# STOCKHOLM 1.0
#=GF ID 1.25.40.10/FF/000575
#=GF DE Pre-mRNA-splicing factor, Crooked neck-like protein
#=GF AC 1.25.40.10/FF/000575
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 64.370
#=GS P87312/308-459      AC P87312
#=GS P87312/308-459      OS Schizosaccharomyces pombe 972h-
#=GS P87312/308-459      DE Pre-mRNA-splicing factor cwf4
#=GS P87312/308-459      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS P87312/308-459      DR GO; GO:0000974; GO:0005515; GO:0005634; GO:0005681; GO:0045292; GO:0071004; GO:0071014; 
#=GS D0N9P0/307-473      AC D0N9P0
#=GS D0N9P0/307-473      OS Phytophthora infestans T30-4
#=GS D0N9P0/307-473      DE Pre-mRNA-splicing factor, Crooked neck-like protein
#=GS D0N9P0/307-473      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS B8C670/330-495      AC B8C670
#=GS B8C670/330-495      OS Thalassiosira pseudonana
#=GS B8C670/330-495      DE Cell cycle control protein cwf4
#=GS B8C670/330-495      DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS H3G9F8/306-472      AC H3G9F8
#=GS H3G9F8/306-472      OS Phytophthora ramorum
#=GS H3G9F8/306-472      DE Uncharacterized protein
#=GS H3G9F8/306-472      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS W2WQQ0/307-473      AC W2WQQ0
#=GS W2WQQ0/307-473      OS Phytophthora parasitica CJ01A1
#=GS W2WQQ0/307-473      DE Uncharacterized protein
#=GS W2WQQ0/307-473      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8DHW3/307-472  AC A0A0W8DHW3
#=GS A0A0W8DHW3/307-472  OS Phytophthora nicotianae
#=GS A0A0W8DHW3/307-472  DE Stromal membrane-associated protein 2
#=GS A0A0W8DHW3/307-472  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS A0A3R7J9E2/307-473  AC A0A3R7J9E2
#=GS A0A3R7J9E2/307-473  OS Phytophthora kernoviae
#=GS A0A3R7J9E2/307-473  DE Uncharacterized protein
#=GS A0A3R7J9E2/307-473  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora kernoviae; 
#=GS A0A329SVP5/307-472  AC A0A329SVP5
#=GS A0A329SVP5/307-472  OS Phytophthora cactorum
#=GS A0A329SVP5/307-472  DE Crooked neck-like protein 1
#=GS A0A329SVP5/307-472  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS W2KUB0/307-473      AC W2KUB0
#=GS W2KUB0/307-473      OS Phytophthora parasitica
#=GS W2KUB0/307-473      DE Uncharacterized protein
#=GS W2KUB0/307-473      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS V9EUE3/307-473      AC V9EUE3
#=GS V9EUE3/307-473      OS Phytophthora parasitica P1569
#=GS V9EUE3/307-473      DE Uncharacterized protein
#=GS V9EUE3/307-473      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2GGH0/307-473      AC W2GGH0
#=GS W2GGH0/307-473      OS Phytophthora parasitica
#=GS W2GGH0/307-473      DE Uncharacterized protein
#=GS W2GGH0/307-473      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A080ZVV4/307-473  AC A0A080ZVV4
#=GS A0A080ZVV4/307-473  OS Phytophthora parasitica P1976
#=GS A0A080ZVV4/307-473  DE Uncharacterized protein
#=GS A0A080ZVV4/307-473  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2YYZ4/307-472      AC W2YYZ4
#=GS W2YYZ4/307-472      OS Phytophthora parasitica P10297
#=GS W2YYZ4/307-472      DE Uncharacterized protein
#=GS W2YYZ4/307-472      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2IQ95/307-473      AC W2IQ95
#=GS W2IQ95/307-473      OS Phytophthora parasitica
#=GS W2IQ95/307-473      DE Uncharacterized protein
#=GS W2IQ95/307-473      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2N075/307-473      AC W2N075
#=GS W2N075/307-473      OS Phytophthora parasitica
#=GS W2N075/307-473      DE Uncharacterized protein
#=GS W2N075/307-473      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2PZ33/307-473      AC W2PZ33
#=GS W2PZ33/307-473      OS Phytophthora parasitica INRA-310
#=GS W2PZ33/307-473      DE Uncharacterized protein
#=GS W2PZ33/307-473      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8DZ32/307-473  AC A0A0W8DZ32
#=GS A0A0W8DZ32/307-473  OS Phytophthora nicotianae
#=GS A0A0W8DZ32/307-473  DE Crooked neck protein 1
#=GS A0A0W8DZ32/307-473  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GF SQ 17
P87312/308-459              -YEKLLKDSPYDYDTWLDLLKLEES------------AGDINTIRETYEKAIAKVPE-VVEKNAWRRYVYIWLNYCLFEEIDVKDVD-------RARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKPKLFRGYIEFEDAIKQFDRCRILYEK---
D0N9P0/307-473              VYEQQVAANALDYDSWLEYIKLEENEAAG--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARLTLGEALGRCPKKKLFTNYIELELMMGEIDRCRKIYMRFLE
B8C670/330-495              -YEKRVTADPTDFDAWFEYAKMEEENEESLQAGSNSSTDNYNKVREVYERAIGNVPPSMEDKQHWRRYIYLWIYYALYEELQRRD-------LYRASKIYDSCIDLIPHAKFSFSKIWINAAKLHIRRKDLVSARKLLGKAIGLCGKERIFEEYIALELALGEVDRCRSLYTNY--
H3G9F8/306-472              VYEQQVASNALDYDSWLEYIKLEENEAAG--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSKRCSQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDAQGARRTLGEALGRCPKKKLFTSYIELELMMGEIDRCRKIYTRFLE
W2WQQ0/307-473              VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFLE
A0A0W8DHW3/307-472          VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFL-
A0A3R7J9E2/307-473          VYEQQIAANVLDYDSWLEYIKLEESEAAE--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAADSDDSGSSSERCRQVYKTCLNLIPHEKFTFAKIWILYAKFLIRQRDVQGARLALGEAVGRCPKKKLFTSYIELELMMGEIDRCRKIYMRFLE
A0A329SVP5/307-472          VYEQQVAANALDYDSWLEYVKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDLQGARMTLGEALGRCPKKKLFTNYIELELMMGEIDRCRNIYMRFL-
W2KUB0/307-473              VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFLE
V9EUE3/307-473              VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFLE
W2GGH0/307-473              VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFLE
A0A080ZVV4/307-473          VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFLE
W2YYZ4/307-472              VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFL-
W2IQ95/307-473              VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFLE
W2N075/307-473              VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFLE
W2PZ33/307-473              VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFLE
A0A0W8DZ32/307-473          VYEQQVAANALDYDSWLEYIKLEENEAAS--------SQSFGLVREVYERAIANVPP-IPEKKYWRRYIYLWIKYALFEELLAGDNDDSGSSSERCKQVYKTCLKLIPHDKFTFAKIWILYAKFLIRQRDVQGARMTLGEALGRCPKKKLYTNYIELELMMGEIDRCRKIYMRFLE
#=GC scorecons              29964645554979597764979943334000000005455547996997996699606479549999797974969799734493522222329546795467699994996969797459673797765449945995969496947774499679556675999936945421
#=GC scorecons_70           _**__*_____***_****_****___________________*************____**__*********_*******___*_________*___**__**_****_*********__*_*_*****___**__**_***_***_***__*****___**_****__*_____
#=GC scorecons_80           _**________***_*_*__****___________________***_*****__**____**__******_*__*_****____*_________*___**_____****_**_*_*_*___*____*_*____**__**_*_*_*_*_*_*__**__*______****__*_____
#=GC scorecons_90           _**________*_*_*____*_**____________________**_**_**__**_____*__****_*_*__*_*_**____*_________*____*_____****_**_*_*_*___*____*______**__**_*_*_*_*______**__*______****__*_____
//