVRVTPGSSW-----CLF-----
M8B0S9/197-316              --YGIGHTPDHYACVIDLLSRSGQFERAEEMINKMAVKPNKFLWASLLGGCRIHKNVRLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEGVRKIMETKGITKMPASSWIEVGRRVH-----
A0A078FRI0/313-428          --YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEVELAEIAAKELWKIEPENPANYVLLGKIYMSVGRQEEAERLRMEMRDRGVKVSPGSSW-----CLFK----
D7KCF7/311-428              GDYGLRASRDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEVELAEIAAKELWKIEPENPANYVLLGKIYMSVGRQEEAERLRMEMKESGVKVSPGSSW-----CLFK----
A0A0D3DIP0/313-428          --YGLSASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEVELAEIAAKELWKIEPENPANYVLLGKIYMSVGRQEEAERLRMEMRDRGVKVSPGSSW-----CLFK----
I1GKR0/316-436              -TYGVEACGDHYSCLVDVLGRAGRLHQAYNVIQTMPVRVTAKAWGALLAACRKYGEVGLAEVAARALFELEPGNAGTFVSLANIYSGVGMHAEAERVRRDMEERGVQRSPGSSW-----MIHRKSSQ
J3LUU4/314-432              -RFGVEACGDHYSCLVDVLGRAGRLHQAYDVIRTMPIKATVKAWGALLAGCRKYGEVGLAEVAGRALFEMEPENAGNFVSLANIYSGMGMHDEAERVRRDMEQRGVRRLPGSSW-----TIHRKS--
A0A078IQN0/313-428          --YGLSASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEVELAEIAAKELWKIEPENPANYVLLGKIYMSVGRQEEAERLRMEMRDRGVKVSPGSSW-----CLFK----
I1H7P9/388-505              --YGIQHTADHYACVIDLLSRSGQFERAEEMINKMPVKPNKFLWASLLGGCRIHKNVCLARRAAEALFEIEPENPATYVTLANIYTSVGLFDEVEGVRGIMESKGIRKVPASSW-EKSACV------
#=GC scorecons              0067545549996967969694967659556954964866544966996699475684996497559546998966679496699467944686946933954597544969990000045420000
#=GC scorecons_70           __**_____************_****_*__**__**_***___******_**_*_**_**__**__*__*******_**_*__**_***___***_**__*___**___*****_____________
#=GC scorecons_80           ___*_____***_*_**_*_*_*____*___*__*__*_____*__**__**_*__*_**__**__*___****___**_*__**__**___*_*__*__*___**___*_***_____________
#=GC scorecons_90           _________***_*__*_*_*_*____*___*__*__*_____*__**__**____*_**__*___*___****____*_*__**___*___*_*__*__*___*____*_***_____________
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