# STOCKHOLM 1.0
#=GF ID 1.25.40.10/FF/000553
#=GF DE Pentatricopeptide repeat-containing protein, mitochondrial
#=GF AC 1.25.40.10/FF/000553
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 77.908
#=GS Q9M4P3/403-588      AC Q9M4P3
#=GS Q9M4P3/403-588      OS Arabidopsis thaliana
#=GS Q9M4P3/403-588      DE Pentatricopeptide repeat-containing protein At4g16835, mitochondrial
#=GS Q9M4P3/403-588      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F6HL62/388-573      AC F6HL62
#=GS F6HL62/388-573      OS Vitis vinifera
#=GS F6HL62/388-573      DE Uncharacterized protein
#=GS F6HL62/388-573      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS A0A0P0XBZ1/516-704  AC A0A0P0XBZ1
#=GS A0A0P0XBZ1/516-704  OS Oryza sativa Japonica Group
#=GS A0A0P0XBZ1/516-704  DE Os08g0153600 protein
#=GS A0A0P0XBZ1/516-704  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS Q0J7Z2/359-545      AC Q0J7Z2
#=GS Q0J7Z2/359-545      OS Oryza sativa Japonica Group
#=GS Q0J7Z2/359-545      DE Os08g0153600 protein
#=GS Q0J7Z2/359-545      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS K7K942/380-571      AC K7K942
#=GS K7K942/380-571      OS Glycine max
#=GS K7K942/380-571      DE Uncharacterized protein
#=GS K7K942/380-571      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A1J3K9F3/163-354  AC A0A1J3K9F3
#=GS A0A1J3K9F3/163-354  OS Noccaea caerulescens
#=GS A0A1J3K9F3/163-354  DE Pentatricopeptide repeat-containing protein, mitochondrial
#=GS A0A1J3K9F3/163-354  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS I1I1K3/328-550      AC I1I1K3
#=GS I1I1K3/328-550      OS Brachypodium distachyon
#=GS I1I1K3/328-550      DE Uncharacterized protein
#=GS I1I1K3/328-550      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A1D6HJ03/321-499  AC A0A1D6HJ03
#=GS A0A1D6HJ03/321-499  OS Zea mays
#=GS A0A1D6HJ03/321-499  DE Pentatricopeptide repeat-containing protein mitochondrial
#=GS A0A1D6HJ03/321-499  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A445L1X7/394-563  AC A0A445L1X7
#=GS A0A445L1X7/394-563  OS Glycine soja
#=GS A0A445L1X7/394-563  DE Pentatricopeptide repeat-containing protein, mitochondrial
#=GS A0A445L1X7/394-563  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; 
#=GS A0A0D9X4J0/418-608  AC A0A0D9X4J0
#=GS A0A0D9X4J0/418-608  OS Leersia perrieri
#=GS A0A0D9X4J0/418-608  DE Uncharacterized protein
#=GS A0A0D9X4J0/418-608  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; 
#=GS J3MQF7/253-442      AC J3MQF7
#=GS J3MQF7/253-442      OS Oryza brachyantha
#=GS J3MQF7/253-442      DE Uncharacterized protein
#=GS J3MQF7/253-442      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; 
#=GS A0A0E0QEG0/359-547  AC A0A0E0QEG0
#=GS A0A0E0QEG0/359-547  OS Oryza rufipogon
#=GS A0A0E0QEG0/359-547  DE Uncharacterized protein
#=GS A0A0E0QEG0/359-547  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; 
#=GS A0A0E0EHZ7/355-543  AC A0A0E0EHZ7
#=GS A0A0E0EHZ7/355-543  OS Oryza meridionalis
#=GS A0A0E0EHZ7/355-543  DE Uncharacterized protein
#=GS A0A0E0EHZ7/355-543  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; 
#=GS A0A0E0G3Y8/349-537  AC A0A0E0G3Y8
#=GS A0A0E0G3Y8/349-537  OS Oryza sativa f. spontanea
#=GS A0A0E0G3Y8/349-537  DE Uncharacterized protein
#=GS A0A0E0G3Y8/349-537  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; 
#=GS A2XRQ6/359-548      AC A2XRQ6
#=GS A2XRQ6/359-548      OS Oryza sativa Indica Group
#=GS A2XRQ6/359-548      DE Uncharacterized protein
#=GS A2XRQ6/359-548      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A0E0HY25/358-547  AC A0A0E0HY25
#=GS A0A0E0HY25/358-547  OS Oryza sativa f. spontanea
#=GS A0A0E0HY25/358-547  DE Uncharacterized protein
#=GS A0A0E0HY25/358-547  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; 
#=GS A0A0E0HY26/359-547  AC A0A0E0HY26
#=GS A0A0E0HY26/359-547  OS Oryza sativa f. spontanea
#=GS A0A0E0HY26/359-547  DE Uncharacterized protein
#=GS A0A0E0HY26/359-547  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; 
#=GS I1JX77/394-563      AC I1JX77
#=GS I1JX77/394-563      OS Glycine max
#=GS I1JX77/394-563      DE Uncharacterized protein
#=GS I1JX77/394-563      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GF SQ 18
Q9M4P3/403-588              ------------------------------------IGMAYFESMVR-DYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWH------
F6HL62/388-573              ------------------------------------RGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQG-------
A0A0P0XBZ1/516-704          -----------------------------------DFGIRCFEGMQE-LYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSE----
Q0J7Z2/359-545              -----------------------------------DFGIRCFEGMQE-LYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRH------
K7K942/380-571              ------------------------------------KGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLA-
A0A1J3K9F3/163-354          ------------------------------------IGMEYFNSMVR-DYRVEPRPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPQAAIFGTLLGACRVHKNVELAEFAAEKLLELDPRNAAGYVQLANIYASRSRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHDVEEEQKKKLLLWHSEKLAV
I1I1K3/328-550              REAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQE-VYGIEARVDHYSCMVDLLCRAGSLERAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEERMKAMGYVPDLDFALHDVDESLKVQMLMRHS-----
A0A1D6HJ03/321-499          MQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQE-AYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQ-------------------------------------------------
A0A445L1X7/394-563          -------------------------------------------------FGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQL----------
A0A0D9X4J0/418-608          -----------------------------------DFGIRCFEGMQE-LYGIEPRVDHYSCMVDLLCRAGRLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLVEKDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLHLIHEKLDQLEEQMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKL--
J3MQF7/253-442              ----------------------------------CDFGIQCFKGMQE-LYGIKPRVDHYSCMVDLLCRAGRLERAVDLIRSMPFEPHPSAYGTLLSACRVYKNLEFAELAAGKLIEKDPQNAGAYVQLANIYAVANRWNDVSRVRRWMKDNAIVKTPGYSWIEIKGVMHEFRSNDRVHHQIHLIHEKLGQLEERIKAMGYVPDLDFALHDVDDSLKVQMLMRHSE----
A0A0E0QEG0/359-547          -----------------------------------DFGIRCFEGMQE-LYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSE----
A0A0E0EHZ7/355-543          -----------------------------------DFGIRYFEGMQE-LYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYAPDLDFVLHDVDETLKVQMLMRHSE----
A0A0E0G3Y8/349-537          -----------------------------------DFGIRCFEGMQE-LYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSE----
A2XRQ6/359-548              -----------------------------------DFGIQCFEGMQE-LYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEK---
A0A0E0HY25/358-547          ----------------------------------CDFGIQCFEGMQE-LYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSE----
A0A0E0HY26/359-547          -----------------------------------DFGIQCFEGMQE-LYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSE----
I1JX77/394-563              -------------------------------------------------FGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQL----------
#=GC scorecons              0000000000000000000000000000000000023643363363402656765469959799885999577596568669996966656979959878779665796784696736755965996979699456695795579649766587949969979754649497769759854236546534733557347757674557667563373545323220000
#=GC scorecons_70           _____________________________________*___*__*______***__***_******_***_**_*___******_***__*****_*********_*****_****_**__**_*********__*_*_**__***_***__***_********____*_***_**_**_______*___*____*__**_*_*___****_*__*_____________
#=GC scorecons_80           ____________________________________________________*____**_******_***_**_*___*__***_*_____*_**_****__*___**_**__*_*__*__*__**_***_**____*_**__**__**___***_**_*****____*_***_**_**___________*____*__**_*_*___*__*____*_____________
#=GC scorecons_90           _________________________________________________________**_*_****_***____*___*__***_*_____*_**_**____*____*_____*_______*__**_*_*_**____*__*___*__*____*_*_**_**_*_____*_*___*__**__________________________________________________
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